Initializing AMReX (26.07-41-g5ca2c5e23267)... MPI initialized with 4 MPI processes MPI initialized with thread support level 0 AMReX (26.07-41-g5ca2c5e23267) initialized ##### GEOMETRY PROPERTIES ##### ##### n_cell: 256 256 128 ##### prob_lo: -8.064e-09 -8.064e-09 0 ##### prob_hi: 8.064e-09 8.064e-09 5.65e-09 ##### max_grid_size: 128 128 128 ##### blocking_factor: 128 128 128 ##### is_periodic: 1 1 0 ##### coord_sys: 0 ##### embedded_boundary_flag: 0 ##### per per dir(0.0) ##### per per dir(-0.05) contains_SC = 1 ================================== P is initialized for a 3D problem. ================================== ========= Advance Steps ========== MLMG: Initial rhs = 160.2 MLMG: Initial residual (resid0) = 1771458250 MLMG: Final Iter. 11 resid, resid/resid0 = 0.03053890388, 1.723941497e-11 MLMG: Timers: Solve = 3.935486447 Iter = 3.420213285 Bottom = 0.000642436 1 iterations :: err = 1 MLMG: Initial rhs = 160.2029874 MLMG: Initial residual (resid0) = 1771458250 MLMG: Final Iter. 11 resid, resid/resid0 = 0.03053886529, 1.723939319e-11 MLMG: Timers: Solve = 3.525334544 Iter = 3.404301222 Bottom = 0.000551881 2 iterations :: err = 5.924791633e-08 Steady state check : (phi(t) - phi(t-1)).norm0() = 1 Advanced step 1 in 10.78186661 seconds MLMG: Initial rhs = 160.2029874 MLMG: Initial residual (resid0) = 1771458250 MLMG: Final Iter. 11 resid, resid/resid0 = 0.03053886529, 1.723939319e-11 MLMG: Timers: Solve = 3.455874181 Iter = 3.356767979 Bottom = 0.000548795 1 iterations :: err = 1 MLMG: Initial rhs = 160.2029874 MLMG: Initial residual (resid0) = 1771458250 MLMG: Final Iter. 11 resid, resid/resid0 = 0.03053886529, 1.723939319e-11 MLMG: Timers: Solve = 3.456790998 Iter = 3.365567718 Bottom = 0.000547675 2 iterations :: err = 0 Steady state check : (phi(t) - phi(t-1)).norm0() = 7.005588109e-17 Advanced step 2 in 10.24330543 seconds step = 2, Phi_Bc_hi = -0.1, num_Vapp = 1, sign = 1 MLMG: Initial rhs = 160.2029874 MLMG: Initial residual (resid0) = 3542916501 MLMG: Final Iter. 11 resid, resid/resid0 = 0.06107236427, 1.723787852e-11 MLMG: Timers: Solve = 3.457476595 Iter = 3.365052007 Bottom = 0.000563566 1 iterations :: err = 1 MLMG: Initial rhs = 160.2397814 MLMG: Initial residual (resid0) = 3542916501 MLMG: Final Iter. 11 resid, resid/resid0 = 0.06107227027, 1.723785199e-11 MLMG: Timers: Solve = 3.479773223 Iter = 3.361108177 Bottom = 0.000554379 2 iterations :: err = 1.841447951e-09 MLMG: Initial rhs = 160.2397814 MLMG: Initial residual (resid0) = 3542916501 MLMG: Final Iter. 11 resid, resid/resid0 = 0.06107227027, 1.723785199e-11 MLMG: Timers: Solve = 3.551019755 Iter = 3.457611397 Bottom = 0.000606838 1 iterations :: err = 1 MLMG: Initial rhs = 160.2397814 MLMG: Initial residual (resid0) = 3542916501 MLMG: Final Iter. 11 resid, resid/resid0 = 0.06107227027, 1.723785199e-11 MLMG: Timers: Solve = 3.474998643 Iter = 3.381279491 Bottom = 0.000619467 2 iterations :: err = 0 Steady state check : (phi(t) - phi(t-1)).norm0() = 0.4999990747 Advanced step 3 in 10.36764067 seconds High-water FAB megabyte spread across MPI nodes: [1331 ... 1331] Current FAB megabyte spread across MPI nodes: [1043 ... 1043] Total run time 44.24351417 seconds TinyProfiler total time across processes [min...avg...max]: 44.33 ... 44.33 ... 