Initializing AMReX (26.04-100-g9aaff4128aa5)... MPI initialized with 4 MPI processes MPI initialized with thread support level 3 AMReX (26.04-100-g9aaff4128aa5) initialized WarpX (8eb71b6317a0) _____ __ .__ / _ \________/ |_ ____ _____ |__| ______ / /_\ \_ __ \ __\/ __ \ / \| |/ ___/ / | \ | \/| | \ ___/| Y Y \ |\___ \ \____|__ /__| |__| \___ >__|_| /__/____ > \/ \/ \/ \/ Level 0: dt = 7.703332806e-16 ; dx = 5e-07 ; dy = 5e-07 ; dz = 5e-07 --- INFO : we are in init data of macro Grids Summary: Level 0 4 grids 2097152 cells 100 % of domain smallest grid: 128 x 64 x 64 biggest grid: 128 x 64 x 64 ------------------------------------------------------------------------------- --------------------------- MAIN EM PIC PARAMETERS ---------------------------- ------------------------------------------------------------------------------- Precision: | DOUBLE Particle precision: | DOUBLE Geometry: | 3D (XYZ) Operation mode: | Electromagnetic | - macroscopic | - Lax-Wendroff algorithm ------------------------------------------------------------------------------- Current Deposition: | Esirkepov Particle Pusher: | Boris Charge Deposition: | standard Field Gathering: | energy-conserving Particle Shape Factor:| 0 ------------------------------------------------------------------------------- Maxwell Solver: | Yee ------------------------------------------------------------------------------- For full input parameters, see the file: warpx_used_inputs --- INFO : Writing plotfile diags/plt000000 STEP 1 starts ... Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [roger_pec_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.TP(nvals = 1) :: [5.4545e-10] [TOP]::my_constants.dx(nvals = 3) :: [Lx, /, nx] [TOP]::my_constants.dy(nvals = 3) :: [Ly, /, ny] [TOP]::my_constants.dz(nvals = 3) :: [Lz, /, nz] [TOP]::my_constants.eps_r_nb(nvals = 1) :: [13.] [TOP]::my_constants.flag_none(nvals = 1) :: [0] [TOP]::my_constants.flag_ss(nvals = 1) :: [2] [TOP]::my_constants.mu_r_nb(nvals = 1) :: [1.0] [TOP]::my_constants.sigma_nb(nvals = 1) :: [1.e7] [TOP]::plt(nvals = 1) :: [roger_pec_plt] **** WARNINGS ****************************************************************** * GLOBAL warning list after [ FIRST STEP ] * * --> [! ] [Species] [raised 4 times] * particles.nspecies is ignored. Just use particles.species_names please. * @ Raised by: ALL * ******************************************************************************** STEP 1 ends. TIME = 7.703332806e-16 DT = 7.703332806e-16 Evolve time = 0.887609885 s; This step = 0.887609885 s; Avg. per step = 0.887609885 s STEP 2 starts ... STEP 2 ends. TIME = 1.540666561e-15 DT = 7.703332806e-16 Evolve time = 1.508780482 s; This step = 0.621170597 s; Avg. per step = 0.754390241 s STEP 3 starts ... STEP 3 ends. TIME = 2.310999842e-15 DT = 7.703332806e-16 Evolve time = 2.194378003 s; This step = 0.685597521 s; Avg. per step = 0.7314593343 s --- INFO : Writing plotfile diags/plt000003 Total Time : 2.590532954 TinyProfiler total time across processes [min...avg...max]: 2.594 ... 