Initializing AMReX (26.05-3-g4ceb814db7d7)... MPI initialized with 4 MPI processes MPI initialized with thread support level 3 AMReX (26.05-3-g4ceb814db7d7) initialized WarpX (8eb71b6317a0) _____ __ .__ / _ \________/ |_ ____ _____ |__| ______ / /_\ \_ __ \ __\/ __ \ / \| |/ ___/ / | \ | \/| | \ ___/| Y Y \ |\___ \ \____|__ /__| |__| \___ >__|_| /__/____ > \/ \/ \/ \/ Level 0: dt = 7.703332806e-16 ; dx = 5e-07 ; dy = 5e-07 ; dz = 5e-07 --- INFO : we are in init data of macro Grids Summary: Level 0 4 grids 2097152 cells 100 % of domain smallest grid: 128 x 64 x 64 biggest grid: 128 x 64 x 64 ------------------------------------------------------------------------------- --------------------------- MAIN EM PIC PARAMETERS ---------------------------- ------------------------------------------------------------------------------- Precision: | DOUBLE Particle precision: | DOUBLE Geometry: | 3D (XYZ) Operation mode: | Electromagnetic | - macroscopic | - Lax-Wendroff algorithm ------------------------------------------------------------------------------- Current Deposition: | Esirkepov Particle Pusher: | Boris Charge Deposition: | standard Field Gathering: | energy-conserving Particle Shape Factor:| 0 ------------------------------------------------------------------------------- Maxwell Solver: | Yee ------------------------------------------------------------------------------- For full input parameters, see the file: warpx_used_inputs --- INFO : Writing plotfile diags/plt000000 STEP 1 starts ... Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [roger_pec_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.TP(nvals = 1) :: [5.4545e-10] [TOP]::my_constants.dx(nvals = 3) :: [Lx, /, nx] [TOP]::my_constants.dy(nvals = 3) :: [Ly, /, ny] [TOP]::my_constants.dz(nvals = 3) :: [Lz, /, nz] [TOP]::my_constants.eps_r_nb(nvals = 1) :: [13.] [TOP]::my_constants.flag_none(nvals = 1) :: [0] [TOP]::my_constants.flag_ss(nvals = 1) :: [2] [TOP]::my_constants.mu_r_nb(nvals = 1) :: [1.0] [TOP]::my_constants.sigma_nb(nvals = 1) :: [1.e7] [TOP]::plt(nvals = 1) :: [roger_pec_plt] **** WARNINGS ****************************************************************** * GLOBAL warning list after [ FIRST STEP ] * * --> [! ] [Species] [raised 4 times] * particles.nspecies is ignored. Just use particles.species_names please. * @ Raised by: ALL * ******************************************************************************** STEP 1 ends. TIME = 7.703332806e-16 DT = 7.703332806e-16 Evolve time = 0.895382779 s; This step = 0.895382779 s; Avg. per step = 0.895382779 s STEP 2 starts ... STEP 2 ends. TIME = 1.540666561e-15 DT = 7.703332806e-16 Evolve time = 1.509886766 s; This step = 0.614503987 s; Avg. per step = 0.754943383 s STEP 3 starts ... STEP 3 ends. TIME = 2.310999842e-15 DT = 7.703332806e-16 Evolve time = 2.192807014 s; This step = 0.682920248 s; Avg. per step = 0.7309356713 s --- INFO : Writing plotfile diags/plt000003 Total Time : 2.604827443 TinyProfiler total time across processes [min...avg...max]: 2.607 ... 