Initializing AMReX (26.04-115-gb5e000952a01)... MPI initialized with 4 MPI processes MPI initialized with thread support level 3 AMReX (26.04-115-gb5e000952a01) initialized WarpX (8eb71b6317a0) _____ __ .__ / _ \________/ |_ ____ _____ |__| ______ / /_\ \_ __ \ __\/ __ \ / \| |/ ___/ / | \ | \/| | \ ___/| Y Y \ |\___ \ \____|__ /__| |__| \___ >__|_| /__/____ > \/ \/ \/ \/ Level 0: dt = 7.703332806e-16 ; dx = 5e-07 ; dy = 5e-07 ; dz = 5e-07 --- INFO : we are in init data of macro Grids Summary: Level 0 4 grids 2097152 cells 100 % of domain smallest grid: 128 x 64 x 64 biggest grid: 128 x 64 x 64 ------------------------------------------------------------------------------- --------------------------- MAIN EM PIC PARAMETERS ---------------------------- ------------------------------------------------------------------------------- Precision: | DOUBLE Particle precision: | DOUBLE Geometry: | 3D (XYZ) Operation mode: | Electromagnetic | - macroscopic | - Lax-Wendroff algorithm ------------------------------------------------------------------------------- Current Deposition: | Esirkepov Particle Pusher: | Boris Charge Deposition: | standard Field Gathering: | energy-conserving Particle Shape Factor:| 0 ------------------------------------------------------------------------------- Maxwell Solver: | Yee ------------------------------------------------------------------------------- For full input parameters, see the file: warpx_used_inputs --- INFO : Writing plotfile diags/plt000000 STEP 1 starts ... Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [roger_pec_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.TP(nvals = 1) :: [5.4545e-10] [TOP]::my_constants.dx(nvals = 3) :: [Lx, /, nx] [TOP]::my_constants.dy(nvals = 3) :: [Ly, /, ny] [TOP]::my_constants.dz(nvals = 3) :: [Lz, /, nz] [TOP]::my_constants.eps_r_nb(nvals = 1) :: [13.] [TOP]::my_constants.flag_none(nvals = 1) :: [0] [TOP]::my_constants.flag_ss(nvals = 1) :: [2] [TOP]::my_constants.mu_r_nb(nvals = 1) :: [1.0] [TOP]::my_constants.sigma_nb(nvals = 1) :: [1.e7] [TOP]::plt(nvals = 1) :: [roger_pec_plt] **** WARNINGS ****************************************************************** * GLOBAL warning list after [ FIRST STEP ] * * --> [! ] [Species] [raised 4 times] * particles.nspecies is ignored. Just use particles.species_names please. * @ Raised by: ALL * ******************************************************************************** STEP 1 ends. TIME = 7.703332806e-16 DT = 7.703332806e-16 Evolve time = 0.891551698 s; This step = 0.891551698 s; Avg. per step = 0.891551698 s STEP 2 starts ... STEP 2 ends. TIME = 1.540666561e-15 DT = 7.703332806e-16 Evolve time = 1.50493966 s; This step = 0.613387962 s; Avg. per step = 0.75246983 s STEP 3 starts ... STEP 3 ends. TIME = 2.310999842e-15 DT = 7.703332806e-16 Evolve time = 2.185572251 s; This step = 0.680632591 s; Avg. per step = 0.7285240837 s --- INFO : Writing plotfile diags/plt000003 Total Time : 2.567952547 TinyProfiler total time across processes [min...avg...max]: 2.576 ... 