Initializing AMReX (26.04-113-g05a28aa730e4)... MPI initialized with 4 MPI processes MPI initialized with thread support level 3 AMReX (26.04-113-g05a28aa730e4) initialized WarpX (8eb71b6317a0) _____ __ .__ / _ \________/ |_ ____ _____ |__| ______ / /_\ \_ __ \ __\/ __ \ / \| |/ ___/ / | \ | \/| | \ ___/| Y Y \ |\___ \ \____|__ /__| |__| \___ >__|_| /__/____ > \/ \/ \/ \/ Level 0: dt = 7.703332806e-16 ; dx = 5e-07 ; dy = 5e-07 ; dz = 5e-07 --- INFO : we are in init data of macro Grids Summary: Level 0 4 grids 2097152 cells 100 % of domain smallest grid: 128 x 64 x 64 biggest grid: 128 x 64 x 64 ------------------------------------------------------------------------------- --------------------------- MAIN EM PIC PARAMETERS ---------------------------- ------------------------------------------------------------------------------- Precision: | DOUBLE Particle precision: | DOUBLE Geometry: | 3D (XYZ) Operation mode: | Electromagnetic | - macroscopic | - Lax-Wendroff algorithm ------------------------------------------------------------------------------- Current Deposition: | Esirkepov Particle Pusher: | Boris Charge Deposition: | standard Field Gathering: | energy-conserving Particle Shape Factor:| 0 ------------------------------------------------------------------------------- Maxwell Solver: | Yee ------------------------------------------------------------------------------- For full input parameters, see the file: warpx_used_inputs --- INFO : Writing plotfile diags/plt000000 STEP 1 starts ... Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [roger_pec_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.TP(nvals = 1) :: [5.4545e-10] [TOP]::my_constants.dx(nvals = 3) :: [Lx, /, nx] [TOP]::my_constants.dy(nvals = 3) :: [Ly, /, ny] [TOP]::my_constants.dz(nvals = 3) :: [Lz, /, nz] [TOP]::my_constants.eps_r_nb(nvals = 1) :: [13.] [TOP]::my_constants.flag_none(nvals = 1) :: [0] [TOP]::my_constants.flag_ss(nvals = 1) :: [2] [TOP]::my_constants.mu_r_nb(nvals = 1) :: [1.0] [TOP]::my_constants.sigma_nb(nvals = 1) :: [1.e7] [TOP]::plt(nvals = 1) :: [roger_pec_plt] **** WARNINGS ****************************************************************** * GLOBAL warning list after [ FIRST STEP ] * * --> [! ] [Species] [raised 4 times] * particles.nspecies is ignored. Just use particles.species_names please. * @ Raised by: ALL * ******************************************************************************** STEP 1 ends. TIME = 7.703332806e-16 DT = 7.703332806e-16 Evolve time = 0.865753556 s; This step = 0.865753556 s; Avg. per step = 0.865753556 s STEP 2 starts ... STEP 2 ends. TIME = 1.540666561e-15 DT = 7.703332806e-16 Evolve time = 1.475628357 s; This step = 0.609874801 s; Avg. per step = 0.7378141785 s STEP 3 starts ... STEP 3 ends. TIME = 2.310999842e-15 DT = 7.703332806e-16 Evolve time = 2.151648108 s; This step = 0.676019751 s; Avg. per step = 0.717216036 s --- INFO : Writing plotfile diags/plt000003 Total Time : 2.534481962 TinyProfiler total time across processes [min...avg...max]: 2.544 ... 