2.598 ... 2.6 -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- WarpX::OneStep_nosub() 3 1.051 1.073 1.102 42.40% FabArray::setVal() 177 0.3205 0.332 0.3424 13.17% WarpX::MacroscopicEvolveE() 3 0.2867 0.3138 0.3418 13.15% amrex::Copy() 144 0.2478 0.2561 0.2668 10.26% FabArray::ParallelCopy_finish() 144 0.0149 0.07575 0.1341 5.16% FabArray::LinComb() 72 0.07674 0.09738 0.1177 4.53% FabArray::ParallelCopy_nowait() 144 0.09234 0.09469 0.09777 3.76% WarpX::EvolveB() 6 0.07996 0.08504 0.09052 3.48% sample::Coarsen() 12 0.08695 0.08735 0.08773 3.37% FillBoundary_finish() 144 0.008439 0.03581 0.06086 2.34% WarpX::InitData() 1 0.0329 0.03625 0.03952 1.52% VisMF::Write(FabArray) 2 0.03408 0.03453 0.03536 1.36% PML::Exchange 72 0.02218 0.02301 0.02439 0.94% FillBoundary_nowait() 144 0.0155 0.01989 0.02417 0.93% WarpX::DampPML() 3 0.008785 0.01144 0.01664 0.64% DistributionMapping::LeastUsedCPUs() 1 1.234e-05 0.002879 0.005749 0.22% main() 1 0.001468 0.001849 0.002351 0.09% WriteMultiLevelPlotfile() 2 0.0006103 0.001178 0.001842 0.07% FlushFormatPlotfile::WriteToFile() 2 3.189e-05 0.0002112 0.0007278 0.03% WarpX::Evolve::step 3 0.0002099 0.0003401 0.0005417 0.02% FabArray::ParallelCopy() 144 0.0003421 0.000411 0.0005164 0.02% ablastr::utils::communication::ParallelCopy 144 0.0003742 0.0004262 0.0004716 0.02% ablastr::utils::communication::FillBoundary 144 0.0002367 0.000248 0.0002646 0.01% MultiFab::Copy() 72 0.0002146 0.0002378 0.0002526 0.01% FabArray::FillBoundary() 126 0.0001406 0.0001478 0.0001618 0.01% Diagnostics::FilterComputePackFlush() 5 8.912e-05 0.0001017 0.0001179 0.00% ablastr::utils::communication::OverrideSync 18 1.876e-05 2.515e-05 2.849e-05 0.00% FAbArray::OverrideSync() 18 1.594e-05 1.904e-05 2.257e-05 0.00% OverrideSync_finish() 18 1.024e-05 1.117e-05 1.188e-05 0.00% AmrMesh::MakeDistributionMap() 1 1.67e-06 3.08e-06 5.918e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 2.748e-06 3.449e-06 4.366e-06 0.00% WarpX::Evolve() 1 1.968e-06 2.92e-06 4.012e-06 0.00% REG::WarpX::Evolve() 1 2.017e-06 2.566e-06 3.102e-06 0.00% Other 437 0.001275 0.003385 0.005267 0.20% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- main() 1 2.585 2.588 2.591 99.63% REG::WarpX::Evolve() 1 2.318 2.318 2.319 89.18% WarpX::Evolve() 1 2.318 2.318 2.319 89.18% WarpX::Evolve::step 3 2.194 2.195 2.195 84.44% WarpX::OneStep_nosub() 3 1.927 1.927 1.927 74.13% PML::Exchange 72 0.7603 0.8083 0.853 32.81% FabArray::setVal() 177 0.3205 0.332 0.3424 13.17% WarpX::MacroscopicEvolveE() 3 0.2867 0.3138 0.3418 13.15% Diagnostics::FilterComputePackFlush() 5 0.2663 0.2772 0.2892 11.12% WarpX::InitData() 1 0.2647 0.2676 0.2703 10.39% amrex::Copy() 144 0.2478 0.2561 0.2668 10.26% ablastr::utils::communication::ParallelCopy 144 0.1125 0.1721 0.2282 8.78% FabArray::ParallelCopy() 144 0.1121 0.1717 0.2278 8.76% MultiFab::Copy() 72 0.1221 0.1277 0.1344 5.17% FabArray::ParallelCopy_finish() 144 0.0149 0.07575 0.1341 5.16% FabArray::LinComb() 72 0.07674 0.09738 0.1177 4.53% FabArray::ParallelCopy_nowait() 