Initializing AMReX (26.04-109-g60df5ae33414)... MPI initialized with 4 MPI processes MPI initialized with thread support level 3 AMReX (26.04-109-g60df5ae33414) initialized WarpX (8eb71b6317a0) _____ __ .__ / _ \________/ |_ ____ _____ |__| ______ / /_\ \_ __ \ __\/ __ \ / \| |/ ___/ / | \ | \/| | \ ___/| Y Y \ |\___ \ \____|__ /__| |__| \___ >__|_| /__/____ > \/ \/ \/ \/ Level 0: dt = 7.703332806e-16 ; dx = 5e-07 ; dy = 5e-07 ; dz = 5e-07 --- INFO : we are in init data of macro Grids Summary: Level 0 4 grids 2097152 cells 100 % of domain smallest grid: 128 x 64 x 64 biggest grid: 128 x 64 x 64 ------------------------------------------------------------------------------- --------------------------- MAIN EM PIC PARAMETERS ---------------------------- ------------------------------------------------------------------------------- Precision: | DOUBLE Particle precision: | DOUBLE Geometry: | 3D (XYZ) Operation mode: | Electromagnetic | - macroscopic | - Lax-Wendroff algorithm ------------------------------------------------------------------------------- Current Deposition: | Esirkepov Particle Pusher: | Boris Charge Deposition: | standard Field Gathering: | energy-conserving Particle Shape Factor:| 0 ------------------------------------------------------------------------------- Maxwell Solver: | Yee ------------------------------------------------------------------------------- For full input parameters, see the file: warpx_used_inputs --- INFO : Writing plotfile diags/plt000000 STEP 1 starts ... Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [roger_pec_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.TP(nvals = 1) :: [5.4545e-10] [TOP]::my_constants.dx(nvals = 3) :: [Lx, /, nx] [TOP]::my_constants.dy(nvals = 3) :: [Ly, /, ny] [TOP]::my_constants.dz(nvals = 3) :: [Lz, /, nz] [TOP]::my_constants.eps_r_nb(nvals = 1) :: [13.] [TOP]::my_constants.flag_none(nvals = 1) :: [0] [TOP]::my_constants.flag_ss(nvals = 1) :: [2] [TOP]::my_constants.mu_r_nb(nvals = 1) :: [1.0] [TOP]::my_constants.sigma_nb(nvals = 1) :: [1.e7] [TOP]::plt(nvals = 1) :: [roger_pec_plt] **** WARNINGS ****************************************************************** * GLOBAL warning list after [ FIRST STEP ] * * --> [! ] [Species] [raised 4 times] * particles.nspecies is ignored. Just use particles.species_names please. * @ Raised by: ALL * ******************************************************************************** STEP 1 ends. TIME = 7.703332806e-16 DT = 7.703332806e-16 Evolve time = 0.868976035 s; This step = 0.868976035 s; Avg. per step = 0.868976035 s STEP 2 starts ... STEP 2 ends. TIME = 1.540666561e-15 DT = 7.703332806e-16 Evolve time = 1.477920015 s; This step = 0.60894398 s; Avg. per step = 0.7389600075 s STEP 3 starts ... STEP 3 ends. TIME = 2.310999842e-15 DT = 7.703332806e-16 Evolve time = 2.159645534 s; This step = 0.681725519 s; Avg. per step = 0.7198818447 s --- INFO : Writing plotfile diags/plt000003 Total Time : 2.549260852 TinyProfiler total time across processes [min...avg...max]: 2.558 ... 