Initializing AMReX (26.04-116-g6f2c4aff90ae)... MPI initialized with 4 MPI processes MPI initialized with thread support level 3 AMReX (26.04-116-g6f2c4aff90ae) initialized WarpX (8eb71b6317a0) _____ __ .__ / _ \________/ |_ ____ _____ |__| ______ / /_\ \_ __ \ __\/ __ \ / \| |/ ___/ / | \ | \/| | \ ___/| Y Y \ |\___ \ \____|__ /__| |__| \___ >__|_| /__/____ > \/ \/ \/ \/ Level 0: dt = 7.703332806e-16 ; dx = 5e-07 ; dy = 5e-07 ; dz = 5e-07 --- INFO : we are in init data of macro Grids Summary: Level 0 4 grids 2097152 cells 100 % of domain smallest grid: 128 x 64 x 64 biggest grid: 128 x 64 x 64 ------------------------------------------------------------------------------- --------------------------- MAIN EM PIC PARAMETERS ---------------------------- ------------------------------------------------------------------------------- Precision: | DOUBLE Particle precision: | DOUBLE Geometry: | 3D (XYZ) Operation mode: | Electromagnetic | - macroscopic | - Lax-Wendroff algorithm ------------------------------------------------------------------------------- Current Deposition: | Esirkepov Particle Pusher: | Boris Charge Deposition: | standard Field Gathering: | energy-conserving Particle Shape Factor:| 0 ------------------------------------------------------------------------------- Maxwell Solver: | Yee ------------------------------------------------------------------------------- For full input parameters, see the file: warpx_used_inputs --- INFO : Writing plotfile diags/plt000000 STEP 1 starts ... Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [roger_pec_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.TP(nvals = 1) :: [5.4545e-10] [TOP]::my_constants.dx(nvals = 3) :: [Lx, /, nx] [TOP]::my_constants.dy(nvals = 3) :: [Ly, /, ny] [TOP]::my_constants.dz(nvals = 3) :: [Lz, /, nz] [TOP]::my_constants.eps_r_nb(nvals = 1) :: [13.] [TOP]::my_constants.flag_none(nvals = 1) :: [0] [TOP]::my_constants.flag_ss(nvals = 1) :: [2] [TOP]::my_constants.mu_r_nb(nvals = 1) :: [1.0] [TOP]::my_constants.sigma_nb(nvals = 1) :: [1.e7] [TOP]::plt(nvals = 1) :: [roger_pec_plt] **** WARNINGS ****************************************************************** * GLOBAL warning list after [ FIRST STEP ] * * --> [! ] [Species] [raised 4 times] * particles.nspecies is ignored. Just use particles.species_names please. * @ Raised by: ALL * ******************************************************************************** STEP 1 ends. TIME = 7.703332806e-16 DT = 7.703332806e-16 Evolve time = 0.864054047 s; This step = 0.864054047 s; Avg. per step = 0.864054047 s STEP 2 starts ... STEP 2 ends. TIME = 1.540666561e-15 DT = 7.703332806e-16 Evolve time = 1.472074049 s; This step = 0.608020002 s; Avg. per step = 0.7360370245 s STEP 3 starts ... STEP 3 ends. TIME = 2.310999842e-15 DT = 7.703332806e-16 Evolve time = 2.147464395 s; This step = 0.675390346 s; Avg. per step = 0.715821465 s --- INFO : Writing plotfile diags/plt000003 Total Time : 2.54117051 TinyProfiler total time across processes [min...avg...max]: 2.545 ... 2.548 ... 