2.579 ... 2.58 -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- WarpX::OneStep_nosub() 3 1.027 1.059 1.081 41.90% FabArray::setVal() 177 0.3216 0.3314 0.341 13.22% WarpX::MacroscopicEvolveE() 3 0.2875 0.3139 0.3394 13.15% amrex::Copy() 144 0.2472 0.2555 0.263 10.19% FabArray::ParallelCopy_finish() 144 0.02391 0.0829 0.1504 5.83% FabArray::LinComb() 72 0.07815 0.09776 0.1175 4.55% FabArray::ParallelCopy_nowait() 144 0.09234 0.09438 0.09612 3.73% WarpX::EvolveB() 6 0.07659 0.08434 0.09004 3.49% sample::Coarsen() 12 0.08309 0.08377 0.08495 3.29% FillBoundary_finish() 144 0.005971 0.03475 0.06049 2.34% WarpX::InitData() 1 0.03037 0.03337 0.03579 1.39% VisMF::Write(FabArray) 2 0.03472 0.03509 0.03569 1.38% PML::Exchange 72 0.02244 0.02355 0.02583 1.00% FillBoundary_nowait() 144 0.01532 0.01975 0.02428 0.94% WarpX::DampPML() 3 0.006256 0.01006 0.01187 0.46% WriteMultiLevelPlotfile() 2 0.0004977 0.001982 0.003091 0.12% main() 1 0.001036 0.001343 0.001508 0.06% FlushFormatPlotfile::WriteToFile() 2 3.758e-05 0.0002169 0.0007493 0.03% FabArray::ParallelCopy() 144 0.0003416 0.0004385 0.0005271 0.02% WarpX::Evolve::step 3 0.0001742 0.0002951 0.0004553 0.02% ablastr::utils::communication::ParallelCopy 144 0.0003805 0.0004152 0.0004325 0.02% ablastr::utils::communication::FillBoundary 144 0.0002286 0.000253 0.0002831 0.01% MultiFab::Copy() 72 0.0002159 0.000231 0.0002479 0.01% FabArray::FillBoundary() 126 0.0001305 0.0001405 0.0001455 0.01% Diagnostics::FilterComputePackFlush() 5 0.0001051 0.0001065 0.0001088 0.00% ablastr::utils::communication::OverrideSync 18 1.677e-05 2.256e-05 2.953e-05 0.00% FAbArray::OverrideSync() 18 1.528e-05 1.924e-05 2.144e-05 0.00% OverrideSync_finish() 18 1.048e-05 1.195e-05 1.261e-05 0.00% WarpX::Evolve() 1 2.302e-06 3.278e-06 4.834e-06 0.00% REG::WarpX::Evolve() 1 1.787e-06 2.911e-06 4.415e-06 0.00% Other 440 0.001309 0.002339 0.003891 0.15% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- main() 1 2.567 2.568 2.568 99.53% REG::WarpX::Evolve() 1 2.308 2.308 2.308 89.46% WarpX::Evolve() 1 2.308 2.308 2.308 89.46% WarpX::Evolve::step 3 2.186 2.186 2.187 84.75% WarpX::OneStep_nosub() 3 1.917 1.917 1.918 74.33% PML::Exchange 72 0.7667 0.8146 0.8688 33.67% FabArray::setVal() 177 0.3216 0.3314 0.341 13.22% WarpX::MacroscopicEvolveE() 3 0.2875 0.3139 0.3394 13.15% Diagnostics::FilterComputePackFlush() 5 0.2624 0.2729 0.2831 10.97% amrex::Copy() 144 0.2472 0.2555 0.263 10.19% WarpX::InitData() 1 0.2577 0.2582 0.2588 10.03% ablastr::utils::communication::ParallelCopy 144 0.1217 0.179 0.2483 9.62% FabArray::ParallelCopy() 144 0.1212 0.1785 0.2478 9.61% FabArray::ParallelCopy_finish() 144 0.02391 0.0829 0.1504 5.83% MultiFab::Copy() 72 0.121 0.1268 0.1329 5.15% FabArray::LinComb() 72 0.07815 0.09776 0.1175 4.55% FabArray::ParallelCopy_nowait() 