Initializing AMReX (26.07-55-gd1b9e4ec5555)... MPI initialized with 4 MPI processes MPI initialized with thread support level 0 AMReX (26.07-55-gd1b9e4ec5555) initialized ##### GEOMETRY PROPERTIES ##### ##### n_cell: 256 256 128 ##### prob_lo: -8.064e-09 -8.064e-09 0 ##### prob_hi: 8.064e-09 8.064e-09 5.65e-09 ##### max_grid_size: 128 128 128 ##### blocking_factor: 128 128 128 ##### is_periodic: 1 1 0 ##### coord_sys: 0 ##### embedded_boundary_flag: 0 ##### per per dir(0.0) ##### per per dir(-0.05) contains_SC = 1 ================================== P is initialized for a 3D problem. ================================== ========= Advance Steps ========== MLMG: Initial rhs = 160.2 MLMG: Initial residual (resid0) = 1771458250 MLMG: Final Iter. 11 resid, resid/resid0 = 0.03053890388, 1.723941497e-11 MLMG: Timers: Solve = 3.800905156 Iter = 3.444106558 Bottom = 0.000552086 1 iterations :: err = 1 MLMG: Initial rhs = 160.2029874 MLMG: Initial residual (resid0) = 1771458250 MLMG: Final Iter. 11 resid, resid/resid0 = 0.03053886529, 1.723939319e-11 MLMG: Timers: Solve = 3.520532715 Iter = 3.403829019 Bottom = 0.000535238 2 iterations :: err = 5.924791633e-08 Steady state check : (phi(t) - phi(t-1)).norm0() = 1 Advanced step 1 in 10.71584833 seconds MLMG: Initial rhs = 160.2029874 MLMG: Initial residual (resid0) = 1771458250 MLMG: Final Iter. 11 resid, resid/resid0 = 0.03053886529, 1.723939319e-11 MLMG: Timers: Solve = 3.481800489 Iter = 3.385326148 Bottom = 0.000541315 1 iterations :: err = 1 MLMG: Initial rhs = 160.2029874 MLMG: Initial residual (resid0) = 1771458250 MLMG: Final Iter. 11 resid, resid/resid0 = 0.03053886529, 1.723939319e-11 MLMG: Timers: Solve = 3.495032786 Iter = 3.387442238 Bottom = 0.00056126 2 iterations :: err = 0 Steady state check : (phi(t) - phi(t-1)).norm0() = 7.005588109e-17 Advanced step 2 in 10.27378584 seconds step = 2, Phi_Bc_hi = -0.1, num_Vapp = 1, sign = 1 MLMG: Initial rhs = 160.2029874 MLMG: Initial residual (resid0) = 3542916501 MLMG: Final Iter. 11 resid, resid/resid0 = 0.06107236427, 1.723787852e-11 MLMG: Timers: Solve = 3.481255922 Iter = 3.370068577 Bottom = 0.000727117 1 iterations :: err = 1 MLMG: Initial rhs = 160.2397814 MLMG: Initial residual (resid0) = 3542916501 MLMG: Final Iter. 11 resid, resid/resid0 = 0.06107227027, 1.723785199e-11 MLMG: Timers: Solve = 3.488907836 Iter = 3.393246052 Bottom = 0.00054695 2 iterations :: err = 1.841447951e-09 MLMG: Initial rhs = 160.2397814 MLMG: Initial residual (resid0) = 3542916501 MLMG: Final Iter. 11 resid, resid/resid0 = 0.06107227027, 1.723785199e-11 MLMG: Timers: Solve = 3.524493329 Iter = 3.424054787 Bottom = 0.000545119 1 iterations :: err = 1 MLMG: Initial rhs = 160.2397814 MLMG: Initial residual (resid0) = 3542916501 MLMG: Final Iter. 11 resid, resid/resid0 = 0.06107227027, 1.723785199e-11 MLMG: Timers: Solve = 3.525036302 Iter = 3.41975937 Bottom = 0.000613365 2 iterations :: err = 0 Steady state check : (phi(t) - phi(t-1)).norm0() = 0.4999990747 Advanced step 3 in 10.36855405 seconds High-water FAB megabyte spread across MPI nodes: [1331 ... 1331] Current FAB megabyte spread across MPI nodes: [1043 ... 1043] Total run time 44.64959003 seconds TinyProfiler total time across processes [min...avg...max]: 44.73 ... 44.73 ... 