2.61 ... 2.613 -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- WarpX::OneStep_nosub() 3 1.045 1.078 1.102 42.15% FabArray::setVal() 177 0.3248 0.3357 0.3459 13.24% WarpX::MacroscopicEvolveE() 3 0.2856 0.3106 0.3334 12.76% amrex::Copy() 144 0.2496 0.2558 0.2645 10.12% FabArray::ParallelCopy_finish() 144 0.01807 0.07172 0.1311 5.02% FabArray::LinComb() 72 0.07706 0.09771 0.1183 4.53% FabArray::ParallelCopy_nowait() 144 0.09264 0.09395 0.09455 3.62% WarpX::EvolveB() 6 0.07706 0.08574 0.09055 3.46% sample::Coarsen() 12 0.08852 0.08896 0.09023 3.45% FillBoundary_finish() 144 0.02026 0.03681 0.0776 2.97% WarpX::InitData() 1 0.03244 0.03703 0.04399 1.68% VisMF::Write(FabArray) 2 0.03361 0.03425 0.03524 1.35% PML::Exchange 72 0.02231 0.02318 0.02544 0.97% FillBoundary_nowait() 144 0.01518 0.01987 0.02463 0.94% WarpX::DampPML() 3 0.009031 0.0118 0.01506 0.58% DistributionMapping::LeastUsedCPUs() 1 2.144e-05 0.005015 0.009579 0.37% WriteMultiLevelPlotfile() 2 5.622e-05 0.006476 0.00905 0.35% main() 1 0.00148 0.002203 0.002785 0.11% FlushFormatPlotfile::WriteToFile() 2 3.785e-05 0.0001864 0.0006209 0.02% FabArray::ParallelCopy() 144 0.0003568 0.000436 0.0005249 0.02% ablastr::utils::communication::ParallelCopy 144 0.0003703 0.0004083 0.0004648 0.02% WarpX::Evolve::step 3 0.0002161 0.0003218 0.0004551 0.02% ablastr::utils::communication::FillBoundary 144 0.0002279 0.0002453 0.0002632 0.01% MultiFab::Copy() 72 0.0002112 0.0002296 0.0002504 0.01% FabArray::FillBoundary() 126 0.0001328 0.0001431 0.0001604 0.01% Diagnostics::FilterComputePackFlush() 5 9.318e-05 0.0001009 0.0001161 0.00% ablastr::utils::communication::OverrideSync 18 2.006e-05 2.226e-05 2.554e-05 0.00% FAbArray::OverrideSync() 18 1.691e-05 1.894e-05 2.037e-05 0.00% OverrideSync_finish() 18 9.418e-06 1.063e-05 1.136e-05 0.00% AmrMesh::MakeDistributionMap() 1 2.161e-06 6.918e-06 9.544e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.927e-06 4.454e-06 5.561e-06 0.00% WarpX::Evolve() 1 2.272e-06 2.759e-06 3.787e-06 0.00% REG::WarpX::Evolve() 1 1.843e-06 2.566e-06 3.685e-06 0.00% Other 437 0.001352 0.003579 0.009223 0.35% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- main() 1 2.596 2.6 2.605 99.67% REG::WarpX::Evolve() 1 2.317 2.317 2.317 88.67% WarpX::Evolve() 1 2.317 2.317 2.317 88.67% WarpX::Evolve::step 3 2.193 2.194 2.194 83.94% WarpX::OneStep_nosub() 3 1.925 1.925 1.926 73.68% PML::Exchange 72 0.7635 0.8042 0.8493 32.50% FabArray::setVal() 177 0.3248 0.3357 0.3459 13.24% WarpX::MacroscopicEvolveE() 3 0.2856 0.3106 0.3334 12.76% Diagnostics::FilterComputePackFlush() 5 0.2717 0.2863 0.298 11.40% WarpX::InitData() 1 0.2758 0.2809 0.2852 10.91% amrex::Copy() 144 0.2496 0.2558 0.2645 10.12% ablastr::utils::communication::ParallelCopy 144 0.1139 0.1674 0.2255 8.63% FabArray::ParallelCopy() 144 0.1135 0.167 0.2251 8.61% MultiFab::Copy() 72 0.1239 0.129 0.1351 5.17% FabArray::ParallelCopy_finish() 144 0.01807 0.07172 0.1311 5.02% FabArray::LinComb() 72 0.07706 0.09771 0.1183 4.53% FabArray::ParallelCopy_nowait() 