2.558 ... 2.56 -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- WarpX::OneStep_nosub() 3 0.998 1.035 1.074 41.98% FabArray::setVal() 177 0.3224 0.3302 0.3379 13.20% WarpX::MacroscopicEvolveE() 3 0.2871 0.3124 0.336 13.13% amrex::Copy() 144 0.2472 0.2543 0.2623 10.25% FabArray::ParallelCopy_finish() 144 0.02112 0.08219 0.1323 5.17% FabArray::LinComb() 72 0.07919 0.0989 0.1187 4.64% FabArray::ParallelCopy_nowait() 144 0.09018 0.09379 0.09545 3.73% sample::Coarsen() 12 0.08749 0.08795 0.08926 3.49% WarpX::EvolveB() 6 0.07683 0.08134 0.08473 3.31% FillBoundary_finish() 144 0.005918 0.03755 0.05837 2.28% WarpX::InitData() 1 0.03279 0.03626 0.03919 1.53% VisMF::Write(FabArray) 2 0.03433 0.03483 0.03553 1.39% PML::Exchange 72 0.02257 0.02397 0.02587 1.01% FillBoundary_nowait() 144 0.01541 0.02021 0.02477 0.97% WarpX::DampPML() 3 0.007014 0.01056 0.01324 0.52% WriteMultiLevelPlotfile() 2 3.711e-05 0.001386 0.002256 0.09% main() 1 0.001203 0.001557 0.001807 0.07% FlushFormatPlotfile::WriteToFile() 2 3.184e-05 0.0002236 0.0007861 0.03% FabArray::ParallelCopy() 144 0.0003712 0.0004396 0.0005067 0.02% ablastr::utils::communication::ParallelCopy 144 0.0003868 0.0004316 0.0004975 0.02% WarpX::Evolve::step 3 0.0001779 0.0003135 0.0004748 0.02% ablastr::utils::communication::FillBoundary 144 0.0002214 0.0002519 0.0002855 0.01% MultiFab::Copy() 72 0.0002218 0.0002406 0.000269 0.01% FabArray::FillBoundary() 126 0.0001415 0.0001496 0.0001585 0.01% Diagnostics::FilterComputePackFlush() 5 9.514e-05 0.0001063 0.0001196 0.00% ablastr::utils::communication::OverrideSync 18 1.421e-05 2.289e-05 3.028e-05 0.00% FAbArray::OverrideSync() 18 1.412e-05 1.924e-05 2.259e-05 0.00% OverrideSync_finish() 18 1.099e-05 1.248e-05 1.433e-05 0.00% WarpX::Evolve() 1 2.289e-06 2.916e-06 4.064e-06 0.00% REG::WarpX::Evolve() 1 2.153e-06 2.634e-06 3.083e-06 0.00% Other 440 0.001342 0.003158 0.00546 0.21% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- main() 1 2.547 2.548 2.549 99.59% REG::WarpX::Evolve() 1 2.284 2.284 2.285 89.25% WarpX::Evolve() 1 2.284 2.284 2.285 89.25% WarpX::Evolve::step 3 2.16 2.16 2.161 84.41% WarpX::OneStep_nosub() 3 1.892 1.892 1.892 73.93% PML::Exchange 72 0.7651 0.8133 0.8507 33.23% FabArray::setVal() 177 0.3224 0.3302 0.3379 13.20% WarpX::MacroscopicEvolveE() 3 0.2871 0.3124 0.336 13.13% Diagnostics::FilterComputePackFlush() 5 0.2652 0.2762 0.2882 11.26% WarpX::InitData() 1 0.261 0.2623 0.2638 10.30% amrex::Copy() 144 0.2472 0.2543 0.2623 10.25% ablastr::utils::communication::ParallelCopy 144 0.1172 0.1777 0.2259 8.82% FabArray::ParallelCopy() 144 0.1168 0.1773 0.2254 8.81% FabArray::ParallelCopy_finish() 144 0.02112 0.08219 0.1323 5.17% MultiFab::Copy() 72 0.1223 0.1266 0.132 5.16% FabArray::LinComb() 72 0.07919 0.0989 0.1187 4.64% FabArray::ParallelCopy_nowait() 