44.34 -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- MLABecLaplacian::Fsmooth() 4224 16.66 16.77 16.95 38.23% ComputePhi_Rho() 4 9.073 9.233 9.505 21.44% MLABecLaplacian::Fapply() 688 3.952 3.984 4.005 9.03% main() 1 1.465 1.522 1.641 3.70% FabArray::Xpay() 624 1.35 1.413 1.458 3.29% FillBoundary_finish() 4418 1.091 1.26 1.357 3.06% Calculate_Grad() 3 1.048 1.052 1.053 2.37% FillBoundary_nowait() 4418 0.9517 0.9549 0.9598 2.16% VisMF::Write(FabArray) 3 0.7847 0.8459 0.9141 2.06% FabArray::setVal() 890 0.8242 0.8683 0.8932 2.01% MLMG::addInterpCorrection() 528 0.8664 0.8717 0.8814 1.99% amrex::Copy() 179 0.7058 0.7303 0.7397 1.67% Calculate_Landau() 3 0.6757 0.6788 0.6802 1.53% amrex::Add() 88 0.6609 0.6621 0.6634 1.50% amrex::average_down 576 0.5237 0.5615 0.6522 1.47% WritePlotfile() 3 0.5707 0.5909 0.6404 1.44% FabArray::ParallelCopy_finish() 416 0.05895 0.3277 0.4297 0.97% FabArray::norminf() 196 0.3984 0.4088 0.4251 0.96% ComputeEfromPhi() 6 0.3883 0.3896 0.3929 0.89% MLCellLinOp::applyBC() 4912 0.2512 0.261 0.27 0.61% FabArray::LinComb() 17 0.1374 0.1394 0.1421 0.32% CalculateTDGL_RHS() 3 0.1389 0.14 0.1407 0.32% MultiFab::OverlapMask() 8 0.1267 0.1284 0.1313 0.30% average_down_faces 192 0.08792 0.0955 0.09882 0.22% MLABecLaplacian::define() 1 0.06663 0.0697 0.07691 0.17% Calculate_Elec() 3 0.07488 0.07535 0.07624 0.17% MLMG::prepareForSolve() 8 0.05055 0.05375 0.06091 0.14% MLMG::ResNormInf() 96 0.006285 0.02661 0.04857 0.11% WriteMultiLevelPlotfile() 3 0.008448 0.02928 0.04304 0.10% MLCellLinOp::smooth() 1078 0.00537 0.005774 0.006018 0.01% MLMG::solve() 8 0.001399 0.003438 0.005751 0.01% FabArray::FillBoundary() 4418 0.004927 0.005111 0.005466 0.01% MLCellLinOp::apply() 688 0.001416 0.001479 0.001603 0.00% MLCellLinOp::correctionResidual() 528 0.00107 0.001261 0.001418 0.00% MLMG::mgVcycle_down::0 88 0.0007826 0.0008394 0.000916 0.00% MLMG:computeResOfCorrection() 528 0.0007048 0.000774 0.0008223 0.00% MLMG::mgVcycle() 88 0.0007032 0.0007471 0.0007958 0.00% MLMG::mgVcycle_down::1 88 0.000659 0.0007179 0.0007828 0.00% MLMG::oneIter() 88 0.0005877 0.0006235 0.00067 0.00% MLCellLinOp::solutionResidual() 96 0.0005298 0.0005878 0.0006472 0.00% MLMG::mgVcycle_up::0 88 0.0003856 0.0004007 0.0004322 0.00% MLMG::computeResidual() 88 0.0003199 0.0003548 0.0003794 0.00% MLMG::mgVcycle_down::2 88 0.0002562 0.0002844 0.0003234 0.00% FabArray::ParallelCopy() 416 0.0002029 0.0002147 0.0002299 0.00% MLMG::mgVcycle_up::1 88 0.0001651 0.000192 0.0002107 0.00% MLABecLaplacian::averageDownCoeffs() 8 0.000141 0.0001524 0.0001609 0.00% MLMG::mgVcycle_up::2 88 7.263e-05 7.817e-05 8.497e-05 0.00% MLMG::computeMLResidual() 8 1.867e-05 2.717e-05 3.247e-05 0.00% MLABecLaplacian::prepareForSolve() 1 2.815e-06 3.663e-06 4.189e-06 0.00% Other 6694 0.1253 0.1672 0.2024 0.46% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- main() 1 44.33 44.33 44.33 99.98% ComputePhi_Rho() 4 38.03 38.05 38.08 85.89% MLMG::solve() 8 27.86 28.15 28.27 63.76% MLMG::oneIter() 88 24.09 24.12 24.15 54.46% MLMG::mgVcycle() 88 23.43 23.46 23.49 52.97% MLCellLinOp::smooth() 1078 18.55 18.59 18.66 42.07% MLABecLaplacian::Fsmooth() 4224 16.66 16.77 16.95 38.23% MLMG::mgVcycle_down::0 88 11.46 11.48 11.52 25.98% MLMG::mgVcycle_up::0 88 8.78 8.808 8.836 19.93% MLCellLinOp::apply() 688 4.483 4.494 4.523 10.20% MLABecLaplacian::Fapply() 688 3.952 3.984 4.005 9.03% MLMG:computeResOfCorrection() 528 2.957 3.007 3.036 6.85% MLCellLinOp::correctionResidual() 528 2.957 3.006 3.035 