2.553 -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- WarpX::OneStep_nosub() 3 1.014 1.038 1.052 41.19% WarpX::MacroscopicEvolveE() 3 0.2855 0.3119 0.3418 13.39% FabArray::setVal() 177 0.3216 0.3307 0.3408 13.35% amrex::Copy() 144 0.246 0.2549 0.2647 10.37% FabArray::ParallelCopy_finish() 144 0.01789 0.07507 0.1343 5.26% FabArray::LinComb() 72 0.0777 0.09782 0.1181 4.62% FabArray::ParallelCopy_nowait() 144 0.09267 0.09458 0.09682 3.79% WarpX::EvolveB() 6 0.0752 0.08796 0.09576 3.75% sample::Coarsen() 12 0.08801 0.08843 0.08936 3.50% FillBoundary_finish() 144 0.005827 0.02475 0.05055 1.98% WarpX::InitData() 1 0.03024 0.03373 0.037 1.45% VisMF::Write(FabArray) 2 0.03406 0.03432 0.03495 1.37% PML::Exchange 72 0.02162 0.0233 0.0262 1.03% FillBoundary_nowait() 144 0.01505 0.01978 0.02433 0.95% WarpX::DampPML() 3 0.008251 0.01102 0.01353 0.53% ParticleCopyPlan::doHandShake 1 1.97e-05 0.002778 0.007027 0.28% main() 1 0.001584 0.001719 0.00204 0.08% WriteMultiLevelPlotfile() 2 0.0005033 0.001011 0.001248 0.05% FlushFormatPlotfile::WriteToFile() 2 3.469e-05 0.0001948 0.0006708 0.03% FabArray::ParallelCopy() 144 0.0003488 0.0004231 0.0005053 0.02% ablastr::utils::communication::ParallelCopy 144 0.0003922 0.0004287 0.0004845 0.02% WarpX::Evolve::step 3 0.0001493 0.0002862 0.0004709 0.02% ablastr::utils::communication::FillBoundary 144 0.0002201 0.0002569 0.0002879 0.01% MultiFab::Copy() 72 0.0001947 0.0002158 0.0002255 0.01% FabArray::FillBoundary() 126 0.0001352 0.0001408 0.0001444 0.01% Diagnostics::FilterComputePackFlush() 5 8.826e-05 9.795e-05 0.0001235 0.00% ablastr::utils::communication::OverrideSync 18 1.36e-05 2.286e-05 3.309e-05 0.00% FAbArray::OverrideSync() 18 1.357e-05 1.81e-05 2.141e-05 0.00% ParticleCopyPlan::buildMPIStart 1 6.504e-06 1.106e-05 1.86e-05 0.00% ParticleContainer::Redistribute_impl() 1 8.762e-06 1.315e-05 1.639e-05 0.00% OverrideSync_finish() 18 9.969e-06 1.198e-05 1.428e-05 0.00% ParticleCopyPlan::build 1 3.031e-06 7.928e-06 1.051e-05 0.00% AmrMesh::MakeDistributionMap() 1 1.783e-06 4.209e-06 6.641e-06 0.00% REG::WarpX::Evolve() 1 2.085e-06 2.604e-06 3.053e-06 0.00% WarpX::Evolve() 1 2.205e-06 2.446e-06 2.606e-06 0.00% Other 435 0.001284 0.004644 0.00819 0.32% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- main() 1 2.535 2.538 2.541 99.52% REG::WarpX::Evolve() 1 2.271 2.272 2.272 88.98% WarpX::Evolve() 1 2.271 2.272 2.272 88.98% WarpX::Evolve::step 3 2.148 2.148 2.148 84.14% WarpX::OneStep_nosub() 3 1.88 1.88 1.88 73.63% PML::Exchange 72 0.764 0.8064 0.8559 33.52% WarpX::MacroscopicEvolveE() 3 0.2855 0.3119 0.3418 13.39% FabArray::setVal() 177 0.3216 0.3307 0.3408 13.35% Diagnostics::FilterComputePackFlush() 5 0.2656 0.2768 0.2879 11.28% WarpX::InitData() 1 0.2613 0.2647 0.2678 10.49% amrex::Copy() 144 0.246 0.2549 0.2647 10.37% ablastr::utils::communication::ParallelCopy 144 0.1126 0.1713 0.2287 8.96% FabArray::ParallelCopy() 144 0.1122 0.1709 0.2282 8.94% MultiFab::Copy() 72 0.1196 0.1268 0.1349 5.28% FabArray::ParallelCopy_finish() 144 0.01789 0.07507 0.1343 5.26% FabArray::LinComb() 72 0.0777 0.09782 0.1181 4.62% FabArray::ParallelCopy_nowait() 