Initializing AMReX (26.04-105-g0b56ec9a168c)... MPI initialized with 4 MPI processes MPI initialized with thread support level 3 AMReX (26.04-105-g0b56ec9a168c) initialized WarpX (8eb71b6317a0) _____ __ .__ / _ \________/ |_ ____ _____ |__| ______ / /_\ \_ __ \ __\/ __ \ / \| |/ ___/ / | \ | \/| | \ ___/| Y Y \ |\___ \ \____|__ /__| |__| \___ >__|_| /__/____ > \/ \/ \/ \/ Level 0: dt = 7.703332806e-16 ; dx = 5e-07 ; dy = 5e-07 ; dz = 5e-07 --- INFO : we are in init data of macro Grids Summary: Level 0 4 grids 2097152 cells 100 % of domain smallest grid: 128 x 64 x 64 biggest grid: 128 x 64 x 64 ------------------------------------------------------------------------------- --------------------------- MAIN EM PIC PARAMETERS ---------------------------- ------------------------------------------------------------------------------- Precision: | DOUBLE Particle precision: | DOUBLE Geometry: | 3D (XYZ) Operation mode: | Electromagnetic | - macroscopic | - Lax-Wendroff algorithm ------------------------------------------------------------------------------- Current Deposition: | Esirkepov Particle Pusher: | Boris Charge Deposition: | standard Field Gathering: | energy-conserving Particle Shape Factor:| 0 ------------------------------------------------------------------------------- Maxwell Solver: | Yee ------------------------------------------------------------------------------- For full input parameters, see the file: warpx_used_inputs --- INFO : Writing plotfile diags/plt000000 STEP 1 starts ... Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [roger_pec_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.TP(nvals = 1) :: [5.4545e-10] [TOP]::my_constants.dx(nvals = 3) :: [Lx, /, nx] [TOP]::my_constants.dy(nvals = 3) :: [Ly, /, ny] [TOP]::my_constants.dz(nvals = 3) :: [Lz, /, nz] [TOP]::my_constants.eps_r_nb(nvals = 1) :: [13.] [TOP]::my_constants.flag_none(nvals = 1) :: [0] [TOP]::my_constants.flag_ss(nvals = 1) :: [2] [TOP]::my_constants.mu_r_nb(nvals = 1) :: [1.0] [TOP]::my_constants.sigma_nb(nvals = 1) :: [1.e7] [TOP]::plt(nvals = 1) :: [roger_pec_plt] **** WARNINGS ****************************************************************** * GLOBAL warning list after [ FIRST STEP ] * * --> [! ] [Species] [raised 4 times] * particles.nspecies is ignored. Just use particles.species_names please. * @ Raised by: ALL * ******************************************************************************** STEP 1 ends. TIME = 7.703332806e-16 DT = 7.703332806e-16 Evolve time = 0.890825705 s; This step = 0.890825705 s; Avg. per step = 0.890825705 s STEP 2 starts ... STEP 2 ends. TIME = 1.540666561e-15 DT = 7.703332806e-16 Evolve time = 1.51196799 s; This step = 0.621142285 s; Avg. per step = 0.755983995 s STEP 3 starts ... STEP 3 ends. TIME = 2.310999842e-15 DT = 7.703332806e-16 Evolve time = 2.200287924 s; This step = 0.688319934 s; Avg. per step = 0.733429308 s --- INFO : Writing plotfile diags/plt000003 Total Time : 2.602697234 TinyProfiler total time across processes [min...avg...max]: 2.605 ... 2.61 ... 