144 0.09305 0.0952 0.09692 3.76% WarpX::EvolveB() 6 0.07659 0.08434 0.09004 3.49% sample::Coarsen() 12 0.08309 0.08377 0.08495 3.29% FillBoundary_finish() 144 0.005971 0.03475 0.06049 2.34% ablastr::utils::communication::OverrideSync 18 0.0009177 0.02577 0.04782 1.85% FAbArray::OverrideSync() 18 0.000901 0.02574 0.04779 1.85% OverrideSync_finish() 18 0.0002001 0.02509 0.04718 1.83% FlushFormatPlotfile::WriteToFile() 2 0.03689 0.03735 0.03785 1.47% WriteMultiLevelPlotfile() 2 0.03641 0.03713 0.03782 1.47% VisMF::Write(FabArray) 2 0.03472 0.03509 0.03569 1.38% ablastr::utils::communication::FillBoundary 144 0.02922 0.02969 0.03023 1.17% FabArray::FillBoundary() 126 0.02602 0.02693 0.02785 1.08% FillBoundary_nowait() 144 0.01577 0.02021 0.02473 0.96% WarpX::DampPML() 3 0.006256 0.01006 0.01187 0.46% Other 440 0.006494 0.01068 0.01625 0.63% -------------------------------------------------------------------------------------------- BEGIN REGION WarpX::Evolve() -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- WarpX::OneStep_nosub() 3 1.027 1.059 1.081 41.90% WarpX::MacroscopicEvolveE() 3 0.2875 0.3139 0.3394 13.15% amrex::Copy() 132 0.2283 0.236 0.2427 9.40% FabArray::setVal() 132 0.2292 0.2312 0.2353 9.12% FabArray::ParallelCopy_finish() 132 0.01958 0.06634 0.1238 4.80% FabArray::LinComb() 66 0.07234 0.09003 0.1077 4.18% WarpX::EvolveB() 6 0.07659 0.08434 0.09004 3.49% FabArray::ParallelCopy_nowait() 132 0.0843 0.0867 0.0885 3.43% FillBoundary_finish() 132 0.005349 0.03382 0.05922 2.30% sample::Coarsen() 6 0.03592 0.03614 0.03663 1.42% PML::Exchange 66 0.01971 0.02077 0.02291 0.89% FillBoundary_nowait() 132 0.01412 0.01815 0.02237 0.87% VisMF::Write(FabArray) 1 0.01784 0.01802 0.0182 0.71% WriteMultiLevelPlotfile() 1 1.035e-05 0.0005219 0.0009163 0.04% FabArray::ParallelCopy() 132 0.0003167 0.0004065 0.0004871 0.02% WarpX::Evolve::step 3 0.0001742 0.0002951 0.0004553 0.02% ablastr::utils::communication::ParallelCopy 132 0.0003538 0.000388 0.0004054 0.02% ablastr::utils::communication::FillBoundary 132 0.0002071 0.0002334 0.0002628 0.01% FlushFormatPlotfile::WriteToFile() 1 1.279e-05 7.309e-05 0.0002491 0.01% MultiFab::Copy() 66 0.0002007 0.0002177 0.0002357 0.01% FabArray::FillBoundary() 114 0.0001201 0.0001301 0.000135 0.01% Diagnostics::FilterComputePackFlush() 4 5.307e-05 6.001e-05 6.44e-05 0.00% ablastr::utils::communication::OverrideSync 18 1.677e-05 2.256e-05 2.953e-05 0.00% FAbArray::OverrideSync() 18 1.528e-05 1.924e-05 2.144e-05 0.00% OverrideSync_finish() 18 1.048e-05 1.195e-05 1.261e-05 0.00% WarpX::Evolve() 1 2.302e-06 3.278e-06 4.834e-06 0.00% REG::WarpX::Evolve() 1 1.787e-06 2.911e-06 4.415e-06 0.00% Other 371 0.007089 0.01108 0.01312 0.51% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- REG::WarpX::Evolve() 1 2.308 2.308 2.308 89.46% WarpX::Evolve() 1 2.308 2.308 2.308 89.46% WarpX::Evolve::step 3 2.186 2.186 2.187 84.75% WarpX::OneStep_nosub() 3 