6.85% MLCellLinOp::solutionResidual() 96 2.878 2.903 2.919 6.58% MLMG::computeResidual() 88 2.6 2.637 2.681 6.05% MLCellLinOp::applyBC() 4912 2.182 2.327 2.426 5.47% FabArray::FillBoundary() 4418 2.053 2.224 2.326 5.25% WritePlotfile() 3 1.777 1.838 1.904 4.29% MLMG::mgVcycle_down::1 88 1.515 1.558 1.582 3.57% FabArray::Xpay() 624 1.35 1.413 1.458 3.29% FillBoundary_finish() 4418 1.091 1.26 1.357 3.06% MLMG::mgVcycle_up::1 88 1.217 1.219 1.221 2.75% amrex::average_down 576 0.5808 0.882 1.073 2.42% Calculate_Grad() 3 1.048 1.052 1.053 2.37% FillBoundary_nowait() 4418 0.9551 0.9584 0.9638 2.17% WriteMultiLevelPlotfile() 3 0.8186 0.8753 0.9577 2.16% VisMF::Write(FabArray) 3 0.7847 0.8459 0.9141 2.06% FabArray::setVal() 890 0.8242 0.8683 0.8932 2.01% MLMG::addInterpCorrection() 528 0.8771 0.8806 0.8851 2.00% MLMG::prepareForSolve() 8 0.4467 0.7153 0.8165 1.84% amrex::Copy() 179 0.7058 0.7303 0.7397 1.67% Calculate_Landau() 3 0.6757 0.6788 0.6802 1.53% amrex::Add() 88 0.6609 0.6621 0.6634 1.50% MLABecLaplacian::averageDownCoeffs() 8 0.2027 0.4747 0.5771 1.30% FabArray::ParallelCopy() 416 0.06116 0.3296 0.4314 0.97% FabArray::ParallelCopy_finish() 416 0.05895 0.3277 0.4297 0.97% FabArray::norminf() 196 0.3984 0.4088 0.4251 0.96% MLMG::ResNormInf() 96 0.3534 0.3838 0.422 0.95% MLABecLaplacian::prepareForSolve() 1 0.02219 0.2954 0.4034 0.91% ComputeEfromPhi() 6 0.3883 0.3896 0.3929 0.89% MLMG::computeMLResidual() 8 0.2383 0.2662 0.2947 0.66% CalculateTDGL_RHS() 3 0.1768 0.1782 0.1803 0.41% MLMG::mgVcycle_down::2 88 0.1608 0.1637 0.1674 0.38% FabArray::LinComb() 17 0.1374 0.1394 0.1421 0.32% MLMG::mgVcycle_up::2 88 0.1362 0.1369 0.1373 0.31% MultiFab::OverlapMask() 8 0.1267 0.1284 0.1313 0.30% average_down_faces 192 0.08822 0.09576 0.0991 0.22% MLABecLaplacian::define() 1 0.07089 0.07435 0.08146 0.18% Calculate_Elec() 3 0.07488 0.07535 0.07624 0.17% Other 6694 0.2652 0.328 0.3879 0.87% -------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [MIS_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::amr.plot_file(nvals = 1) :: [MIS_plt] Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 4 0 B 0 B 0 B 8192 KiB 8192 KiB 8192 KiB Unprofiled 60 0 B 0 B 0 B 256 B 256 B 256 B -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------- main() 220 866 MiB 867 MiB 867 MiB 907 MiB 907 MiB 907 MiB WritePlotfile() 12 11 MiB 11 MiB 11 MiB 288 MiB 288 MiB 288 MiB MLMG::prepareForSolve() 91 83 MiB 83 MiB 83 MiB 91 MiB 91 MiB 91 MiB MLABecLaplacian::define() 88 71 MiB 71 MiB 71 MiB 73 MiB 73 MiB 73 MiB ComputePhi_Rho() 224 6636 KiB 6803 KiB 7180 KiB 64 MiB 64 MiB 64 MiB MultiFab::OverlapMask() 32 75 KiB 85 KiB 92 KiB 16 MiB 16 MiB 16 MiB BndryData::define() 48 1628 KiB 1628 KiB 1628 KiB 1687 KiB 1687 KiB 1687 KiB MLCellLinOp::defineAuxData() 264 1480 KiB 1482 KiB 1487 KiB 1534 KiB 1536 KiB 1541 KiB FillBoundary_nowait() 29200 38 KiB 42 KiB 45 KiB 1032 KiB 1032 KiB 1032 KiB MLCGSolver::bicgstab 440 0 B 0 B 0 B 0 B 832 B 3328 B FabArray::ParallelCopy_nowait() 832 2 B 3 B 4 B 768 B 1088 B 2048 B average_down_faces 120 0 B 0 B 0 B 768 B 768 B 768 B MLMG::addInterpCorrection() 440 0 B 0 B 0 B 512 B 512 B 512 B amrex::average_down 480 0 B 3 B 4 B 512 B 512 B 512 B MLCellLinOp::applyBC() 19648 1 B 1 B 1 B 256 B 256 B 256 B --------------------------------------------------------------------------------------------------------------- AMReX (26.07-41-g5ca2c5e23267) finalized