2.545 ... 2.547 -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- WarpX::OneStep_nosub() 3 1.01 1.036 1.053 41.36% FabArray::setVal() 177 0.3209 0.3315 0.3432 13.48% WarpX::MacroscopicEvolveE() 3 0.2871 0.313 0.3417 13.42% amrex::Copy() 144 0.2478 0.2549 0.2637 10.35% FabArray::ParallelCopy_finish() 144 0.01807 0.07621 0.1377 5.41% FabArray::LinComb() 72 0.07746 0.09805 0.1209 4.75% FabArray::ParallelCopy_nowait() 144 0.09131 0.09406 0.09772 3.84% WarpX::EvolveB() 6 0.07409 0.08694 0.09643 3.79% sample::Coarsen() 12 0.08381 0.0842 0.0851 3.34% FillBoundary_finish() 144 0.007396 0.02777 0.05728 2.25% WarpX::InitData() 1 0.03033 0.03341 0.03676 1.44% VisMF::Write(FabArray) 2 0.03498 0.03536 0.03624 1.42% PML::Exchange 72 0.02124 0.02335 0.02628 1.03% FillBoundary_nowait() 144 0.01483 0.01942 0.0246 0.97% WarpX::DampPML() 3 0.008491 0.01185 0.01454 0.57% main() 1 0.00124 0.001665 0.001939 0.08% WriteMultiLevelPlotfile() 2 0.0006364 0.001024 0.001311 0.05% FlushFormatPlotfile::WriteToFile() 2 3.483e-05 0.0002149 0.0007281 0.03% WarpX::Evolve::step 3 0.0001624 0.000359 0.000544 0.02% FabArray::ParallelCopy() 144 0.0003543 0.0004353 0.0005265 0.02% ablastr::utils::communication::ParallelCopy 144 0.0003651 0.0003975 0.0004399 0.02% MultiFab::Copy() 72 0.000197 0.0002725 0.0003946 0.02% ablastr::utils::communication::FillBoundary 144 0.0002339 0.0002536 0.0002772 0.01% FabArray::FillBoundary() 126 0.0001331 0.000144 0.0001542 0.01% Diagnostics::FilterComputePackFlush() 5 9.576e-05 0.0001039 0.0001241 0.00% ablastr::utils::communication::OverrideSync 18 1.605e-05 2.28e-05 2.93e-05 0.00% FAbArray::OverrideSync() 18 1.521e-05 1.928e-05 2.313e-05 0.00% OverrideSync_finish() 18 9.805e-06 1.174e-05 1.455e-05 0.00% WarpX::Evolve() 1 2.195e-06 2.901e-06 4.021e-06 0.00% REG::WarpX::Evolve() 1 1.996e-06 2.277e-06 2.667e-06 0.00% Other 440 0.001385 0.003004 0.005105 0.20% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- main() 1 2.534 2.534 2.534 99.51% REG::WarpX::Evolve() 1 2.274 2.274 2.274 89.29% WarpX::Evolve() 1 2.274 2.274 2.274 89.29% WarpX::Evolve::step 3 2.152 2.153 2.153 84.53% WarpX::OneStep_nosub() 3 1.883 1.883 1.884 73.96% PML::Exchange 72 0.7661 0.8078 0.8561 33.61% FabArray::setVal() 177 0.3209 0.3315 0.3432 13.48% WarpX::MacroscopicEvolveE() 3 0.2871 0.313 0.3417 13.42% Diagnostics::FilterComputePackFlush() 5 0.2613 0.2729 0.2849 11.19% amrex::Copy() 144 0.2478 0.2549 0.2637 10.35% WarpX::InitData() 1 0.2584 0.2587 0.2596 10.19% ablastr::utils::communication::ParallelCopy 144 0.1129 0.1719 0.2308 9.06% FabArray::ParallelCopy() 144 0.1125 0.1715 0.2304 9.05% FabArray::ParallelCopy_finish() 144 0.01807 0.07621 0.1377 5.41% MultiFab::Copy() 72 0.1203 0.1272 0.1343 5.27% FabArray::LinComb() 72 0.07746 0.09805 0.1209 4.75% FabArray::ParallelCopy_nowait() 