144 0.09323 0.09554 0.09885 3.80% WarpX::EvolveB() 6 0.07996 0.08504 0.09052 3.48% sample::Coarsen() 12 0.08695 0.08735 0.08773 3.37% FillBoundary_finish() 144 0.008439 0.03581 0.06086 2.34% ablastr::utils::communication::OverrideSync 18 0.003058 0.02691 0.04801 1.85% FAbArray::OverrideSync() 18 0.003039 0.02689 0.04799 1.85% OverrideSync_finish() 18 0.002341 0.02624 0.04741 1.82% FlushFormatPlotfile::WriteToFile() 2 0.03522 0.03597 0.03691 1.42% WriteMultiLevelPlotfile() 2 0.03519 0.03576 0.03618 1.39% VisMF::Write(FabArray) 2 0.03408 0.03453 0.03536 1.36% ablastr::utils::communication::FillBoundary 144 0.02906 0.02974 0.0305 1.17% FabArray::FillBoundary() 126 0.02593 0.02693 0.02807 1.08% FillBoundary_nowait() 144 0.01595 0.02035 0.02463 0.95% WarpX::DampPML() 3 0.008785 0.01144 0.01664 0.64% AmrMesh::MakeDistributionMap() 1 2.505e-05 0.002888 0.005757 0.22% DistributionMapping::SFCProcessorMapDoIt() 1 2.027e-05 0.002885 0.005754 0.22% DistributionMapping::LeastUsedCPUs() 1 1.234e-05 0.002879 0.005749 0.22% Other 437 0.006705 0.01511 0.02234 0.86% -------------------------------------------------------------------------------------------- BEGIN REGION WarpX::Evolve() -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- WarpX::OneStep_nosub() 3 1.051 1.073 1.102 42.40% WarpX::MacroscopicEvolveE() 3 0.2867 0.3138 0.3418 13.15% amrex::Copy() 132 0.2291 0.237 0.2465 9.48% FabArray::setVal() 132 0.2308 0.2313 0.2319 8.92% FabArray::LinComb() 66 0.0707 0.09031 0.1095 4.21% FabArray::ParallelCopy_finish() 132 0.008981 0.05683 0.1014 3.90% WarpX::EvolveB() 6 0.07996 0.08504 0.09052 3.48% FabArray::ParallelCopy_nowait() 132 0.08451 0.08686 0.08997 3.46% FillBoundary_finish() 132 0.007902 0.03488 0.05957 2.29% sample::Coarsen() 6 0.038 0.03817 0.0386 1.48% FillBoundary_nowait() 132 0.01425 0.0183 0.02223 0.85% PML::Exchange 66 0.01927 0.02006 0.02158 0.83% VisMF::Write(FabArray) 1 0.01733 0.0176 0.01803 0.69% WriteMultiLevelPlotfile() 1 1.442e-05 0.0005728 0.0008345 0.03% WarpX::Evolve::step 3 0.0002099 0.0003401 0.0005417 0.02% FabArray::ParallelCopy() 132 0.0003129 0.0003815 0.0004799 0.02% ablastr::utils::communication::ParallelCopy 132 0.0003487 0.0003999 0.0004434 0.02% FlushFormatPlotfile::WriteToFile() 1 1.193e-05 7.4e-05 0.000251 0.01% ablastr::utils::communication::FillBoundary 132 0.0002202 0.0002305 0.0002472 0.01% MultiFab::Copy() 66 0.000202 0.0002251 0.0002391 0.01% FabArray::FillBoundary() 114 0.0001312 0.0001379 0.0001515 0.01% Diagnostics::FilterComputePackFlush() 4 5.149e-05 5.668e-05 6.583e-05 0.00% ablastr::utils::communication::OverrideSync 18 1.876e-05 2.515e-05 2.849e-05 0.00% FAbArray::OverrideSync() 18 1.594e-05 1.904e-05 2.257e-05 0.00% OverrideSync_finish() 18 1.024e-05 1.117e-05 1.188e-05 0.00% WarpX::Evolve() 1 1.968e-06 2.92e-06 4.012e-06 0.00% REG::WarpX::Evolve() 1 2.017e-06 2.566e-06 3.102e-06 0.00% Other 371 0.009638 0.01249 0.01799 0.69% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- REG::WarpX::Evolve() 1 2.318 2.318 2.319 