144 0.09351 0.09541 0.0978 3.83% WarpX::EvolveB() 6 0.0752 0.08796 0.09576 3.75% sample::Coarsen() 12 0.08801 0.08843 0.08936 3.50% FillBoundary_finish() 144 0.005827 0.02475 0.05055 1.98% ablastr::utils::communication::OverrideSync 18 0.0009071 0.01596 0.03804 1.49% FAbArray::OverrideSync() 18 0.0008935 0.01594 0.03801 1.49% OverrideSync_finish() 18 0.0001779 0.01526 0.03737 1.46% FlushFormatPlotfile::WriteToFile() 2 0.03463 0.03558 0.03694 1.45% WriteMultiLevelPlotfile() 2 0.0346 0.03539 0.03627 1.42% VisMF::Write(FabArray) 2 0.03406 0.03432 0.03495 1.37% ablastr::utils::communication::FillBoundary 144 0.02899 0.02953 0.03004 1.18% FabArray::FillBoundary() 126 0.02579 0.02675 0.02768 1.08% FillBoundary_nowait() 144 0.01549 0.02024 0.0248 0.97% WarpX::DampPML() 3 0.008251 0.01102 0.01353 0.53% ParticleContainer::Redistribute_impl() 1 0.0001223 0.002903 0.007157 0.28% ParticleCopyPlan::build 1 2.977e-05 0.002798 0.007057 0.28% ParticleCopyPlan::buildMPIStart 1 2.621e-05 0.00279 0.007046 0.28% ParticleCopyPlan::doHandShake 1 1.97e-05 0.002778 0.007027 0.28% AmrMesh::MakeDistributionMap() 1 2.017e-05 0.003132 0.006252 0.24% Other 435 0.006364 0.01386 0.02161 0.85% -------------------------------------------------------------------------------------------- BEGIN REGION WarpX::Evolve() -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- WarpX::OneStep_nosub() 3 1.014 1.038 1.052 41.19% WarpX::MacroscopicEvolveE() 3 0.2855 0.3119 0.3418 13.39% amrex::Copy() 132 0.2262 0.2354 0.2446 9.58% FabArray::setVal() 132 0.2285 0.2314 0.2333 9.14% FabArray::LinComb() 66 0.07162 0.09033 0.1095 4.29% FabArray::ParallelCopy_finish() 132 0.0141 0.05783 0.1032 4.04% WarpX::EvolveB() 6 0.0752 0.08796 0.09576 3.75% FabArray::ParallelCopy_nowait() 132 0.08464 0.08649 0.08895 3.48% FillBoundary_finish() 132 0.005309 0.02385 0.04929 1.93% sample::Coarsen() 6 0.03847 0.03864 0.03912 1.53% PML::Exchange 66 0.01888 0.02055 0.02329 0.91% FillBoundary_nowait() 132 0.01377 0.01814 0.02236 0.88% VisMF::Write(FabArray) 1 0.01712 0.01726 0.01747 0.68% WriteMultiLevelPlotfile() 1 0.0002054 0.0005142 0.0006545 0.03% FabArray::ParallelCopy() 132 0.0003241 0.0003921 0.0004776 0.02% WarpX::Evolve::step 3 0.0001493 0.0002862 0.0004709 0.02% ablastr::utils::communication::ParallelCopy 132 0.0003658 0.0004046 0.0004573 0.02% ablastr::utils::communication::FillBoundary 132 0.0002034 0.000238 0.000266 0.01% FlushFormatPlotfile::WriteToFile() 1 1.249e-05 7.322e-05 0.0002492 0.01% MultiFab::Copy() 66 0.0001836 0.0002043 0.0002138 0.01% FabArray::FillBoundary() 114 0.0001247 0.0001305 0.0001349 0.01% Diagnostics::FilterComputePackFlush() 4 4.751e-05 5.165e-05 5.706e-05 0.00% ablastr::utils::communication::OverrideSync 18 1.36e-05 2.286e-05 3.309e-05 0.00% FAbArray::OverrideSync() 18 1.357e-05 1.81e-05 2.141e-05 0.00% OverrideSync_finish() 18 9.969e-06 1.198e-05 1.428e-05 0.00% REG::WarpX::Evolve() 1 2.085e-06 2.604e-06 3.053e-06 0.00% WarpX::Evolve() 1 2.205e-06 2.446e-06 2.606e-06 0.00% Other 371 0.009111 0.01204 0.01482 0.58% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- REG::WarpX::Evolve() 