1.917 1.917 1.918 74.33% PML::Exchange 66 0.6942 0.7326 0.7765 30.10% WarpX::MacroscopicEvolveE() 3 0.2875 0.3139 0.3394 13.15% amrex::Copy() 132 0.2283 0.236 0.2427 9.40% FabArray::setVal() 132 0.2292 0.2312 0.2353 9.12% ablastr::utils::communication::ParallelCopy 132 0.1092 0.1544 0.2139 8.29% FabArray::ParallelCopy() 132 0.1088 0.1541 0.2135 8.27% MultiFab::Copy() 66 0.1121 0.1181 0.1239 4.80% FabArray::ParallelCopy_finish() 132 0.01958 0.06634 0.1238 4.80% Diagnostics::FilterComputePackFlush() 4 0.1216 0.1217 0.122 4.73% FabArray::LinComb() 66 0.07234 0.09003 0.1077 4.18% WarpX::EvolveB() 6 0.07659 0.08434 0.09004 3.49% FabArray::ParallelCopy_nowait() 132 0.08479 0.0873 0.08919 3.46% FillBoundary_finish() 132 0.005349 0.03382 0.05922 2.30% ablastr::utils::communication::OverrideSync 18 0.0009177 0.02577 0.04782 1.85% FAbArray::OverrideSync() 18 0.000901 0.02574 0.04779 1.85% OverrideSync_finish() 18 0.0002001 0.02509 0.04718 1.83% sample::Coarsen() 6 0.03592 0.03614 0.03663 1.42% ablastr::utils::communication::FillBoundary 132 0.0265 0.02698 0.02749 1.07% FabArray::FillBoundary() 114 0.02331 0.02424 0.02513 0.97% FillBoundary_nowait() 132 0.01444 0.01846 0.02264 0.88% FlushFormatPlotfile::WriteToFile() 1 0.01806 0.01865 0.01905 0.74% WriteMultiLevelPlotfile() 1 0.01805 0.01857 0.0188 0.73% VisMF::Write(FabArray) 1 0.01784 0.01802 0.0182 0.71% Other 371 0.01174 0.0168 0.01978 0.77% -------------------------------------------------------------------------------------------- END REGION WarpX::Evolve() Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [roger_pec_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.TP(nvals = 1) :: [5.4545e-10] [TOP]::my_constants.dx(nvals = 3) :: [Lx, /, nx] [TOP]::my_constants.dy(nvals = 3) :: [Ly, /, ny] [TOP]::my_constants.dz(nvals = 3) :: [Lz, /, nz] [TOP]::my_constants.eps_r_nb(nvals = 1) :: [13.] [TOP]::my_constants.flag_none(nvals = 1) :: [0] [TOP]::my_constants.flag_ss(nvals = 1) :: [2] [TOP]::my_constants.mu_r_nb(nvals = 1) :: [1.0] [TOP]::my_constants.sigma_nb(nvals = 1) :: [1.e7] [TOP]::plt(nvals = 1) :: [roger_pec_plt] Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 4 3 B 4 B 8 B 8192 KiB 8192 KiB 8192 KiB main() 280 3310 B 3312 B 3315 B 3584 B 3584 B 3584 B WarpX::OneStep_nosub() 24 2224 B 2225 B 2227 B 2560 B 2560 B 2560 B WarpX::InitData() 12 736 B 738 B 741 B 768 B 768 B 768 B Unprofiled 88 0 B 0 B 0 B 256 B 256 B 256 B -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------- WarpX::InitData() 286 152 MiB 167 MiB 182 MiB 155 MiB 171 MiB 187 MiB PML::Exchange 1296 3205 KiB 3298 KiB 3414 KiB 10 MiB 10 MiB 11 MiB FillBoundary_nowait() 1074 3517 B 4311 B 5457 B 391 KiB 394 KiB 395 KiB FabArray::ParallelCopy_nowait() 1152 3017 B 3343 B 3574 B 86 KiB 104 KiB 122 KiB --------------------------------------------------------------------------------------------------------------- AMReX (26.04-115-gb5e000952a01) finalized