Initializing AMReX (26.08-26-g2cf4fbcde02a)... MPI initialized with 4 MPI processes MPI initialized with thread support level 0 AMReX (26.08-26-g2cf4fbcde02a) initialized ##### GEOMETRY PROPERTIES ##### ##### n_cell: 256 256 128 ##### prob_lo: -8.064e-09 -8.064e-09 0 ##### prob_hi: 8.064e-09 8.064e-09 5.65e-09 ##### max_grid_size: 128 128 128 ##### blocking_factor: 128 128 128 ##### is_periodic: 1 1 0 ##### coord_sys: 0 ##### embedded_boundary_flag: 0 ##### per per dir(0.0) ##### per per dir(-0.05) contains_SC = 1 ================================== P is initialized for a 3D problem. ================================== ========= Advance Steps ========== MLMG: Initial rhs = 160.2 MLMG: Initial residual (resid0) = 1771458250 MLMG: Final Iter. 11 resid, resid/resid0 = 0.03053890388, 1.723941497e-11 MLMG: Timers: Solve = 3.506396429 Iter = 3.355838263 Bottom = 0.000583696 1 iterations :: err = 1 MLMG: Initial rhs = 160.2029874 MLMG: Initial residual (resid0) = 1771458250 MLMG: Final Iter. 11 resid, resid/resid0 = 0.03053886529, 1.723939319e-11 MLMG: Timers: Solve = 3.458358116 Iter = 3.364378674 Bottom = 0.00057824 2 iterations :: err = 5.924791633e-08 Steady state check : (phi(t) - phi(t-1)).norm0() = 1 Advanced step 1 in 10.38849678 seconds MLMG: Initial rhs = 160.2029874 MLMG: Initial residual (resid0) = 1771458250 MLMG: Final Iter. 11 resid, resid/resid0 = 0.03053886529, 1.723939319e-11 MLMG: Timers: Solve = 3.462423416 Iter = 3.368404077 Bottom = 0.000578925 1 iterations :: err = 1 MLMG: Initial rhs = 160.2029874 MLMG: Initial residual (resid0) = 1771458250 MLMG: Final Iter. 11 resid, resid/resid0 = 0.03053886529, 1.723939319e-11 MLMG: Timers: Solve = 3.479052294 Iter = 3.365763099 Bottom = 0.00057572 2 iterations :: err = 0 Steady state check : (phi(t) - phi(t-1)).norm0() = 7.005588109e-17 Advanced step 2 in 10.24626923 seconds step = 2, Phi_Bc_hi = -0.1, num_Vapp = 1, sign = 1 MLMG: Initial rhs = 160.2029874 MLMG: Initial residual (resid0) = 3542916501 MLMG: Final Iter. 11 resid, resid/resid0 = 0.06107236427, 1.723787852e-11 MLMG: Timers: Solve = 3.454100988 Iter = 3.354847862 Bottom = 0.000640783 1 iterations :: err = 1 MLMG: Initial rhs = 160.2397814 MLMG: Initial residual (resid0) = 3542916501 MLMG: Final Iter. 11 resid, resid/resid0 = 0.06107227027, 1.723785199e-11 MLMG: Timers: Solve = 3.473937436 Iter = 3.371400103 Bottom = 0.00056789 2 iterations :: err = 1.841447951e-09 MLMG: Initial rhs = 160.2397814 MLMG: Initial residual (resid0) = 3542916501 MLMG: Final Iter. 11 resid, resid/resid0 = 0.06107227027, 1.723785199e-11 MLMG: Timers: Solve = 3.495624872 Iter = 3.393256627 Bottom = 0.000709977 1 iterations :: err = 1 MLMG: Initial rhs = 160.2397814 MLMG: Initial residual (resid0) = 3542916501 MLMG: Final Iter. 11 resid, resid/resid0 = 0.06107227027, 1.723785199e-11 MLMG: Timers: Solve = 3.49849884 Iter = 3.390254609 Bottom = 0.000581905 2 iterations :: err = 0 Steady state check : (phi(t) - phi(t-1)).norm0() = 0.4999990747 Advanced step 3 in 10.31675779 seconds High-water FAB megabyte spread across MPI nodes: [1331 ... 1331] Current FAB megabyte spread across MPI nodes: [1043 ... 1043] Total run time 43.60924293 seconds TinyProfiler total time across processes [min...avg...max]: 43.68 ... 43.68 ... 