1 2.271 2.272 2.272 88.98% WarpX::Evolve() 1 2.271 2.272 2.272 88.98% WarpX::Evolve::step 3 2.148 2.148 2.148 84.14% WarpX::OneStep_nosub() 3 1.88 1.88 1.88 73.63% PML::Exchange 66 0.6914 0.7236 0.7623 29.86% WarpX::MacroscopicEvolveE() 3 0.2855 0.3119 0.3418 13.39% amrex::Copy() 132 0.2262 0.2354 0.2446 9.58% FabArray::setVal() 132 0.2285 0.2314 0.2333 9.14% ablastr::utils::communication::ParallelCopy 132 0.1003 0.1457 0.1893 7.42% FabArray::ParallelCopy() 132 0.0999 0.1453 0.1889 7.40% MultiFab::Copy() 66 0.1112 0.118 0.1255 4.92% Diagnostics::FilterComputePackFlush() 4 0.1235 0.1236 0.124 4.85% FabArray::LinComb() 66 0.07162 0.09033 0.1095 4.29% FabArray::ParallelCopy_finish() 132 0.0141 0.05783 0.1032 4.04% WarpX::EvolveB() 6 0.0752 0.08796 0.09576 3.75% FabArray::ParallelCopy_nowait() 132 0.08523 0.0871 0.0897 3.51% FillBoundary_finish() 132 0.005309 0.02385 0.04929 1.93% sample::Coarsen() 6 0.03847 0.03864 0.03912 1.53% ablastr::utils::communication::OverrideSync 18 0.0009071 0.01596 0.03804 1.49% FAbArray::OverrideSync() 18 0.0008935 0.01594 0.03801 1.49% OverrideSync_finish() 18 0.0001779 0.01526 0.03737 1.46% ablastr::utils::communication::FillBoundary 132 0.02626 0.0268 0.02733 1.07% FabArray::FillBoundary() 114 0.02308 0.02404 0.02497 0.98% FillBoundary_nowait() 132 0.01408 0.01844 0.02266 0.89% FlushFormatPlotfile::WriteToFile() 1 0.01734 0.01787 0.01836 0.72% WriteMultiLevelPlotfile() 1 0.01733 0.0178 0.01811 0.71% VisMF::Write(FabArray) 1 0.01712 0.01726 0.01747 0.68% Other 371 0.01385 0.0178 0.02166 0.85% -------------------------------------------------------------------------------------------- END REGION WarpX::Evolve() Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [roger_pec_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.TP(nvals = 1) :: [5.4545e-10] [TOP]::my_constants.dx(nvals = 3) :: [Lx, /, nx] [TOP]::my_constants.dy(nvals = 3) :: [Ly, /, ny] [TOP]::my_constants.dz(nvals = 3) :: [Lz, /, nz] [TOP]::my_constants.eps_r_nb(nvals = 1) :: [13.] [TOP]::my_constants.flag_none(nvals = 1) :: [0] [TOP]::my_constants.flag_ss(nvals = 1) :: [2] [TOP]::my_constants.mu_r_nb(nvals = 1) :: [1.0] [TOP]::my_constants.sigma_nb(nvals = 1) :: [1.e7] [TOP]::plt(nvals = 1) :: [roger_pec_plt] Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 4 5 B 7 B 9 B 8192 KiB 8192 KiB 8192 KiB main() 280 3298 B 3303 B 3310 B 3584 B 3584 B 3584 B WarpX::OneStep_nosub() 24 2208 B 2209 B 2211 B 2560 B 2560 B 2560 B WarpX::InitData() 12 733 B 735 B 738 B 768 B 768 B 768 B Unprofiled 88 0 B 0 B 0 B 256 B 256 B 256 B -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------- WarpX::InitData() 286 151 MiB 166 MiB 181 MiB 155 MiB 171 MiB 187 MiB PML::Exchange 1296 3220 KiB 3294 KiB 3394 KiB 10 MiB 10 MiB 11 MiB FillBoundary_nowait() 1074 3317 B 4040 B 4718 B 391 KiB 394 KiB 395 KiB FabArray::ParallelCopy_nowait() 1152 3072 B 3340 B 3597 B 86 KiB 104 KiB 122 KiB --------------------------------------------------------------------------------------------------------------- AMReX (26.04-116-g6f2c4aff90ae) finalized