144 0.09353 0.09482 0.09557 3.66% WarpX::EvolveB() 6 0.07706 0.08574 0.09055 3.46% sample::Coarsen() 12 0.08852 0.08896 0.09023 3.45% FillBoundary_finish() 144 0.02026 0.03681 0.0776 2.97% ablastr::utils::communication::OverrideSync 18 0.01153 0.02775 0.06476 2.48% FAbArray::OverrideSync() 18 0.01151 0.02773 0.06473 2.48% OverrideSync_finish() 18 0.01096 0.02706 0.06411 2.45% FlushFormatPlotfile::WriteToFile() 2 0.04251 0.04258 0.0427 1.63% WriteMultiLevelPlotfile() 2 0.04197 0.0424 0.04266 1.63% VisMF::Write(FabArray) 2 0.03361 0.03425 0.03524 1.35% ablastr::utils::communication::FillBoundary 144 0.02915 0.02995 0.03051 1.17% FabArray::FillBoundary() 126 0.02581 0.027 0.02803 1.07% FillBoundary_nowait() 144 0.01584 0.02039 0.0251 0.96% WarpX::DampPML() 3 0.009031 0.0118 0.01506 0.58% AmrMesh::MakeDistributionMap() 1 3.407e-05 0.005028 0.009596 0.37% DistributionMapping::SFCProcessorMapDoIt() 1 2.698e-05 0.005021 0.009586 0.37% DistributionMapping::LeastUsedCPUs() 1 2.144e-05 0.005015 0.009579 0.37% Other 437 0.006873 0.01111 0.01881 0.72% -------------------------------------------------------------------------------------------- BEGIN REGION WarpX::Evolve() -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- WarpX::OneStep_nosub() 3 1.045 1.078 1.102 42.15% WarpX::MacroscopicEvolveE() 3 0.2856 0.3106 0.3334 12.76% amrex::Copy() 132 0.2306 0.2363 0.2442 9.34% FabArray::setVal() 132 0.2315 0.2324 0.2334 8.93% FabArray::LinComb() 66 0.07079 0.09011 0.1089 4.17% FabArray::ParallelCopy_finish() 132 0.01178 0.05174 0.09594 3.67% WarpX::EvolveB() 6 0.07706 0.08574 0.09055 3.46% FabArray::ParallelCopy_nowait() 132 0.08518 0.0863 0.08704 3.33% FillBoundary_finish() 132 0.01977 0.03593 0.07635 2.92% sample::Coarsen() 6 0.03858 0.0388 0.03935 1.51% FillBoundary_nowait() 132 0.01396 0.01824 0.02263 0.87% PML::Exchange 66 0.01954 0.02042 0.02248 0.86% VisMF::Write(FabArray) 1 0.01713 0.01739 0.01784 0.68% WriteMultiLevelPlotfile() 1 1.632e-05 0.000697 0.00106 0.04% FabArray::ParallelCopy() 132 0.0003294 0.0004072 0.0004938 0.02% WarpX::Evolve::step 3 0.0002161 0.0003218 0.0004551 0.02% ablastr::utils::communication::ParallelCopy 132 0.0003486 0.0003832 0.0004417 0.02% FlushFormatPlotfile::WriteToFile() 1 1.419e-05 7.3e-05 0.0002446 0.01% ablastr::utils::communication::FillBoundary 132 0.0002099 0.0002258 0.0002411 0.01% MultiFab::Copy() 66 0.0001983 0.0002164 0.0002363 0.01% FabArray::FillBoundary() 114 0.0001231 0.0001317 0.0001492 0.01% Diagnostics::FilterComputePackFlush() 4 4.819e-05 5.337e-05 5.802e-05 0.00% ablastr::utils::communication::OverrideSync 18 2.006e-05 2.226e-05 2.554e-05 0.00% FAbArray::OverrideSync() 18 1.691e-05 1.894e-05 2.037e-05 0.00% OverrideSync_finish() 18 9.418e-06 1.063e-05 1.136e-05 0.00% WarpX::Evolve() 1 2.272e-06 2.759e-06 3.787e-06 0.00% REG::WarpX::Evolve() 1 1.843e-06 2.566e-06 3.685e-06 0.00% Other 371 0.009919 0.01291 0.01657 0.63% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- REG::WarpX::Evolve() 1 2.317 2.317 2.317 88.67% WarpX::Evolve() 