44.73 -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- MLABecLaplacian::Fsmooth() 4224 16.7 16.81 17 38.00% ComputePhi_Rho() 4 9.275 9.347 9.542 21.33% MLABecLaplacian::Fapply() 688 3.975 4 4.037 9.02% FillBoundary_finish() 4418 1.163 1.402 1.693 3.78% main() 1 1.411 1.447 1.528 3.42% FabArray::Xpay() 624 1.393 1.416 1.453 3.25% Calculate_Grad() 3 1.058 1.063 1.066 2.38% FillBoundary_nowait() 4418 0.9101 0.9279 0.9416 2.11% MLMG::addInterpCorrection() 528 0.8795 0.8815 0.8836 1.98% FabArray::setVal() 890 0.822 0.8493 0.8679 1.94% VisMF::Write(FabArray) 3 0.8513 0.8549 0.8601 1.92% amrex::Copy() 179 0.7 0.7099 0.7188 1.61% Calculate_Landau() 3 0.6855 0.6908 0.6943 1.55% amrex::average_down 576 0.5481 0.6096 0.6655 1.49% amrex::Add() 88 0.6589 0.6607 0.6644 1.49% WritePlotfile() 3 0.5617 0.5885 0.6363 1.42% WriteMultiLevelPlotfile() 3 0.001952 0.3137 0.4407 0.99% FabArray::norminf() 196 0.4017 0.4095 0.4181 0.93% UtilCreateCleanDirectory() 6 4.299e-06 0.1029 0.4116 0.92% ComputeEfromPhi() 6 0.3743 0.3757 0.3766 0.84% FabArray::ParallelCopy_finish() 416 0.03324 0.1129 0.33 0.74% MLCellLinOp::applyBC() 4912 0.2475 0.2528 0.2582 0.58% FabArray::LinComb() 17 0.1339 0.1389 0.142 0.32% CalculateTDGL_RHS() 3 0.138 0.1396 0.142 0.32% MultiFab::OverlapMask() 8 0.1341 0.1379 0.1403 0.31% average_down_faces 192 0.09172 0.09748 0.1021 0.23% Calculate_Elec() 3 0.06784 0.07485 0.07861 0.18% MLMG::prepareForSolve() 8 0.04668 0.04784 0.04887 0.11% MLMG::ResNormInf() 96 0.008711 0.02871 0.04319 0.10% MLMG::solve() 8 0.002827 0.004032 0.006203 0.01% MLCellLinOp::smooth() 1078 0.004955 0.005299 0.005575 0.01% FabArray::FillBoundary() 4418 0.004728 0.005062 0.005426 0.01% MLCellLinOp::apply() 688 0.001332 0.001442 0.001532 0.00% MLCellLinOp::correctionResidual() 528 0.001049 0.00119 0.001291 0.00% MLMG::mgVcycle() 88 0.0007191 0.0007964 0.0009819 0.00% MLMG::mgVcycle_down::0 88 0.000695 0.0008452 0.000966 0.00% MLMG:computeResOfCorrection() 528 0.0007632 0.0008052 0.0008739 0.00% MLMG::oneIter() 88 0.0005372 0.0006124 0.0006892 0.00% MLCellLinOp::solutionResidual() 96 0.0004882 0.0005802 0.0006806 0.00% MLMG::mgVcycle_down::1 88 0.0006231 0.0006404 0.0006503 0.00% MLMG::computeResidual() 88 0.000323 0.000382 0.00043 0.00% MLMG::mgVcycle_up::0 88 0.0003502 0.0003806 0.0004102 0.00% MLMG::mgVcycle_down::2 88 0.0002759 0.000285 0.000292 0.00% FabArray::ParallelCopy() 416 0.0002021 0.0002124 0.0002248 0.00% MLMG::mgVcycle_up::1 88 0.0001585 0.0001717 0.0001873 0.00% MLABecLaplacian::averageDownCoeffs() 8 0.0001314 0.0001402 0.0001535 0.00% MLMG::mgVcycle_up::2 88 6.933e-05 7.611e-05 8.22e-05 0.00% MLMG::computeMLResidual() 8 1.931e-05 2.271e-05 2.394e-05 0.00% MLABecLaplacian::prepareForSolve() 1 2.519e-06 3.078e-06 4.375e-06 0.00% Other 6689 0.1912 0.2167 0.2546 0.57% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- main() 1 44.73 44.73 44.73 100.00% ComputePhi_Rho() 4 38.16 38.16 38.16 85.32% MLMG::solve() 8 27.97 28.16 28.24 63.13% MLMG::oneIter() 88 24.2 24.22 24.24 54.20% MLMG::mgVcycle() 88 23.54 23.55 23.58 52.72% MLCellLinOp::smooth() 1078 18.61 18.64 18.68 41.76% MLABecLaplacian::Fsmooth() 4224 16.7 16.81 17 38.00% MLMG::mgVcycle_down::0 88 11.48 11.54 11.58 25.89% MLMG::mgVcycle_up::0 88 8.856 8.873 8.898 19.89% MLCellLinOp::apply() 688 4.453 4.627 4.769 10.66% MLABecLaplacian::Fapply() 688 3.975 4 4.037 9.02% MLCellLinOp::solutionResidual() 96 2.873 3.044 3.179 7.11% MLMG:computeResOfCorrection() 528 2.978 3.002 3.016 6.74% MLCellLinOp::correctionResidual() 