144 0.09216 0.0949 0.09873 3.88% WarpX::EvolveB() 6 0.07409 0.08694 0.09643 3.79% sample::Coarsen() 12 0.08381 0.0842 0.0851 3.34% FillBoundary_finish() 144 0.007396 0.02777 0.05728 2.25% ablastr::utils::communication::OverrideSync 18 0.001024 0.01801 0.04347 1.71% FAbArray::OverrideSync() 18 0.001008 0.01799 0.04344 1.71% OverrideSync_finish() 18 0.0003575 0.01733 0.04285 1.68% FlushFormatPlotfile::WriteToFile() 2 0.03583 0.03665 0.03817 1.50% WriteMultiLevelPlotfile() 2 0.03578 0.03644 0.03744 1.47% VisMF::Write(FabArray) 2 0.03498 0.03536 0.03624 1.42% ablastr::utils::communication::FillBoundary 144 0.02964 0.03016 0.03068 1.20% FabArray::FillBoundary() 126 0.02658 0.02747 0.02842 1.12% FillBoundary_nowait() 144 0.01527 0.0199 0.02516 0.99% WarpX::DampPML() 3 0.008491 0.01185 0.01454 0.57% Other 440 0.006616 0.01293 0.02074 0.81% -------------------------------------------------------------------------------------------- BEGIN REGION WarpX::Evolve() -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- WarpX::OneStep_nosub() 3 1.01 1.036 1.053 41.36% WarpX::MacroscopicEvolveE() 3 0.2871 0.313 0.3417 13.42% amrex::Copy() 132 0.2282 0.2349 0.243 9.54% FabArray::setVal() 132 0.2298 0.2316 0.2328 9.14% FabArray::LinComb() 66 0.07104 0.09018 0.1113 4.37% FabArray::ParallelCopy_finish() 132 0.01739 0.06013 0.108 4.24% WarpX::EvolveB() 6 0.07409 0.08694 0.09643 3.79% FabArray::ParallelCopy_nowait() 132 0.08397 0.08641 0.08988 3.53% FillBoundary_finish() 132 0.006582 0.02666 0.05574 2.19% sample::Coarsen() 6 0.03568 0.03587 0.0363 1.43% PML::Exchange 66 0.01864 0.02067 0.02329 0.91% FillBoundary_nowait() 132 0.01363 0.01783 0.02252 0.88% VisMF::Write(FabArray) 1 0.01798 0.01813 0.01843 0.72% WriteMultiLevelPlotfile() 1 0.0002019 0.0004592 0.000619 0.02% WarpX::Evolve::step 3 0.0001624 0.000359 0.000544 0.02% FabArray::ParallelCopy() 132 0.0003253 0.0004029 0.0004929 0.02% ablastr::utils::communication::ParallelCopy 132 0.0003435 0.0003728 0.0004098 0.02% MultiFab::Copy() 66 0.0001844 0.00026 0.0003822 0.02% ablastr::utils::communication::FillBoundary 132 0.0002153 0.0002341 0.0002532 0.01% FlushFormatPlotfile::WriteToFile() 1 1.285e-05 7.358e-05 0.0002476 0.01% FabArray::FillBoundary() 114 0.0001234 0.0001332 0.0001429 0.01% Diagnostics::FilterComputePackFlush() 4 4.953e-05 5.204e-05 5.743e-05 0.00% ablastr::utils::communication::OverrideSync 18 1.605e-05 2.28e-05 2.93e-05 0.00% FAbArray::OverrideSync() 18 1.521e-05 1.928e-05 2.313e-05 0.00% OverrideSync_finish() 18 9.805e-06 1.174e-05 1.455e-05 0.00% WarpX::Evolve() 1 2.195e-06 2.901e-06 4.021e-06 0.00% REG::WarpX::Evolve() 1 1.996e-06 2.277e-06 2.667e-06 0.00% Other 371 0.009392 0.01291 0.01586 0.62% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- REG::WarpX::Evolve() 1 2.274 2.274 2.274 89.29% WarpX::Evolve() 1 2.274 2.274 2.274 89.29% WarpX::Evolve::step 3 2.152 2.153 2.153 84.53% WarpX::OneStep_nosub() 3 