Initializing AMReX (26.06-31-g3c3bbaa34cd3)... MPI initialized with 4 MPI processes MPI initialized with thread support level 0 AMReX (26.06-31-g3c3bbaa34cd3) initialized ##### GEOMETRY PROPERTIES ##### ##### n_cell: 256 256 128 ##### prob_lo: -8.064e-09 -8.064e-09 0 ##### prob_hi: 8.064e-09 8.064e-09 5.65e-09 ##### max_grid_size: 128 128 128 ##### blocking_factor: 128 128 128 ##### is_periodic: 1 1 0 ##### coord_sys: 0 ##### embedded_boundary_flag: 0 ##### per per dir(0.0) ##### per per dir(-0.05) contains_SC = 1 ================================== P is initialized for a 3D problem. ================================== ========= Advance Steps ========== MLMG: Initial rhs = 160.2 MLMG: Initial residual (resid0) = 1771458250 MLMG: Final Iter. 11 resid, resid/resid0 = 0.03053890388, 1.723941497e-11 MLMG: Timers: Solve = 3.937648379 Iter = 3.451599714 Bottom = 0.000580045 1 iterations :: err = 1 MLMG: Initial rhs = 160.2029874 MLMG: Initial residual (resid0) = 1771458250 MLMG: Final Iter. 11 resid, resid/resid0 = 0.03053886529, 1.723939319e-11 MLMG: Timers: Solve = 3.482530958 Iter = 3.387787086 Bottom = 0.000565526 2 iterations :: err = 5.924791633e-08 Steady state check : (phi(t) - phi(t-1)).norm0() = 1 Advanced step 1 in 10.8006814 seconds MLMG: Initial rhs = 160.2029874 MLMG: Initial residual (resid0) = 1771458250 MLMG: Final Iter. 11 resid, resid/resid0 = 0.03053886529, 1.723939319e-11 MLMG: Timers: Solve = 3.449928014 Iter = 3.360410991 Bottom = 0.000558197 1 iterations :: err = 1 MLMG: Initial rhs = 160.2029874 MLMG: Initial residual (resid0) = 1771458250 MLMG: Final Iter. 11 resid, resid/resid0 = 0.03053886529, 1.723939319e-11 MLMG: Timers: Solve = 3.477961356 Iter = 3.365252424 Bottom = 0.000559112 2 iterations :: err = 0 Steady state check : (phi(t) - phi(t-1)).norm0() = 7.005588109e-17 Advanced step 2 in 10.24691181 seconds step = 2, Phi_Bc_hi = -0.1, num_Vapp = 1, sign = 1 MLMG: Initial rhs = 160.2029874 MLMG: Initial residual (resid0) = 3542916501 MLMG: Final Iter. 11 resid, resid/resid0 = 0.06107236427, 1.723787852e-11 MLMG: Timers: Solve = 3.524068045 Iter = 3.373794442 Bottom = 0.000589847 1 iterations :: err = 1 MLMG: Initial rhs = 160.2397814 MLMG: Initial residual (resid0) = 3542916501 MLMG: Final Iter. 11 resid, resid/resid0 = 0.06107227027, 1.723785199e-11 MLMG: Timers: Solve = 3.471921668 Iter = 3.372259898 Bottom = 0.000566574 2 iterations :: err = 1.841447951e-09 MLMG: Initial rhs = 160.2397814 MLMG: Initial residual (resid0) = 3542916501 MLMG: Final Iter. 11 resid, resid/resid0 = 0.06107227027, 1.723785199e-11 MLMG: Timers: Solve = 3.461024936 Iter = 3.368812501 Bottom = 0.000565359 1 iterations :: err = 1 MLMG: Initial rhs = 160.2397814 MLMG: Initial residual (resid0) = 3542916501 MLMG: Final Iter. 11 resid, resid/resid0 = 0.06107227027, 1.723785199e-11 MLMG: Timers: Solve = 3.491319403 Iter = 3.383967263 Bottom = 0.000580852 2 iterations :: err = 0 Steady state check : (phi(t) - phi(t-1)).norm0() = 0.4999990747 Advanced step 3 in 10.28353195 seconds High-water FAB megabyte spread across MPI nodes: [1331 ... 1331] Current FAB megabyte spread across MPI nodes: [1043 ... 1043] Total run time 44.25422552 seconds TinyProfiler total time across processes [min...avg...max]: 44.34 ... 44.34 ... 