2.615 -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- WarpX::OneStep_nosub() 3 0.996 1.053 1.128 43.13% FabArray::setVal() 177 0.3294 0.3351 0.342 13.08% WarpX::MacroscopicEvolveE() 3 0.2948 0.317 0.3358 12.84% amrex::Copy() 144 0.2506 0.2577 0.2652 10.14% FabArray::ParallelCopy_finish() 144 0.02802 0.07443 0.1298 4.96% FabArray::LinComb() 72 0.07687 0.09806 0.1182 4.52% FillBoundary_finish() 144 0.01343 0.05996 0.1107 4.23% FabArray::ParallelCopy_nowait() 144 0.09468 0.09525 0.09613 3.68% sample::Coarsen() 12 0.08926 0.08962 0.09053 3.46% WarpX::EvolveB() 6 0.07421 0.08021 0.08546 3.27% WarpX::InitData() 1 0.03302 0.0361 0.0389 1.49% VisMF::Write(FabArray) 2 0.03401 0.03437 0.03519 1.35% PML::Exchange 72 0.02076 0.02281 0.02537 0.97% FillBoundary_nowait() 144 0.01555 0.01998 0.02432 0.93% WarpX::DampPML() 3 0.006488 0.01016 0.01384 0.53% DistributionMapping::LeastUsedCPUs() 1 1.341e-05 0.004058 0.008046 0.31% main() 1 0.002142 0.002477 0.003057 0.12% WriteMultiLevelPlotfile() 2 3.572e-05 0.001238 0.002001 0.08% FlushFormatPlotfile::WriteToFile() 2 3.616e-05 0.0001852 0.000623 0.02% ablastr::utils::communication::ParallelCopy 144 0.0003714 0.0004566 0.0005697 0.02% FabArray::ParallelCopy() 144 0.0003345 0.0004154 0.0005202 0.02% WarpX::Evolve::step 3 0.0001671 0.0002958 0.0004595 0.02% MultiFab::Copy() 72 0.0002256 0.0002602 0.0003288 0.01% ablastr::utils::communication::FillBoundary 144 0.0002173 0.0002516 0.0002689 0.01% FabArray::FillBoundary() 126 0.0001418 0.0001446 0.0001468 0.01% Diagnostics::FilterComputePackFlush() 5 8.934e-05 0.0001015 0.0001201 0.00% ablastr::utils::communication::OverrideSync 18 1.421e-05 2.268e-05 2.867e-05 0.00% FAbArray::OverrideSync() 18 1.579e-05 1.854e-05 2.049e-05 0.00% ParticleContainer::Redistribute_impl() 1 8.528e-06 1.297e-05 1.666e-05 0.00% AmrMesh::MakeDistributionMap() 1 2.785e-06 9.432e-06 1.504e-05 0.00% OverrideSync_finish() 18 8.613e-06 1.118e-05 1.302e-05 0.00% ParticleCopyPlan::build 1 3.866e-06 6.757e-06 9.034e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.457e-06 4.871e-06 5.182e-06 0.00% WarpX::Evolve() 1 2.14e-06 2.6e-06 2.87e-06 0.00% REG::WarpX::Evolve() 1 1.943e-06 2.361e-06 2.759e-06 0.00% Other 435 0.001326 0.005289 0.009192 0.35% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- main() 1 2.595 2.599 2.603 99.54% REG::WarpX::Evolve() 1 2.325 2.325 2.325 88.93% WarpX::Evolve() 1 2.325 2.325 2.325 88.93% WarpX::Evolve::step 3 2.2 2.201 2.201 84.18% WarpX::OneStep_nosub() 3 1.932 1.932 1.933 73.91% PML::Exchange 72 0.776 0.809 0.8506 32.53% FabArray::setVal() 177 0.3294 0.3351 0.342 13.08% WarpX::MacroscopicEvolveE() 3 0.2948 0.317 0.3358 12.84% Diagnostics::FilterComputePackFlush() 5 0.2648 0.2753 0.2865 10.96% WarpX::InitData() 1 0.2671 0.2714 0.2752 10.52% amrex::Copy() 144 0.2506 0.2577 0.2652 10.14% ablastr::utils::communication::ParallelCopy 144 0.1258 0.1714 0.2264 8.66% FabArray::ParallelCopy() 144 0.1254 0.171 0.2258 8.64% MultiFab::Copy() 72 0.1261 0.131 0.137 5.24% FabArray::ParallelCopy_finish() 144 0.02802 0.07443 0.1298 4.96% FabArray::LinComb() 72 0.07687 0.09806 0.1182 4.52% FillBoundary_finish() 144 