144 0.09104 0.09463 0.09642 3.77% sample::Coarsen() 12 0.08749 0.08795 0.08926 3.49% WarpX::EvolveB() 6 0.07683 0.08134 0.08473 3.31% FillBoundary_finish() 144 0.005918 0.03755 0.05837 2.28% ablastr::utils::communication::OverrideSync 18 0.0008798 0.0287 0.05346 2.09% FAbArray::OverrideSync() 18 0.0008656 0.02868 0.05343 2.09% OverrideSync_finish() 18 0.0001735 0.02804 0.05268 2.06% FlushFormatPlotfile::WriteToFile() 2 0.03513 0.0365 0.03807 1.49% WriteMultiLevelPlotfile() 2 0.03509 0.03628 0.03728 1.46% VisMF::Write(FabArray) 2 0.03433 0.03483 0.03553 1.39% ablastr::utils::communication::FillBoundary 144 0.02944 0.03003 0.03066 1.20% FabArray::FillBoundary() 126 0.02607 0.02718 0.02835 1.11% FillBoundary_nowait() 144 0.01585 0.02067 0.02525 0.99% WarpX::DampPML() 3 0.007014 0.01056 0.01324 0.52% Other 440 0.006615 0.0133 0.02144 0.84% -------------------------------------------------------------------------------------------- BEGIN REGION WarpX::Evolve() -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- WarpX::OneStep_nosub() 3 0.998 1.035 1.074 41.98% WarpX::MacroscopicEvolveE() 3 0.2871 0.3124 0.336 13.13% amrex::Copy() 132 0.228 0.2346 0.243 9.49% FabArray::setVal() 132 0.2286 0.2307 0.2329 9.10% FabArray::LinComb() 66 0.07294 0.09117 0.1098 4.29% FabArray::ParallelCopy_finish() 132 0.01511 0.06582 0.1066 4.17% FabArray::ParallelCopy_nowait() 132 0.08302 0.08615 0.08762 3.42% WarpX::EvolveB() 6 0.07683 0.08134 0.08473 3.31% FillBoundary_finish() 132 0.00539 0.0367 0.05789 2.26% sample::Coarsen() 6 0.03827 0.03851 0.03917 1.53% PML::Exchange 66 0.01988 0.02112 0.02278 0.89% FillBoundary_nowait() 132 0.01417 0.01854 0.02276 0.89% VisMF::Write(FabArray) 1 0.0174 0.0177 0.01798 0.70% WriteMultiLevelPlotfile() 1 1.49e-05 0.0006943 0.001103 0.04% WarpX::Evolve::step 3 0.0001779 0.0003135 0.0004748 0.02% FabArray::ParallelCopy() 132 0.0003385 0.0004059 0.0004699 0.02% ablastr::utils::communication::ParallelCopy 132 0.0003608 0.0004051 0.0004688 0.02% ablastr::utils::communication::FillBoundary 132 0.0002029 0.0002325 0.0002653 0.01% FlushFormatPlotfile::WriteToFile() 1 1.243e-05 7.345e-05 0.0002539 0.01% MultiFab::Copy() 66 0.0002088 0.0002275 0.0002537 0.01% FabArray::FillBoundary() 114 0.000131 0.0001388 0.0001488 0.01% Diagnostics::FilterComputePackFlush() 4 5.242e-05 5.489e-05 5.783e-05 0.00% ablastr::utils::communication::OverrideSync 18 1.421e-05 2.289e-05 3.028e-05 0.00% FAbArray::OverrideSync() 18 1.412e-05 1.924e-05 2.259e-05 0.00% OverrideSync_finish() 18 1.099e-05 1.248e-05 1.433e-05 0.00% WarpX::Evolve() 1 2.289e-06 2.916e-06 4.064e-06 0.00% REG::WarpX::Evolve() 1 2.153e-06 2.634e-06 3.083e-06 0.00% Other 371 0.007888 0.01159 0.01452 0.57% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- REG::WarpX::Evolve() 1 2.284 2.284 2.285 89.25% WarpX::Evolve() 1 2.284 2.284 2.285 89.25% WarpX::Evolve::step 3 2.16 2.16 2.161 84.41% WarpX::OneStep_nosub() 