44.35 -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- MLABecLaplacian::Fsmooth() 4224 16.64 16.74 16.85 37.99% ComputePhi_Rho() 4 9.208 9.33 9.53 21.49% MLABecLaplacian::Fapply() 688 3.936 3.971 3.994 9.01% main() 1 1.43 1.464 1.547 3.49% FillBoundary_finish() 4418 1.023 1.247 1.457 3.28% FabArray::Xpay() 624 1.373 1.415 1.452 3.27% Calculate_Grad() 3 1.061 1.072 1.087 2.45% FillBoundary_nowait() 4418 0.9413 0.9535 0.9736 2.20% VisMF::Write(FabArray) 3 0.8462 0.8669 0.8924 2.01% FabArray::setVal() 890 0.8279 0.8641 0.8829 1.99% MLMG::addInterpCorrection() 528 0.8727 0.8776 0.8801 1.98% amrex::Copy() 179 0.7014 0.7126 0.72 1.62% Calculate_Landau() 3 0.6839 0.6872 0.6933 1.56% amrex::Add() 88 0.6562 0.6595 0.6636 1.50% WritePlotfile() 3 0.5723 0.5997 0.6441 1.45% amrex::average_down 576 0.5578 0.6007 0.6417 1.45% FabArray::norminf() 196 0.3998 0.4104 0.426 0.96% FabArray::ParallelCopy_finish() 416 0.1557 0.3182 0.3837 0.87% ComputeEfromPhi() 6 0.3703 0.3733 0.3763 0.85% MLCellLinOp::applyBC() 4912 0.2456 0.255 0.2665 0.60% CalculateTDGL_RHS() 3 0.131 0.1386 0.1455 0.33% FabArray::LinComb() 17 0.1273 0.1345 0.1453 0.33% MultiFab::OverlapMask() 8 0.1239 0.1326 0.137 0.31% average_down_faces 192 0.09253 0.09971 0.109 0.25% Calculate_Elec() 3 0.05592 0.06815 0.07732 0.17% WriteMultiLevelPlotfile() 3 0.02012 0.04034 0.06151 0.14% MLMG::ResNormInf() 96 0.01336 0.03046 0.05227 0.12% MLMG::prepareForSolve() 8 0.05002 0.05045 0.0514 0.12% MLMG::solve() 8 0.001207 0.003204 0.005747 0.01% MLCellLinOp::smooth() 1078 0.005314 0.005452 0.005647 0.01% FabArray::FillBoundary() 4418 0.004784 0.005155 0.005489 0.01% MLCellLinOp::apply() 688 0.001405 0.001503 0.001737 0.00% MLCellLinOp::correctionResidual() 528 0.001123 0.001217 0.001328 0.00% MLMG::mgVcycle_down::0 88 0.0008442 0.0008951 0.000971 0.00% MLMG:computeResOfCorrection() 528 0.0007524 0.0007819 0.0008195 0.00% MLMG::oneIter() 88 0.000644 0.0007082 0.0008112 0.00% MLMG::mgVcycle() 88 0.0007059 0.0007508 0.0007951 0.00% MLMG::mgVcycle_down::1 88 0.0006199 0.0006719 0.000751 0.00% MLCellLinOp::solutionResidual() 96 0.0005405 0.0005976 0.0007165 0.00% MLMG::mgVcycle_down::2 88 0.0002507 0.0003095 0.0004476 0.00% MLMG::mgVcycle_up::0 88 0.0003677 0.0003991 0.0004274 0.00% MLMG::computeResidual() 88 0.0003379 0.0003746 0.0004171 0.00% FabArray::ParallelCopy() 416 0.0002014 0.000213 0.000224 0.00% MLMG::mgVcycle_up::1 88 0.0001571 0.0001788 0.0002055 0.00% MLABecLaplacian::averageDownCoeffs() 8 0.0001418 0.0001518 0.0001626 0.00% MLMG::mgVcycle_up::2 88 7.268e-05 7.901e-05 8.739e-05 0.00% MLMG::computeMLResidual() 8 2.352e-05 2.474e-05 2.638e-05 0.00% MLABecLaplacian::prepareForSolve() 1 2.824e-06 4.18e-06 5.496e-06 0.00% Other 6695 0.1761 0.2072 0.2458 0.55% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- main() 1 44.34 44.34 44.34 99.99% ComputePhi_Rho() 4 38.1 38.12 38.14 86.01% MLMG::solve() 8 27.9 28.12 28.25 63.70% MLMG::oneIter() 88 24.04 24.06 24.07 54.28% MLMG::mgVcycle() 88 23.38 23.4 23.41 52.78% MLCellLinOp::smooth() 1078 18.49 18.52 18.56 41.85% MLABecLaplacian::Fsmooth() 4224 16.64 16.74 16.85 37.99% MLMG::mgVcycle_down::0 88 11.42 11.48 11.51 25.96% MLMG::mgVcycle_up::0 88 8.795 8.815 8.825 19.90% MLCellLinOp::apply() 688 4.42 4.514 4.606 10.39% MLABecLaplacian::Fapply() 688 3.936 3.971 3.994 9.01% MLCellLinOp::solutionResidual() 96 2.842 2.95 3.049 6.88% MLMG:computeResOfCorrection() 528 2.969 2.982 3.002 