1.883 1.883 1.884 73.96% PML::Exchange 66 0.6933 0.7255 0.7634 29.97% WarpX::MacroscopicEvolveE() 3 0.2871 0.313 0.3417 13.42% amrex::Copy() 132 0.2282 0.2349 0.243 9.54% FabArray::setVal() 132 0.2298 0.2316 0.2328 9.14% ablastr::utils::communication::ParallelCopy 132 0.1043 0.1479 0.1934 7.59% FabArray::ParallelCopy() 132 0.104 0.1476 0.193 7.58% MultiFab::Copy() 66 0.1113 0.1178 0.1245 4.89% Diagnostics::FilterComputePackFlush() 4 0.1212 0.1215 0.1219 4.79% FabArray::LinComb() 66 0.07104 0.09018 0.1113 4.37% FabArray::ParallelCopy_finish() 132 0.01739 0.06013 0.108 4.24% WarpX::EvolveB() 6 0.07409 0.08694 0.09643 3.79% FabArray::ParallelCopy_nowait() 132 0.08462 0.08704 0.09063 3.56% FillBoundary_finish() 132 0.006582 0.02666 0.05574 2.19% ablastr::utils::communication::OverrideSync 18 0.001024 0.01801 0.04347 1.71% FAbArray::OverrideSync() 18 0.001008 0.01799 0.04344 1.71% OverrideSync_finish() 18 0.0003575 0.01733 0.04285 1.68% sample::Coarsen() 6 0.03568 0.03587 0.0363 1.43% ablastr::utils::communication::FillBoundary 132 0.02672 0.02727 0.0278 1.09% FabArray::FillBoundary() 114 0.02369 0.0246 0.02556 1.00% FillBoundary_nowait() 132 0.01394 0.01816 0.02287 0.90% FlushFormatPlotfile::WriteToFile() 1 0.0183 0.01869 0.01919 0.75% WriteMultiLevelPlotfile() 1 0.01828 0.01861 0.01895 0.74% VisMF::Write(FabArray) 1 0.01798 0.01813 0.01843 0.72% Other 371 0.01403 0.01849 0.02249 0.88% -------------------------------------------------------------------------------------------- END REGION WarpX::Evolve() Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [roger_pec_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.TP(nvals = 1) :: [5.4545e-10] [TOP]::my_constants.dx(nvals = 3) :: [Lx, /, nx] [TOP]::my_constants.dy(nvals = 3) :: [Ly, /, ny] [TOP]::my_constants.dz(nvals = 3) :: [Lz, /, nz] [TOP]::my_constants.eps_r_nb(nvals = 1) :: [13.] [TOP]::my_constants.flag_none(nvals = 1) :: [0] [TOP]::my_constants.flag_ss(nvals = 1) :: [2] [TOP]::my_constants.mu_r_nb(nvals = 1) :: [1.0] [TOP]::my_constants.sigma_nb(nvals = 1) :: [1.e7] [TOP]::plt(nvals = 1) :: [roger_pec_plt] Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 4 4 B 6 B 10 B 8192 KiB 8192 KiB 8192 KiB main() 280 3305 B 3306 B 3309 B 3584 B 3584 B 3584 B WarpX::OneStep_nosub() 24 2215 B 2216 B 2218 B 2560 B 2560 B 2560 B WarpX::InitData() 12 734 B 737 B 740 B 768 B 768 B 768 B Unprofiled 88 0 B 0 B 0 B 256 B 256 B 256 B -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------- WarpX::InitData() 286 151 MiB 167 MiB 182 MiB 155 MiB 171 MiB 187 MiB PML::Exchange 1296 3239 KiB 3308 KiB 3403 KiB 10 MiB 10 MiB 11 MiB FillBoundary_nowait() 1074 3331 B 4194 B 4970 B 391 KiB 394 KiB 395 KiB FabArray::ParallelCopy_nowait() 1152 3080 B 3335 B 3529 B 86 KiB 104 KiB 122 KiB --------------------------------------------------------------------------------------------------------------- AMReX (26.04-113-g05a28aa730e4) finalized