43.68 -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- MLABecLaplacian::Fsmooth() 4224 16.39 16.66 16.91 38.72% ComputePhi_Rho() 4 9.176 9.201 9.22 21.11% MLABecLaplacian::Fapply() 688 3.94 3.97 4.022 9.21% FabArray::Xpay() 624 1.367 1.424 1.471 3.37% FillBoundary_finish() 4418 0.9131 1.183 1.433 3.28% main() 1 1.328 1.355 1.385 3.17% Calculate_Grad() 3 1.056 1.063 1.073 2.46% FabArray::setVal() 890 0.8943 0.9135 0.935 2.14% VisMF::Write(FabArray) 3 0.8205 0.8773 0.9322 2.13% FillBoundary_nowait() 4418 0.8167 0.8708 0.91 2.08% MLMG::addInterpCorrection() 528 0.8804 0.8871 0.8919 2.04% amrex::Copy() 179 0.7152 0.7275 0.7357 1.68% Calculate_Landau() 3 0.6724 0.6763 0.6827 1.56% amrex::average_down 576 0.5576 0.6385 0.6737 1.54% amrex::Add() 88 0.6538 0.6613 0.6659 1.52% WritePlotfile() 3 0.5303 0.5525 0.5861 1.34% FabArray::norminf() 196 0.4039 0.4133 0.4364 1.00% ComputeEfromPhi() 6 0.3728 0.3754 0.3789 0.87% MLCellLinOp::applyBC() 4912 0.24 0.252 0.2719 0.62% CalculateTDGL_RHS() 3 0.138 0.1437 0.1498 0.34% FabArray::LinComb() 17 0.1368 0.1414 0.1491 0.34% MultiFab::OverlapMask() 8 0.1289 0.1304 0.1328 0.30% average_down_faces 192 0.09659 0.1048 0.1163 0.27% Calculate_Elec() 3 0.07015 0.07425 0.07981 0.18% MultiFab::norm1 8 0.03364 0.05077 0.0734 0.17% FabArray::ParallelCopy_finish() 416 0.04457 0.05413 0.06988 0.16% MLMG::prepareForSolve() 8 0.05281 0.05404 0.05606 0.13% MLMG::ResNormInf() 96 0.005021 0.02697 0.05036 0.12% WriteMultiLevelPlotfile() 3 0.004163 0.02928 0.0467 0.11% MLMG::solve() 8 0.001017 0.003214 0.005963 0.01% MLCellLinOp::smooth() 1078 0.005029 0.005396 0.005757 0.01% FabArray::FillBoundary() 4418 0.004991 0.005208 0.005474 0.01% MLCellLinOp::apply() 688 0.001339 0.001517 0.001707 0.00% MLCellLinOp::correctionResidual() 528 0.0012 0.001251 0.00128 0.00% MLMG::mgVcycle_down::0 88 0.0007848 0.0008457 0.000942 0.00% MLMG::mgVcycle() 88 0.0007065 0.000772 0.0009022 0.00% MLMG:computeResOfCorrection() 528 0.0007453 0.0008234 0.000897 0.00% MLMG::oneIter() 88 0.00055 0.0006484 0.000775 0.00% MLMG::mgVcycle_down::1 88 0.0006181 0.0006551 0.0006828 0.00% MLCellLinOp::solutionResidual() 96 0.0004773 0.0005859 0.0006572 0.00% MLMG::computeResidual() 88 0.0003052 0.0003716 0.0004453 0.00% MLMG::mgVcycle_up::0 88 0.0003707 0.0003948 0.0004231 0.00% MLMG::mgVcycle_down::2 88 0.0002569 0.0002827 0.0003087 0.00% FabArray::ParallelCopy() 416 0.0002154 0.0002293 0.0002515 0.00% MLMG::mgVcycle_up::1 88 0.0001559 0.0001677 0.0001867 0.00% MLABecLaplacian::averageDownCoeffs() 8 0.0001573 0.0001652 0.0001759 0.00% MLMG::mgVcycle_up::2 88 7.384e-05 7.648e-05 7.932e-05 0.00% MLMG::computeMLResidual() 8 2.216e-05 2.608e-05 3.032e-05 0.00% Other 6688 0.1344 0.1457 0.1595 0.37% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- main() 1 43.68 43.68 43.68 100.00% ComputePhi_Rho() 4 37.6 37.62 37.64 86.17% MLMG::solve() 8 27.72 27.74 27.75 63.52% MLMG::oneIter() 88 23.93 23.97 24.01 54.96% MLMG::mgVcycle() 88 23.27 23.31 23.35 53.44% MLCellLinOp::smooth() 1078 18.28 18.39 18.48 42.30% MLABecLaplacian::Fsmooth() 4224 16.39 16.66 16.91 38.72% MLMG::mgVcycle_down::0 88 11.37 11.45 11.5 26.33% MLMG::mgVcycle_up::0 88 8.737 8.77 8.805 20.16% MLCellLinOp::apply() 688 4.398 4.457 4.521 10.35% MLABecLaplacian::Fapply() 688 3.94 3.97 4.022 9.21% MLMG:computeResOfCorrection() 528 2.949 2.981 3.027 6.93% MLCellLinOp::correctionResidual() 528 2.948 2.98 3.026 