1 2.317 2.317 2.317 88.67% WarpX::Evolve::step 3 2.193 2.194 2.194 83.94% WarpX::OneStep_nosub() 3 1.925 1.925 1.926 73.68% PML::Exchange 66 0.6923 0.719 0.752 28.77% WarpX::MacroscopicEvolveE() 3 0.2856 0.3106 0.3334 12.76% amrex::Copy() 132 0.2306 0.2363 0.2442 9.34% FabArray::setVal() 132 0.2315 0.2324 0.2334 8.93% ablastr::utils::communication::ParallelCopy 132 0.09963 0.1395 0.1826 6.99% FabArray::ParallelCopy() 132 0.09927 0.1391 0.1822 6.97% MultiFab::Copy() 66 0.1157 0.1203 0.1258 4.81% Diagnostics::FilterComputePackFlush() 4 0.1235 0.1237 0.1243 4.75% FabArray::LinComb() 66 0.07079 0.09011 0.1089 4.17% FabArray::ParallelCopy_finish() 132 0.01178 0.05174 0.09594 3.67% WarpX::EvolveB() 6 0.07706 0.08574 0.09055 3.46% FabArray::ParallelCopy_nowait() 132 0.08581 0.08695 0.08782 3.36% FillBoundary_finish() 132 0.01977 0.03593 0.07635 2.92% ablastr::utils::communication::OverrideSync 18 0.01153 0.02775 0.06476 2.48% FAbArray::OverrideSync() 18 0.01151 0.02773 0.06473 2.48% OverrideSync_finish() 18 0.01096 0.02706 0.06411 2.45% sample::Coarsen() 6 0.03858 0.0388 0.03935 1.51% ablastr::utils::communication::FillBoundary 132 0.02644 0.02725 0.02784 1.07% FabArray::FillBoundary() 114 0.02312 0.02432 0.02535 0.97% FillBoundary_nowait() 132 0.01448 0.0186 0.02293 0.88% FlushFormatPlotfile::WriteToFile() 1 0.01817 0.01819 0.01821 0.70% WriteMultiLevelPlotfile() 1 0.01796 0.01812 0.0182 0.70% VisMF::Write(FabArray) 1 0.01713 0.01739 0.01784 0.68% Other 371 0.01495 0.01906 0.02399 0.92% -------------------------------------------------------------------------------------------- END REGION WarpX::Evolve() Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [roger_pec_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.TP(nvals = 1) :: [5.4545e-10] [TOP]::my_constants.dx(nvals = 3) :: [Lx, /, nx] [TOP]::my_constants.dy(nvals = 3) :: [Ly, /, ny] [TOP]::my_constants.dz(nvals = 3) :: [Lz, /, nz] [TOP]::my_constants.eps_r_nb(nvals = 1) :: [13.] [TOP]::my_constants.flag_none(nvals = 1) :: [0] [TOP]::my_constants.flag_ss(nvals = 1) :: [2] [TOP]::my_constants.mu_r_nb(nvals = 1) :: [1.0] [TOP]::my_constants.sigma_nb(nvals = 1) :: [1.e7] [TOP]::plt(nvals = 1) :: [roger_pec_plt] Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 4 4 B 5 B 10 B 8192 KiB 8192 KiB 8192 KiB main() 280 3301 B 3303 B 3306 B 3584 B 3584 B 3584 B WarpX::OneStep_nosub() 24 2198 B 2200 B 2204 B 2560 B 2560 B 2560 B WarpX::InitData() 12 733 B 735 B 737 B 768 B 768 B 768 B Unprofiled 88 0 B 0 B 0 B 256 B 256 B 256 B -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------- WarpX::InitData() 286 151 MiB 166 MiB 181 MiB 155 MiB 171 MiB 187 MiB PML::Exchange 1296 3147 KiB 3208 KiB 3287 KiB 10 MiB 10 MiB 11 MiB FillBoundary_nowait() 1074 3294 B 4306 B 4658 B 391 KiB 394 KiB 395 KiB FabArray::ParallelCopy_nowait() 1152 2995 B 3219 B 3478 B 86 KiB 104 KiB 122 KiB --------------------------------------------------------------------------------------------------------------- AMReX (26.05-3-g4ceb814db7d7) finalized