6.77% MLCellLinOp::correctionResidual() 528 2.968 2.981 3.001 6.77% MLMG::computeResidual() 88 2.61 2.645 2.667 6.01% MLCellLinOp::applyBC() 4912 2.15 2.314 2.503 5.64% FabArray::FillBoundary() 4418 1.978 2.209 2.418 5.45% WritePlotfile() 3 1.844 1.868 1.894 4.27% MLMG::mgVcycle_down::1 88 1.484 1.523 1.583 3.57% FillBoundary_finish() 4418 1.023 1.247 1.457 3.28% FabArray::Xpay() 624 1.373 1.415 1.452 3.27% MLMG::mgVcycle_up::1 88 1.206 1.208 1.211 2.73% Calculate_Grad() 3 1.061 1.072 1.087 2.45% amrex::average_down 576 0.7981 0.9125 0.9778 2.20% FillBoundary_nowait() 4418 0.9446 0.9568 0.9771 2.20% WriteMultiLevelPlotfile() 3 0.8974 0.9074 0.9214 2.08% VisMF::Write(FabArray) 3 0.8462 0.8669 0.8924 2.01% MLMG::addInterpCorrection() 528 0.8738 0.8856 0.8903 2.01% FabArray::setVal() 890 0.8279 0.8641 0.8829 1.99% MLMG::prepareForSolve() 8 0.5336 0.6867 0.7465 1.68% amrex::Copy() 179 0.7014 0.7126 0.72 1.62% Calculate_Landau() 3 0.6839 0.6872 0.6933 1.56% amrex::Add() 88 0.6562 0.6595 0.6636 1.50% MLABecLaplacian::averageDownCoeffs() 8 0.3133 0.4694 0.5339 1.20% MLMG::ResNormInf() 96 0.3618 0.3895 0.4268 0.96% FabArray::norminf() 196 0.3998 0.4104 0.426 0.96% FabArray::ParallelCopy() 416 0.1578 0.3201 0.3855 0.87% FabArray::ParallelCopy_finish() 416 0.1557 0.3182 0.3837 0.87% MLMG::computeMLResidual() 8 0.2329 0.3048 0.383 0.86% ComputeEfromPhi() 6 0.3703 0.3733 0.3763 0.85% MLABecLaplacian::prepareForSolve() 1 0.01322 0.2794 0.3712 0.84% CalculateTDGL_RHS() 3 0.166 0.1735 0.1815 0.41% MLMG::mgVcycle_down::2 88 0.1512 0.1541 0.1602 0.36% FabArray::LinComb() 17 0.1273 0.1345 0.1453 0.33% MultiFab::OverlapMask() 8 0.1239 0.1326 0.137 0.31% MLMG::mgVcycle_up::2 88 0.1319 0.1321 0.1322 0.30% average_down_faces 192 0.09281 0.09997 0.1093 0.25% Calculate_Elec() 3 0.05592 0.06815 0.07732 0.17% Other 6695 0.3138 0.3652 0.4261 0.96% -------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [MIS_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::amr.plot_file(nvals = 1) :: [MIS_plt] Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 4 0 B 0 B 0 B 8192 KiB 8192 KiB 8192 KiB Unprofiled 60 0 B 0 B 0 B 256 B 256 B 256 B -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------- main() 220 867 MiB 868 MiB 868 MiB 907 MiB 907 MiB 907 MiB WritePlotfile() 12 11 MiB 11 MiB 11 MiB 288 MiB 288 MiB 288 MiB MLMG::prepareForSolve() 91 83 MiB 83 MiB 83 MiB 91 MiB 91 MiB 91 MiB MLABecLaplacian::define() 88 71 MiB 71 MiB 71 MiB 73 MiB 73 MiB 73 MiB ComputePhi_Rho() 224 6647 KiB 6797 KiB 7179 KiB 64 MiB 64 MiB 64 MiB MultiFab::OverlapMask() 32 80 KiB 84 KiB 86 KiB 16 MiB 16 MiB 16 MiB BndryData::define() 48 1630 KiB 1630 KiB 1630 KiB 1687 KiB 1687 KiB 1687 KiB MLCellLinOp::defineAuxData() 264 1482 KiB 1484 KiB 1488 KiB 1534 KiB 1536 KiB 1541 KiB FillBoundary_nowait() 29200 38 KiB 43 KiB 47 KiB 1032 KiB 1032 KiB 1032 KiB MLCGSolver::bicgstab 440 0 B 0 B 0 B 0 B 832 B 3328 B FabArray::ParallelCopy_nowait() 832 4 B 4 B 5 B 768 B 1088 B 2048 B average_down_faces 120 0 B 0 B 0 B 768 B 768 B 768 B MLMG::addInterpCorrection() 440 0 B 0 B 0 B 512 B 512 B 512 B amrex::average_down 480 1 B 3 B 4 B 512 B 512 B 512 B MLCellLinOp::applyBC() 19648 1 B 1 B 1 B 256 B 256 B 256 B --------------------------------------------------------------------------------------------------------------- AMReX (26.06-31-g3c3bbaa34cd3) finalized