0.01343 0.05996 0.1107 4.23% ablastr::utils::communication::OverrideSync 18 0.0007926 0.05102 0.09805 3.75% FAbArray::OverrideSync() 18 0.0007784 0.051 0.09802 3.75% OverrideSync_finish() 18 0.0003115 0.05035 0.09743 3.73% FabArray::ParallelCopy_nowait() 144 0.09557 0.09612 0.09697 3.71% sample::Coarsen() 12 0.08926 0.08962 0.09053 3.46% WarpX::EvolveB() 6 0.07421 0.08021 0.08546 3.27% FlushFormatPlotfile::WriteToFile() 2 0.03562 0.03585 0.03606 1.38% WriteMultiLevelPlotfile() 2 0.03544 0.03566 0.03601 1.38% VisMF::Write(FabArray) 2 0.03401 0.03437 0.03519 1.35% ablastr::utils::communication::FillBoundary 144 0.02917 0.02988 0.03041 1.16% FabArray::FillBoundary() 126 0.02598 0.02707 0.02809 1.07% FillBoundary_nowait() 144 0.01603 0.02045 0.02479 0.95% WarpX::DampPML() 3 0.006488 0.01016 0.01384 0.53% AmrMesh::MakeDistributionMap() 1 2.821e-05 0.004074 0.008055 0.31% DistributionMapping::SFCProcessorMapDoIt() 1 1.987e-05 0.004065 0.008052 0.31% DistributionMapping::LeastUsedCPUs() 1 1.341e-05 0.004058 0.008046 0.31% ParticleContainer::Redistribute_impl() 1 0.0001249 0.003837 0.007364 0.28% ParticleCopyPlan::build 1 3.519e-05 0.003729 0.007255 0.28% Other 435 0.00634 0.01513 0.02366 0.90% -------------------------------------------------------------------------------------------- BEGIN REGION WarpX::Evolve() -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- WarpX::OneStep_nosub() 3 0.996 1.053 1.128 43.13% WarpX::MacroscopicEvolveE() 3 0.2948 0.317 0.3358 12.84% amrex::Copy() 132 0.2304 0.2373 0.2438 9.32% FabArray::setVal() 132 0.2309 0.2321 0.2331 8.91% FillBoundary_finish() 132 0.01238 0.05911 0.1094 4.18% FabArray::LinComb() 66 0.07039 0.09004 0.1085 4.15% FabArray::ParallelCopy_finish() 132 0.02386 0.06026 0.1041 3.98% FabArray::ParallelCopy_nowait() 132 0.08684 0.0873 0.08826 3.38% WarpX::EvolveB() 6 0.07421 0.08021 0.08546 3.27% sample::Coarsen() 6 0.03908 0.03926 0.03969 1.52% PML::Exchange 66 0.01807 0.02011 0.02245 0.86% FillBoundary_nowait() 132 0.01413 0.01835 0.02241 0.86% VisMF::Write(FabArray) 1 0.01724 0.01741 0.0178 0.68% WriteMultiLevelPlotfile() 1 1.675e-05 0.0005774 0.0009281 0.04% ablastr::utils::communication::ParallelCopy 132 0.000348 0.0004315 0.0005444 0.02% FabArray::ParallelCopy() 132 0.0003116 0.0003872 0.0004862 0.02% WarpX::Evolve::step 3 0.0001671 0.0002958 0.0004595 0.02% MultiFab::Copy() 66 0.0002125 0.0002469 0.0003162 0.01% ablastr::utils::communication::FillBoundary 132 0.000201 0.0002321 0.0002488 0.01% FlushFormatPlotfile::WriteToFile() 1 1.225e-05 7.354e-05 0.0002476 0.01% FabArray::FillBoundary() 114 0.0001288 0.0001338 0.0001369 0.01% Diagnostics::FilterComputePackFlush() 4 4.927e-05 5.23e-05 5.641e-05 0.00% ablastr::utils::communication::OverrideSync 18 1.421e-05 2.268e-05 2.867e-05 0.00% FAbArray::OverrideSync() 18 1.579e-05 1.854e-05 2.049e-05 0.00% OverrideSync_finish() 18 8.613e-06 1.118e-05 1.302e-05 0.00% WarpX::Evolve() 1 2.14e-06 2.6e-06 2.87e-06 0.00% REG::WarpX::Evolve() 1 1.943e-06 2.361e-06 2.759e-06 0.00% Other 371 0.007372 0.01122 0.01514 0.58% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- REG::WarpX::Evolve() 