528 2.977 3.001 3.016 6.74% MLCellLinOp::applyBC() 4912 2.243 2.454 2.731 6.11% MLMG::computeResidual() 88 2.638 2.655 2.686 6.01% FabArray::FillBoundary() 4418 2.113 2.338 2.637 5.90% WritePlotfile() 3 2.223 2.227 2.237 5.00% FillBoundary_finish() 4418 1.163 1.402 1.693 3.78% MLMG::mgVcycle_down::1 88 1.516 1.557 1.618 3.62% FabArray::Xpay() 624 1.393 1.416 1.453 3.25% WriteMultiLevelPlotfile() 3 1.242 1.271 1.295 2.89% MLMG::mgVcycle_up::1 88 1.208 1.21 1.211 2.71% Calculate_Grad() 3 1.058 1.063 1.066 2.38% amrex::average_down 576 0.5839 0.716 0.9962 2.23% FillBoundary_nowait() 4418 0.9133 0.9312 0.9451 2.11% MLMG::addInterpCorrection() 528 0.8807 0.8897 0.8944 2.00% FabArray::setVal() 890 0.822 0.8493 0.8679 1.94% VisMF::Write(FabArray) 3 0.8513 0.8549 0.8601 1.92% amrex::Copy() 179 0.7 0.7099 0.7188 1.61% MLMG::prepareForSolve() 8 0.393 0.4821 0.7001 1.57% Calculate_Landau() 3 0.6855 0.6908 0.6943 1.55% amrex::Add() 88 0.6589 0.6607 0.6644 1.49% MLMG::computeMLResidual() 8 0.2359 0.3892 0.5265 1.18% MLABecLaplacian::averageDownCoeffs() 8 0.185 0.2613 0.4776 1.07% FabArray::norminf() 196 0.4017 0.4095 0.4181 0.93% UtilCreateCleanDirectory() 6 4.299e-06 0.1029 0.4116 0.92% MLMG::ResNormInf() 96 0.3588 0.3865 0.4095 0.92% ComputeEfromPhi() 6 0.3743 0.3757 0.3766 0.84% FabArray::ParallelCopy() 416 0.03512 0.1148 0.3322 0.74% FabArray::ParallelCopy_finish() 416 0.03324 0.1129 0.33 0.74% MLABecLaplacian::prepareForSolve() 1 0.01322 0.07596 0.2606 0.58% CalculateTDGL_RHS() 3 0.1731 0.1766 0.1807 0.40% MLMG::mgVcycle_down::2 88 0.1563 0.1589 0.1612 0.36% FabArray::LinComb() 17 0.1339 0.1389 0.142 0.32% MultiFab::OverlapMask() 8 0.1341 0.1379 0.1403 0.31% MLMG::mgVcycle_up::2 88 0.1326 0.1331 0.1338 0.30% average_down_faces 192 0.09197 0.0977 0.1023 0.23% Calculate_Elec() 3 0.06784 0.07485 0.07861 0.18% Other 6689 0.3261 0.3653 0.4211 0.94% -------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [MIS_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::amr.plot_file(nvals = 1) :: [MIS_plt] Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 4 0 B 0 B 0 B 8192 KiB 8192 KiB 8192 KiB Unprofiled 60 0 B 0 B 0 B 256 B 256 B 256 B -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------- main() 220 868 MiB 868 MiB 868 MiB 907 MiB 907 MiB 907 MiB WritePlotfile() 12 13 MiB 13 MiB 13 MiB 288 MiB 288 MiB 288 MiB MLMG::prepareForSolve() 91 82 MiB 82 MiB 83 MiB 91 MiB 91 MiB 91 MiB MLABecLaplacian::define() 88 71 MiB 71 MiB 71 MiB 73 MiB 73 MiB 73 MiB ComputePhi_Rho() 224 6553 KiB 6605 KiB 6736 KiB 64 MiB 64 MiB 64 MiB MultiFab::OverlapMask() 32 81 KiB 85 KiB 91 KiB 16 MiB 16 MiB 16 MiB BndryData::define() 48 1631 KiB 1631 KiB 1631 KiB 1687 KiB 1687 KiB 1687 KiB MLCellLinOp::defineAuxData() 264 1483 KiB 1485 KiB 1490 KiB 1534 KiB 1536 KiB 1541 KiB FillBoundary_nowait() 29200 40 KiB 45 KiB 51 KiB 1032 KiB 1032 KiB 1032 KiB MLCGSolver::bicgstab 440 0 B 0 B 0 B 0 B 832 B 3328 B FabArray::ParallelCopy_nowait() 832 0 B 2 B 11 B 768 B 1088 B 2048 B average_down_faces 120 0 B 0 B 0 B 768 B 768 B 768 B MLMG::addInterpCorrection() 440 0 B 0 B 0 B 512 B 512 B 512 B amrex::average_down 480 0 B 0 B 3 B 512 B 512 B 512 B MLCellLinOp::applyBC() 19648 1 B 1 B 1 B 256 B 256 B 256 B --------------------------------------------------------------------------------------------------------------- AMReX (26.07-55-gd1b9e4ec5555) finalized