89.18% WarpX::Evolve() 1 2.318 2.318 2.319 89.18% WarpX::Evolve::step 3 2.194 2.195 2.195 84.44% WarpX::OneStep_nosub() 3 1.927 1.927 1.927 74.13% PML::Exchange 66 0.6865 0.724 0.7585 29.17% WarpX::MacroscopicEvolveE() 3 0.2867 0.3138 0.3418 13.15% amrex::Copy() 132 0.2291 0.237 0.2465 9.48% FabArray::setVal() 132 0.2308 0.2313 0.2319 8.92% ablastr::utils::communication::ParallelCopy 132 0.09861 0.1451 0.1875 7.21% FabArray::ParallelCopy() 132 0.09824 0.1447 0.1871 7.20% MultiFab::Copy() 66 0.1141 0.1194 0.1252 4.82% Diagnostics::FilterComputePackFlush() 4 0.1229 0.1233 0.1239 4.76% FabArray::LinComb() 66 0.0707 0.09031 0.1095 4.21% FabArray::ParallelCopy_finish() 132 0.008981 0.05683 0.1014 3.90% FabArray::ParallelCopy_nowait() 132 0.08501 0.0875 0.09078 3.49% WarpX::EvolveB() 6 0.07996 0.08504 0.09052 3.48% FillBoundary_finish() 132 0.007902 0.03488 0.05957 2.29% ablastr::utils::communication::OverrideSync 18 0.003058 0.02691 0.04801 1.85% FAbArray::OverrideSync() 18 0.003039 0.02689 0.04799 1.85% OverrideSync_finish() 18 0.002341 0.02624 0.04741 1.82% sample::Coarsen() 6 0.038 0.03817 0.0386 1.48% ablastr::utils::communication::FillBoundary 132 0.02636 0.02705 0.02782 1.07% FabArray::FillBoundary() 114 0.02325 0.02426 0.02541 0.98% FillBoundary_nowait() 132 0.01456 0.01861 0.02251 0.87% FlushFormatPlotfile::WriteToFile() 1 0.01806 0.01827 0.01848 0.71% WriteMultiLevelPlotfile() 1 0.01805 0.0182 0.01846 0.71% VisMF::Write(FabArray) 1 0.01733 0.0176 0.01803 0.69% Other 371 0.01458 0.01831 0.0249 0.96% -------------------------------------------------------------------------------------------- END REGION WarpX::Evolve() Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [roger_pec_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.TP(nvals = 1) :: [5.4545e-10] [TOP]::my_constants.dx(nvals = 3) :: [Lx, /, nx] [TOP]::my_constants.dy(nvals = 3) :: [Ly, /, ny] [TOP]::my_constants.dz(nvals = 3) :: [Lz, /, nz] [TOP]::my_constants.eps_r_nb(nvals = 1) :: [13.] [TOP]::my_constants.flag_none(nvals = 1) :: [0] [TOP]::my_constants.flag_ss(nvals = 1) :: [2] [TOP]::my_constants.mu_r_nb(nvals = 1) :: [1.0] [TOP]::my_constants.sigma_nb(nvals = 1) :: [1.e7] [TOP]::plt(nvals = 1) :: [roger_pec_plt] Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 4 4 B 6 B 9 B 8192 KiB 8192 KiB 8192 KiB main() 280 3301 B 3307 B 3310 B 3584 B 3584 B 3584 B WarpX::OneStep_nosub() 24 2214 B 2215 B 2218 B 2560 B 2560 B 2560 B WarpX::InitData() 12 734 B 736 B 739 B 768 B 768 B 768 B Unprofiled 88 0 B 0 B 0 B 256 B 256 B 256 B -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------- WarpX::InitData() 286 151 MiB 166 MiB 182 MiB 155 MiB 171 MiB 187 MiB PML::Exchange 1296 3150 KiB 3243 KiB 3322 KiB 10 MiB 10 MiB 11 MiB FillBoundary_nowait() 1074 3501 B 4298 B 5431 B 391 KiB 394 KiB 395 KiB FabArray::ParallelCopy_nowait() 1152 3043 B 3282 B 3477 B 86 KiB 104 KiB 122 KiB --------------------------------------------------------------------------------------------------------------- AMReX (26.04-100-g9aaff4128aa5) finalized