1 2.325 2.325 2.325 88.93% WarpX::Evolve() 1 2.325 2.325 2.325 88.93% WarpX::Evolve::step 3 2.2 2.201 2.201 84.18% WarpX::OneStep_nosub() 3 1.932 1.932 1.933 73.91% PML::Exchange 66 0.7055 0.7288 0.7602 29.07% WarpX::MacroscopicEvolveE() 3 0.2948 0.317 0.3358 12.84% amrex::Copy() 132 0.2304 0.2373 0.2438 9.32% FabArray::setVal() 132 0.2309 0.2321 0.2331 8.91% ablastr::utils::communication::ParallelCopy 132 0.1135 0.149 0.1925 7.36% FabArray::ParallelCopy() 132 0.1131 0.1486 0.192 7.34% MultiFab::Copy() 66 0.1172 0.1212 0.1265 4.84% Diagnostics::FilterComputePackFlush() 4 0.124 0.1243 0.1248 4.77% FillBoundary_finish() 132 0.01238 0.05911 0.1094 4.18% FabArray::LinComb() 66 0.07039 0.09004 0.1085 4.15% FabArray::ParallelCopy_finish() 132 0.02386 0.06026 0.1041 3.98% ablastr::utils::communication::OverrideSync 18 0.0007926 0.05102 0.09805 3.75% FAbArray::OverrideSync() 18 0.0007784 0.051 0.09802 3.75% OverrideSync_finish() 18 0.0003115 0.05035 0.09743 3.73% FabArray::ParallelCopy_nowait() 132 0.08745 0.08795 0.0889 3.40% WarpX::EvolveB() 6 0.07421 0.08021 0.08546 3.27% sample::Coarsen() 6 0.03908 0.03926 0.03969 1.52% ablastr::utils::communication::FillBoundary 132 0.02649 0.02721 0.02775 1.06% FabArray::FillBoundary() 114 0.02333 0.02442 0.02545 0.97% FillBoundary_nowait() 132 0.01444 0.01865 0.02271 0.87% FlushFormatPlotfile::WriteToFile() 1 0.01787 0.01809 0.01829 0.70% WriteMultiLevelPlotfile() 1 0.01786 0.01802 0.01828 0.70% VisMF::Write(FabArray) 1 0.01724 0.01741 0.0178 0.68% Other 371 0.01205 0.01702 0.02203 0.84% -------------------------------------------------------------------------------------------- END REGION WarpX::Evolve() Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [roger_pec_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.TP(nvals = 1) :: [5.4545e-10] [TOP]::my_constants.dx(nvals = 3) :: [Lx, /, nx] [TOP]::my_constants.dy(nvals = 3) :: [Ly, /, ny] [TOP]::my_constants.dz(nvals = 3) :: [Lz, /, nz] [TOP]::my_constants.eps_r_nb(nvals = 1) :: [13.] [TOP]::my_constants.flag_none(nvals = 1) :: [0] [TOP]::my_constants.flag_ss(nvals = 1) :: [2] [TOP]::my_constants.mu_r_nb(nvals = 1) :: [1.0] [TOP]::my_constants.sigma_nb(nvals = 1) :: [1.e7] [TOP]::plt(nvals = 1) :: [roger_pec_plt] Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 4 4 B 6 B 9 B 8192 KiB 8192 KiB 8192 KiB main() 280 3297 B 3304 B 3311 B 3584 B 3584 B 3584 B WarpX::OneStep_nosub() 24 2208 B 2209 B 2211 B 2560 B 2560 B 2560 B WarpX::InitData() 12 731 B 734 B 737 B 768 B 768 B 768 B Unprofiled 88 0 B 0 B 0 B 256 B 256 B 256 B -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------- WarpX::InitData() 286 151 MiB 166 MiB 181 MiB 155 MiB 171 MiB 187 MiB PML::Exchange 1296 3188 KiB 3230 KiB 3296 KiB 10 MiB 10 MiB 11 MiB FillBoundary_nowait() 1074 3032 B 5138 B 6469 B 391 KiB 394 KiB 395 KiB FabArray::ParallelCopy_nowait() 1152 2973 B 3245 B 3524 B 86 KiB 104 KiB 122 KiB --------------------------------------------------------------------------------------------------------------- AMReX (26.04-105-g0b56ec9a168c) finalized