Initializing AMReX (26.05-3-g4ceb814db7d7)... MPI initialized with 4 MPI processes MPI initialized with thread support level 3 AMReX (26.05-3-g4ceb814db7d7) initialized WarpX (8eb71b6317a0) _____ __ .__ / _ \________/ |_ ____ _____ |__| ______ / /_\ \_ __ \ __\/ __ \ / \| |/ ___/ / | \ | \/| | \ ___/| Y Y \ |\___ \ \____|__ /__| |__| \___ >__|_| /__/____ > \/ \/ \/ \/ Level 0: dt = 7.703332806e-16 ; dx = 5e-07 ; dy = 5e-07 ; dz = 5e-07 --- INFO : we are in init data of macro Grids Summary: Level 0 4 grids 2097152 cells 100 % of domain smallest grid: 128 x 64 x 64 biggest grid: 128 x 64 x 64 ------------------------------------------------------------------------------- --------------------------- MAIN EM PIC PARAMETERS ---------------------------- ------------------------------------------------------------------------------- Precision: | DOUBLE Particle precision: | DOUBLE Geometry: | 3D (XYZ) Operation mode: | Electromagnetic | - macroscopic | - Lax-Wendroff algorithm ------------------------------------------------------------------------------- Current Deposition: | Esirkepov Particle Pusher: | Boris Charge Deposition: | standard Field Gathering: | energy-conserving Particle Shape Factor:| 0 ------------------------------------------------------------------------------- Maxwell Solver: | Yee ------------------------------------------------------------------------------- For full input parameters, see the file: warpx_used_inputs --- INFO : Writing plotfile diags/plt000000 STEP 1 starts ... Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [roger_pec_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.TP(nvals = 1) :: [5.4545e-10] [TOP]::my_constants.dx(nvals = 3) :: [Lx, /, nx] [TOP]::my_constants.dy(nvals = 3) :: [Ly, /, ny] [TOP]::my_constants.dz(nvals = 3) :: [Lz, /, nz] [TOP]::my_constants.eps_r_nb(nvals = 1) :: [13.] [TOP]::my_constants.flag_none(nvals = 1) :: [0] [TOP]::my_constants.flag_ss(nvals = 1) :: [2] [TOP]::my_constants.mu_r_nb(nvals = 1) :: [1.0] [TOP]::my_constants.sigma_nb(nvals = 1) :: [1.e7] [TOP]::plt(nvals = 1) :: [roger_pec_plt] **** WARNINGS ****************************************************************** * GLOBAL warning list after [ FIRST STEP ] * * --> [! ] [Species] [raised 4 times] * particles.nspecies is ignored. Just use particles.species_names please. * @ Raised by: ALL * ******************************************************************************** STEP 1 ends. TIME = 7.703332806e-16 DT = 7.703332806e-16 Evolve time = 0.886733822 s; This step = 0.886733822 s; Avg. per step = 0.886733822 s STEP 2 starts ... STEP 2 ends. TIME = 1.540666561e-15 DT = 7.703332806e-16 Evolve time = 1.502819416 s; This step = 0.616085594 s; Avg. per step = 0.751409708 s STEP 3 starts ... STEP 3 ends. TIME = 2.310999842e-15 DT = 7.703332806e-16 Evolve time = 2.186670089 s; This step = 0.683850673 s; Avg. per step = 0.7288900297 s --- INFO : Writing plotfile diags/plt000003 Total Time : 2.619776937 TinyProfiler total time across processes [min...avg...max]: 2.629 ... 