6.93% MLCellLinOp::solutionResidual() 96 2.818 2.902 2.968 6.79% MLMG::computeResidual() 88 2.585 2.634 2.683 6.14% MLCellLinOp::applyBC() 4912 1.898 2.204 2.464 5.64% FabArray::FillBoundary() 4418 1.738 2.062 2.351 5.38% WritePlotfile() 3 1.77 1.828 1.884 4.31% MLMG::mgVcycle_down::1 88 1.47 1.516 1.602 3.67% FabArray::Xpay() 624 1.367 1.424 1.471 3.37% FillBoundary_finish() 4418 0.9131 1.183 1.433 3.28% MLMG::mgVcycle_up::1 88 1.19 1.193 1.196 2.74% Calculate_Grad() 3 1.056 1.063 1.073 2.46% WriteMultiLevelPlotfile() 3 0.8672 0.9067 0.9558 2.19% FabArray::setVal() 890 0.8943 0.9135 0.935 2.14% VisMF::Write(FabArray) 3 0.8205 0.8773 0.9322 2.13% FillBoundary_nowait() 4418 0.8198 0.8742 0.9132 2.09% MLMG::addInterpCorrection() 528 0.8925 0.8967 0.9039 2.07% amrex::Copy() 179 0.7152 0.7275 0.7357 1.68% amrex::average_down 576 0.6031 0.685 0.729 1.67% Calculate_Landau() 3 0.6724 0.6763 0.6827 1.56% amrex::Add() 88 0.6538 0.6613 0.6659 1.52% MLMG::prepareForSolve() 8 0.4374 0.4459 0.4604 1.05% FabArray::norminf() 196 0.4039 0.4133 0.4364 1.00% MLMG::ResNormInf() 96 0.3574 0.3883 0.4344 0.99% ComputeEfromPhi() 6 0.3728 0.3754 0.3789 0.87% MLMG::computeMLResidual() 8 0.2331 0.2681 0.2857 0.65% MLABecLaplacian::averageDownCoeffs() 8 0.2014 0.2116 0.2245 0.51% CalculateTDGL_RHS() 3 0.1789 0.1819 0.1868 0.43% MLMG::mgVcycle_down::2 88 0.1519 0.1547 0.1564 0.36% FabArray::LinComb() 17 0.1368 0.1414 0.1491 0.34% MultiFab::OverlapMask() 8 0.1289 0.1304 0.1328 0.30% MLMG::mgVcycle_up::2 88 0.1315 0.1318 0.1322 0.30% average_down_faces 192 0.09688 0.105 0.1166 0.27% Calculate_Elec() 3 0.07015 0.07425 0.07981 0.18% MultiFab::norm1 8 0.03364 0.05077 0.0734 0.17% FabArray::ParallelCopy() 416 0.04653 0.05635 0.07318 0.17% FabArray::ParallelCopy_finish() 416 0.04457 0.05413 0.06988 0.16% Other 6688 0.2909 0.3239 0.3699 0.85% -------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [MIS_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::amr.plot_file(nvals = 1) :: [MIS_plt] Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 4 0 B 0 B 0 B 8192 KiB 8192 KiB 8192 KiB Unprofiled 60 0 B 0 B 0 B 256 B 256 B 256 B -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------- main() 220 868 MiB 868 MiB 868 MiB 907 MiB 907 MiB 907 MiB WritePlotfile() 12 11 MiB 11 MiB 12 MiB 288 MiB 288 MiB 288 MiB MLMG::prepareForSolve() 91 83 MiB 83 MiB 83 MiB 91 MiB 91 MiB 91 MiB MLABecLaplacian::define() 88 71 MiB 71 MiB 71 MiB 73 MiB 73 MiB 73 MiB ComputePhi_Rho() 224 6701 KiB 6718 KiB 6729 KiB 64 MiB 64 MiB 64 MiB MultiFab::OverlapMask() 32 79 KiB 85 KiB 94 KiB 16 MiB 16 MiB 16 MiB BndryData::define() 48 1633 KiB 1633 KiB 1633 KiB 1687 KiB 1687 KiB 1687 KiB MLCellLinOp::defineAuxData() 264 1485 KiB 1487 KiB 1492 KiB 1534 KiB 1536 KiB 1541 KiB FillBoundary_nowait() 29200 33 KiB 40 KiB 47 KiB 1032 KiB 1032 KiB 1032 KiB MLCGSolver::bicgstab 440 0 B 0 B 0 B 0 B 832 B 3328 B FabArray::ParallelCopy_nowait() 832 0 B 0 B 2 B 768 B 1088 B 2048 B average_down_faces 120 0 B 0 B 0 B 768 B 768 B 768 B MLMG::addInterpCorrection() 440 0 B 0 B 0 B 512 B 512 B 512 B amrex::average_down 480 0 B 0 B 0 B 512 B 512 B 512 B MLCellLinOp::applyBC() 19648 1 B 1 B 1 B 256 B 256 B 256 B --------------------------------------------------------------------------------------------------------------- AMReX (26.08-26-g2cf4fbcde02a) finalized