Initializing AMReX (26.06-1-g65060875b0e4)... MPI initialized with 4 MPI processes MPI initialized with thread support level 3 AMReX (26.06-1-g65060875b0e4) initialized WarpX (79466d33388f) _____ __ .__ / _ \________/ |_ ____ _____ |__| ______ / /_\ \_ __ \ __\/ __ \ / \| |/ ___/ / | \ | \/| | \ ___/| Y Y \ |\___ \ \____|__ /__| |__| \___ >__|_| /__/____ > \/ \/ \/ \/ Level 0: dt = 7.703332806e-16 ; dx = 5e-07 ; dy = 5e-07 ; dz = 5e-07 --- INFO : we are in init data of macro Grids Summary: Level 0 4 grids 2097152 cells 100 % of domain smallest grid: 128 x 64 x 64 biggest grid: 128 x 64 x 64 ------------------------------------------------------------------------------- --------------------------- MAIN EM PIC PARAMETERS ---------------------------- ------------------------------------------------------------------------------- Precision: | DOUBLE Particle precision: | DOUBLE Geometry: | 3D (XYZ) Operation mode: | Electromagnetic | - macroscopic | - Lax-Wendroff algorithm ------------------------------------------------------------------------------- Current Deposition: | Esirkepov Particle Pusher: | Boris Charge Deposition: | standard Field Gathering: | energy-conserving Particle Shape Factor:| 0 ------------------------------------------------------------------------------- Maxwell Solver: | Yee ------------------------------------------------------------------------------- For full input parameters, see the file: warpx_used_inputs --- INFO : Writing plotfile diags/plt000000 STEP 1 starts ... Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [roger_pec_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.TP(nvals = 1) :: [5.4545e-10] [TOP]::my_constants.dx(nvals = 3) :: [Lx, /, nx] [TOP]::my_constants.dy(nvals = 3) :: [Ly, /, ny] [TOP]::my_constants.dz(nvals = 3) :: [Lz, /, nz] [TOP]::my_constants.eps_r_nb(nvals = 1) :: [13.] [TOP]::my_constants.flag_none(nvals = 1) :: [0] [TOP]::my_constants.flag_ss(nvals = 1) :: [2] [TOP]::my_constants.mu_r_nb(nvals = 1) :: [1.0] [TOP]::my_constants.sigma_nb(nvals = 1) :: [1.e7] [TOP]::plt(nvals = 1) :: [roger_pec_plt] **** WARNINGS ****************************************************************** * GLOBAL warning list after [ FIRST STEP ] * * --> [! ] [Species] [raised 4 times] * particles.nspecies is ignored. Just use particles.species_names please. * @ Raised by: ALL * ******************************************************************************** STEP 1 ends. TIME = 7.703332806e-16 DT = 7.703332806e-16 Evolve time = 0.865204281 s; This step = 0.865204281 s; Avg. per step = 0.865204281 s STEP 2 starts ... STEP 2 ends. TIME = 1.540666561e-15 DT = 7.703332806e-16 Evolve time = 1.485233149 s; This step = 0.620028868 s; Avg. per step = 0.7426165745 s STEP 3 starts ... STEP 3 ends. TIME = 2.310999842e-15 DT = 7.703332806e-16 Evolve time = 2.17260898 s; This step = 0.687375831 s; Avg. per step = 0.7242029933 s --- INFO : Writing plotfile diags/plt000003 Total Time : 2.555111659 TinyProfiler total time across processes [min...avg...max]: 2.563 ... 2.565 ... 