2.63 ... 2.632 -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- WarpX::OneStep_nosub() 3 1.041 1.067 1.102 41.86% FabArray::setVal() 177 0.3233 0.3342 0.345 13.11% WarpX::MacroscopicEvolveE() 3 0.2849 0.3105 0.3355 12.75% amrex::Copy() 144 0.2456 0.253 0.2648 10.06% FabArray::ParallelCopy_finish() 144 0.01355 0.1124 0.1922 7.30% FabArray::LinComb() 72 0.07702 0.1001 0.1225 4.66% FabArray::ParallelCopy_nowait() 144 0.09012 0.09362 0.09513 3.61% WarpX::EvolveB() 6 0.08003 0.08366 0.08801 3.34% sample::Coarsen() 12 0.08697 0.0873 0.08776 3.33% WarpX::InitData() 1 0.03221 0.04597 0.07939 3.02% FillBoundary_finish() 144 0.01432 0.03375 0.05772 2.19% VisMF::Write(FabArray) 2 0.03493 0.03691 0.03912 1.49% FillBoundary_nowait() 144 0.01501 0.01984 0.02465 0.94% PML::Exchange 72 0.02243 0.02318 0.02427 0.92% WarpX::DampPML() 3 0.006265 0.01106 0.01577 0.60% WriteMultiLevelPlotfile() 2 0.0007039 0.001242 0.001893 0.07% main() 1 0.001261 0.001707 0.001885 0.07% FabArray::ParallelCopy() 144 0.0003516 0.0004527 0.0006037 0.02% FlushFormatPlotfile::WriteToFile() 2 3.457e-05 0.0001706 0.0005675 0.02% WarpX::Evolve::step 3 0.0002151 0.0003212 0.0004863 0.02% ablastr::utils::communication::ParallelCopy 144 0.0003735 0.0004042 0.0004434 0.02% ablastr::utils::communication::FillBoundary 144 0.0002116 0.0002479 0.0002788 0.01% MultiFab::Copy() 72 0.0002109 0.0002299 0.0002595 0.01% FabArray::FillBoundary() 126 0.0001367 0.0001403 0.0001444 0.01% Diagnostics::FilterComputePackFlush() 5 9.585e-05 9.914e-05 0.0001045 0.00% ablastr::utils::communication::OverrideSync 18 1.8e-05 2.316e-05 2.798e-05 0.00% FAbArray::OverrideSync() 18 1.289e-05 1.957e-05 2.556e-05 0.00% OverrideSync_finish() 18 7.723e-06 1.031e-05 1.171e-05 0.00% WarpX::Evolve() 1 2.548e-06 2.915e-06 3.188e-06 0.00% REG::WarpX::Evolve() 1 1.615e-06 2.329e-06 2.758e-06 0.00% Other 440 0.001358 0.001928 0.002481 0.09% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- main() 1 2.619 2.62 2.62 99.55% REG::WarpX::Evolve() 1 2.31 2.312 2.314 87.92% WarpX::Evolve() 1 2.31 2.312 2.314 87.92% WarpX::Evolve::step 3 2.187 2.189 2.191 83.24% WarpX::OneStep_nosub() 3 1.915 1.915 1.915 72.78% PML::Exchange 72 0.7636 0.8439 0.9029 34.31% FabArray::setVal() 177 0.3233 0.3342 0.345 13.11% WarpX::MacroscopicEvolveE() 3 0.2849 0.3105 0.3355 12.75% Diagnostics::FilterComputePackFlush() 5 0.2684 0.3083 0.3311 12.58% WarpX::InitData() 1 0.3041 0.306 0.3081 11.71% ablastr::utils::communication::ParallelCopy 144 0.1102 0.2077 0.2888 10.98% FabArray::ParallelCopy() 144 0.1098 0.2073 0.2884 10.96% amrex::Copy() 144 0.2456 0.253 0.2648 10.06% FabArray::ParallelCopy_finish() 144 0.01355 0.1124 0.1922 7.30% MultiFab::Copy() 72 0.1189 0.125 0.1318 5.01% FabArray::LinComb() 72 0.07702 0.1001 0.1225 4.66% FabArray::ParallelCopy_nowait() 