3 1.892 1.892 1.892 73.93% PML::Exchange 66 0.6932 0.7312 0.7591 29.66% WarpX::MacroscopicEvolveE() 3 0.2871 0.3124 0.336 13.13% amrex::Copy() 132 0.228 0.2346 0.243 9.49% FabArray::setVal() 132 0.2286 0.2307 0.2329 9.10% ablastr::utils::communication::ParallelCopy 132 0.1031 0.1534 0.1912 7.47% FabArray::ParallelCopy() 132 0.1027 0.153 0.1908 7.45% Diagnostics::FilterComputePackFlush() 4 0.1235 0.1239 0.1243 4.85% MultiFab::Copy() 66 0.1137 0.1177 0.1237 4.83% FabArray::LinComb() 66 0.07294 0.09117 0.1098 4.29% FabArray::ParallelCopy_finish() 132 0.01511 0.06582 0.1066 4.17% FabArray::ParallelCopy_nowait() 132 0.08368 0.08677 0.08834 3.45% WarpX::EvolveB() 6 0.07683 0.08134 0.08473 3.31% FillBoundary_finish() 132 0.00539 0.0367 0.05789 2.26% ablastr::utils::communication::OverrideSync 18 0.0008798 0.0287 0.05346 2.09% FAbArray::OverrideSync() 18 0.0008656 0.02868 0.05343 2.09% OverrideSync_finish() 18 0.0001735 0.02804 0.05268 2.06% sample::Coarsen() 6 0.03827 0.03851 0.03917 1.53% ablastr::utils::communication::FillBoundary 132 0.02672 0.02732 0.02796 1.09% FabArray::FillBoundary() 114 0.02338 0.02448 0.02567 1.00% FillBoundary_nowait() 132 0.01449 0.01885 0.02307 0.90% FlushFormatPlotfile::WriteToFile() 1 0.01784 0.0185 0.01914 0.75% WriteMultiLevelPlotfile() 1 0.01783 0.01843 0.01889 0.74% VisMF::Write(FabArray) 1 0.0174 0.0177 0.01798 0.70% Other 371 0.01264 0.01749 0.02166 0.85% -------------------------------------------------------------------------------------------- END REGION WarpX::Evolve() Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [roger_pec_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.TP(nvals = 1) :: [5.4545e-10] [TOP]::my_constants.dx(nvals = 3) :: [Lx, /, nx] [TOP]::my_constants.dy(nvals = 3) :: [Ly, /, ny] [TOP]::my_constants.dz(nvals = 3) :: [Lz, /, nz] [TOP]::my_constants.eps_r_nb(nvals = 1) :: [13.] [TOP]::my_constants.flag_none(nvals = 1) :: [0] [TOP]::my_constants.flag_ss(nvals = 1) :: [2] [TOP]::my_constants.mu_r_nb(nvals = 1) :: [1.0] [TOP]::my_constants.sigma_nb(nvals = 1) :: [1.e7] [TOP]::plt(nvals = 1) :: [roger_pec_plt] Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 4 5 B 6 B 8 B 8192 KiB 8192 KiB 8192 KiB main() 280 3306 B 3308 B 3311 B 3584 B 3584 B 3584 B WarpX::OneStep_nosub() 24 2214 B 2216 B 2219 B 2560 B 2560 B 2560 B WarpX::InitData() 12 736 B 738 B 740 B 768 B 768 B 768 B Unprofiled 88 0 B 0 B 0 B 256 B 256 B 256 B -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------- WarpX::InitData() 286 151 MiB 167 MiB 182 MiB 155 MiB 171 MiB 187 MiB PML::Exchange 1296 3222 KiB 3316 KiB 3361 KiB 10 MiB 10 MiB 11 MiB FillBoundary_nowait() 1074 3601 B 4485 B 6146 B 391 KiB 394 KiB 395 KiB FabArray::ParallelCopy_nowait() 1152 3084 B 3394 B 3810 B 86 KiB 104 KiB 122 KiB --------------------------------------------------------------------------------------------------------------- AMReX (26.04-109-g60df5ae33414) finalized