2.566 -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- WarpX::OneStep_nosub() 3 1.013 1.042 1.066 41.54% WarpX::MacroscopicEvolveE() 3 0.2879 0.3171 0.3431 13.37% FabArray::setVal() 177 0.321 0.3316 0.3421 13.33% amrex::Copy() 144 0.2473 0.2532 0.2585 10.07% FabArray::ParallelCopy_finish() 144 0.01628 0.08152 0.1508 5.88% FabArray::LinComb() 72 0.07663 0.09764 0.1178 4.59% FabArray::ParallelCopy_nowait() 144 0.09256 0.09328 0.09388 3.66% WarpX::EvolveB() 6 0.07811 0.08416 0.08915 3.47% sample::Coarsen() 12 0.08256 0.08304 0.08364 3.26% FillBoundary_finish() 144 0.01566 0.03935 0.05785 2.25% WarpX::InitData() 1 0.03267 0.03604 0.03952 1.54% VisMF::Write(FabArray) 2 0.03439 0.03479 0.03558 1.39% PML::Exchange 72 0.02314 0.02378 0.02507 0.98% FillBoundary_nowait() 144 0.01499 0.0197 0.02457 0.96% WarpX::DampPML() 3 0.007459 0.01129 0.01709 0.67% main() 1 0.001009 0.001525 0.001844 0.07% WriteMultiLevelPlotfile() 2 0.0004818 0.001133 0.001519 0.06% FlushFormatPlotfile::WriteToFile() 2 3.375e-05 0.00022 0.0007603 0.03% FabArray::ParallelCopy() 144 0.0003576 0.0004788 0.0005403 0.02% ablastr::utils::communication::ParallelCopy 144 0.0003523 0.000411 0.0004823 0.02% WarpX::Evolve::step 3 0.0002041 0.0003221 0.0004801 0.02% ablastr::utils::communication::FillBoundary 144 0.0002306 0.0002407 0.0002608 0.01% MultiFab::Copy() 72 0.0001886 0.0002129 0.0002332 0.01% FabArray::FillBoundary() 126 0.000127 0.0001364 0.000152 0.01% Diagnostics::FilterComputePackFlush() 5 9.696e-05 0.000102 0.0001077 0.00% ablastr::utils::communication::OverrideSync 18 1.943e-05 2.269e-05 2.589e-05 0.00% FAbArray::OverrideSync() 18 1.761e-05 1.851e-05 2.028e-05 0.00% OverrideSync_finish() 18 1.041e-05 1.113e-05 1.2e-05 0.00% REG::WarpX::Evolve() 1 1.868e-06 2.523e-06 3.503e-06 0.00% WarpX::Evolve() 1 2.534e-06 2.958e-06 3.394e-06 0.00% Other 440 0.001329 0.002191 0.004102 0.16% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- main() 1 2.555 2.555 2.555 99.57% REG::WarpX::Evolve() 1 2.294 2.294 2.295 89.42% WarpX::Evolve() 1 2.294 2.294 2.295 89.42% WarpX::Evolve::step 3 2.173 2.173 2.174 84.71% WarpX::OneStep_nosub() 3 1.905 1.905 1.906 74.26% PML::Exchange 72 0.7627 0.8111 0.862 33.59% WarpX::MacroscopicEvolveE() 3 0.2879 0.3171 0.3431 13.37% FabArray::setVal() 177 0.321 0.3316 0.3421 13.33% Diagnostics::FilterComputePackFlush() 5 0.2605 0.2715 0.2834 11.04% WarpX::InitData() 1 0.2587 0.259 0.2597 10.12% amrex::Copy() 144 0.2473 0.2532 0.2585 10.07% ablastr::utils::communication::ParallelCopy 144 0.1118 0.1765 0.2452 9.56% FabArray::ParallelCopy() 144 0.1114 0.1761 0.2447 9.54% FabArray::ParallelCopy_finish() 144 0.01628 0.08152 0.1508 5.88% MultiFab::Copy() 72 0.1203 0.1259 0.1316 5.13% FabArray::LinComb() 72 0.07663 0.09764 0.1178 4.59% FabArray::ParallelCopy_nowait() 144 0.09341 0.09413 0.09461 3.69% WarpX::EvolveB() 6 0.07811 0.08416 0.08915 3.47% sample::Coarsen() 12 0.08256 0.08304 0.08364 3.26% FillBoundary_finish() 144 0.01566 0.03935 0.05785 2.25% ablastr::utils::communication::OverrideSync 18 0.01135 0.03056 0.04691 1.83% FAbArray::OverrideSync() 18 0.01133 0.03054 0.04688 1.83% OverrideSync_finish() 18 0.01059 0.02989 0.04609 1.80% FlushFormatPlotfile::WriteToFile() 2 0.03522 0.0362 0.03787 1.48% WriteMultiLevelPlotfile() 2 0.03518 0.03598 0.03711 1.45% VisMF::Write(FabArray) 2 0.03439 0.03479 0.03558 1.39% ablastr::utils::communication::FillBoundary 144 0.02894 0.02943 0.02996 1.17% FabArray::FillBoundary() 126 0.02573 0.02669 0.02761 