144 0.09107 0.09446 0.0959 3.64% WarpX::EvolveB() 6 0.08003 0.08366 0.08801 3.34% sample::Coarsen() 12 0.08697 0.0873 0.08776 3.33% FillBoundary_finish() 144 0.01432 0.03375 0.05772 2.19% ablastr::utils::communication::OverrideSync 18 0.0007668 0.02447 0.0446 1.69% FAbArray::OverrideSync() 18 0.0007488 0.02444 0.04457 1.69% OverrideSync_finish() 18 0.0003008 0.0238 0.04395 1.67% FlushFormatPlotfile::WriteToFile() 2 0.03656 0.03837 0.04075 1.55% WriteMultiLevelPlotfile() 2 0.03652 0.0382 0.04019 1.53% VisMF::Write(FabArray) 2 0.03493 0.03691 0.03912 1.49% ablastr::utils::communication::FillBoundary 144 0.02949 0.03009 0.03081 1.17% FabArray::FillBoundary() 126 0.0264 0.02738 0.02853 1.08% FillBoundary_nowait() 144 0.01544 0.02031 0.02515 0.96% WarpX::DampPML() 3 0.006265 0.01106 0.01577 0.60% Other 440 0.00645 0.00882 0.01103 0.42% -------------------------------------------------------------------------------------------- BEGIN REGION WarpX::Evolve() -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- WarpX::OneStep_nosub() 3 1.041 1.067 1.102 41.86% WarpX::MacroscopicEvolveE() 3 0.2849 0.3105 0.3355 12.75% amrex::Copy() 132 0.2269 0.2336 0.2451 9.31% FabArray::setVal() 132 0.2279 0.2322 0.2361 8.97% FabArray::ParallelCopy_finish() 132 0.007282 0.06472 0.1231 4.68% FabArray::LinComb() 66 0.07132 0.09239 0.1127 4.28% WarpX::EvolveB() 6 0.08003 0.08366 0.08801 3.34% FabArray::ParallelCopy_nowait() 132 0.08239 0.08607 0.08758 3.33% FillBoundary_finish() 132 0.01283 0.03272 0.05628 2.14% sample::Coarsen() 6 0.03799 0.03816 0.03856 1.47% FillBoundary_nowait() 132 0.0138 0.0182 0.02269 0.86% PML::Exchange 66 0.01959 0.02043 0.0217 0.82% VisMF::Write(FabArray) 1 0.01745 0.01767 0.01799 0.68% WriteMultiLevelPlotfile() 1 2.699e-05 0.0005456 0.0008732 0.03% FabArray::ParallelCopy() 132 0.0003229 0.0004225 0.0005632 0.02% WarpX::Evolve::step 3 0.0002151 0.0003212 0.0004863 0.02% ablastr::utils::communication::ParallelCopy 132 0.000351 0.0003787 0.0004127 0.02% ablastr::utils::communication::FillBoundary 132 0.0001953 0.0002291 0.0002588 0.01% FlushFormatPlotfile::WriteToFile() 1 1.233e-05 7.393e-05 0.0002513 0.01% MultiFab::Copy() 66 0.0001981 0.0002171 0.0002477 0.01% FabArray::FillBoundary() 114 0.0001279 0.0001308 0.0001344 0.01% Diagnostics::FilterComputePackFlush() 4 4.905e-05 5.32e-05 5.982e-05 0.00% ablastr::utils::communication::OverrideSync 18 1.8e-05 2.316e-05 2.798e-05 0.00% FAbArray::OverrideSync() 18 1.289e-05 1.957e-05 2.556e-05 0.00% OverrideSync_finish() 18 7.723e-06 1.031e-05 1.171e-05 0.00% WarpX::Evolve() 1 2.548e-06 2.915e-06 3.188e-06 0.00% REG::WarpX::Evolve() 1 1.615e-06 2.329e-06 2.758e-06 0.00% Other 371 0.007163 0.0121 0.017 0.65% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- REG::WarpX::Evolve() 1 2.31 2.312 2.314 87.92% WarpX::Evolve() 1 2.31 2.312 2.314 87.92% WarpX::Evolve::step 3 2.187 2.189 2.191 83.24% WarpX::OneStep_nosub() 3 1.915 1.915 1.915 72.78% PML::Exchange 66 0.692 0.731 0.7687 29.21% WarpX::MacroscopicEvolveE() 3 0.2849 0.3105 0.3355 12.75% amrex::Copy() 132 0.2269 0.2336 0.2451 9.31% FabArray::setVal() 132 0.2279 0.2322 0.2361 8.97% ablastr::utils::communication::ParallelCopy 132 0.09611 0.1522 0.2122 8.06% FabArray::ParallelCopy() 132 0.09575 0.1518 0.2118 8.05% Diagnostics::FilterComputePackFlush() 4 0.1231 0.1233 0.1237 4.70% FabArray::ParallelCopy_finish() 132 0.007282 0.06472 0.1231 4.68% MultiFab::Copy() 66 0.11 0.1163 0.1226 4.66% FabArray::LinComb() 66 0.07132 0.09239 0.1127 4.28% FabArray::ParallelCopy_nowait() 132 0.08308 0.08669 0.08819 3.35% WarpX::EvolveB() 6 0.08003 0.08366 0.08801 3.34% FillBoundary_finish() 132 0.01283 0.03272 0.05628 2.14% ablastr::utils::communication::OverrideSync 18 0.0007668 0.02447 0.0446 1.69% FAbArray::OverrideSync() 18 0.0007488 0.02444 0.04457 1.69% OverrideSync_finish() 18 0.0003008 0.0238 0.04395 1.67% sample::Coarsen() 6 0.03799 0.03816 0.03856 1.47% ablastr::utils::communication::FillBoundary 132 0.02663 0.02723 0.02797 1.06% FabArray::FillBoundary() 114 0.02356 0.02454 0.0257 0.98% FillBoundary_nowait() 132 0.01411 0.01852 0.023 0.87% FlushFormatPlotfile::WriteToFile() 1 0.01819 0.01831 0.01837 0.70% WriteMultiLevelPlotfile() 1 0.01811 0.01824 0.01835 0.70% VisMF::Write(FabArray) 1 0.01745 0.01767 0.01799 0.68% Other 371 0.01175 0.01772 0.02377 0.90% -------------------------------------------------------------------------------------------- END REGION WarpX::Evolve() Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [roger_pec_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.TP(nvals = 1) :: [5.4545e-10] [TOP]::my_constants.dx(nvals = 3) :: [Lx, /, nx] [TOP]::my_constants.dy(nvals = 3) :: [Ly, /, ny] [TOP]::my_constants.dz(nvals = 3) :: [Lz, /, nz] [TOP]::my_constants.eps_r_nb(nvals = 1) :: [13.] [TOP]::my_constants.flag_none(nvals = 1) :: [0] [TOP]::my_constants.flag_ss(nvals = 1) :: [2] [TOP]::my_constants.mu_r_nb(nvals = 1) :: [1.0] [TOP]::my_constants.sigma_nb(nvals = 1) :: [1.e7] [TOP]::plt(nvals = 1) :: [roger_pec_plt] Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 4 4 B 5 B 8 B 8192 KiB 8192 KiB 8192 KiB main() 280 3307 B 3308 B 3310 B 3584 B 3584 B 3584 B WarpX::OneStep_nosub() 24 2176 B 2177 B 2178 B 2560 B 2560 B 2560 B WarpX::InitData() 12 735 B 738 B 741 B 768 B 768 B 768 B Unprofiled 88 0 B 0 B 0 B 256 B 256 B 256 B -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------- WarpX::InitData() 286 152 MiB 167 MiB 182 MiB 155 MiB 171 MiB 187 MiB PML::Exchange 1296 3126 KiB 3352 KiB 3483 KiB 10 MiB 10 MiB 11 MiB FillBoundary_nowait() 1074 3068 B 4316 B 5375 B 391 KiB 394 KiB 395 KiB FabArray::ParallelCopy_nowait() 1152 3179 B 3483 B 3936 B 86 KiB 104 KiB 122 KiB --------------------------------------------------------------------------------------------------------------- AMReX (26.05-3-g4ceb814db7d7) finalized