1.08% FillBoundary_nowait() 144 0.01544 0.02016 0.02503 0.98% WarpX::DampPML() 3 0.007459 0.01129 0.01709 0.67% Other 440 0.006435 0.01001 0.01714 0.67% -------------------------------------------------------------------------------------------- BEGIN REGION WarpX::Evolve() -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- WarpX::OneStep_nosub() 3 1.013 1.042 1.066 41.54% WarpX::MacroscopicEvolveE() 3 0.2879 0.3171 0.3431 13.37% amrex::Copy() 132 0.228 0.2334 0.238 9.27% FabArray::setVal() 132 0.2318 0.2326 0.2336 9.10% FabArray::ParallelCopy_finish() 132 0.01275 0.06427 0.1197 4.67% FabArray::LinComb() 66 0.07041 0.09011 0.109 4.25% WarpX::EvolveB() 6 0.07811 0.08416 0.08915 3.47% FabArray::ParallelCopy_nowait() 132 0.08485 0.08555 0.08606 3.35% FillBoundary_finish() 132 0.01517 0.03844 0.05656 2.20% sample::Coarsen() 6 0.03564 0.03582 0.03623 1.41% FillBoundary_nowait() 132 0.01377 0.01807 0.02256 0.88% PML::Exchange 66 0.0201 0.02092 0.02218 0.86% VisMF::Write(FabArray) 1 0.01767 0.01787 0.01824 0.71% WriteMultiLevelPlotfile() 1 0.0002006 0.0004342 0.0005903 0.02% FabArray::ParallelCopy() 132 0.000336 0.0004482 0.0005204 0.02% WarpX::Evolve::step 3 0.0002041 0.0003221 0.0004801 0.02% ablastr::utils::communication::ParallelCopy 132 0.0003314 0.0003866 0.0004553 0.02% FlushFormatPlotfile::WriteToFile() 1 1.334e-05 7.364e-05 0.000248 0.01% ablastr::utils::communication::FillBoundary 132 0.0002139 0.0002223 0.0002417 0.01% MultiFab::Copy() 66 0.0001772 0.0001989 0.0002168 0.01% FabArray::FillBoundary() 114 0.0001178 0.0001264 0.0001423 0.01% Diagnostics::FilterComputePackFlush() 4 4.706e-05 5.127e-05 5.365e-05 0.00% ablastr::utils::communication::OverrideSync 18 1.943e-05 2.269e-05 2.589e-05 0.00% FAbArray::OverrideSync() 18 1.761e-05 1.851e-05 2.028e-05 0.00% OverrideSync_finish() 18 1.041e-05 1.113e-05 1.2e-05 0.00% REG::WarpX::Evolve() 1 1.868e-06 2.523e-06 3.503e-06 0.00% WarpX::Evolve() 1 2.534e-06 2.958e-06 3.394e-06 0.00% Other 371 0.008336 0.01234 0.01848 0.72% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- REG::WarpX::Evolve() 1 2.294 2.294 2.295 89.42% WarpX::Evolve() 1 2.294 2.294 2.295 89.42% WarpX::Evolve::step 3 2.173 2.173 2.174 84.71% WarpX::OneStep_nosub() 3 1.905 1.905 1.906 74.26% PML::Exchange 66 0.6907 0.7285 0.7688 29.96% WarpX::MacroscopicEvolveE() 3 0.2879 0.3171 0.3431 13.37% amrex::Copy() 132 0.228 0.2334 0.238 9.27% FabArray::setVal() 132 0.2318 0.2326 0.2336 9.10% ablastr::utils::communication::ParallelCopy 132 0.1002 0.1513 0.2061 8.03% FabArray::ParallelCopy() 132 0.09988 0.1509 0.2057 8.01% MultiFab::Copy() 66 0.112 0.1169 0.1219 4.75% Diagnostics::FilterComputePackFlush() 4 0.1208 0.1211 0.1216 4.74% FabArray::ParallelCopy_finish() 132 0.01275 0.06427 0.1197 4.67% FabArray::LinComb() 66 0.07041 0.09011 0.109 4.25% WarpX::EvolveB() 6 0.07811 0.08416 0.08915 3.47% FabArray::ParallelCopy_nowait() 132 0.08547 0.08619 0.08661 3.37% FillBoundary_finish() 132 0.01517 0.03844 0.05656 2.20% ablastr::utils::communication::OverrideSync 18 0.01135 0.03056 0.04691 1.83% FAbArray::OverrideSync() 18 0.01133 0.03054 0.04688 1.83% OverrideSync_finish() 18 0.01059 0.02989 0.04609 1.80% sample::Coarsen() 6 0.03564 0.03582 0.03623 1.41% ablastr::utils::communication::FillBoundary 132 0.02619 0.0267 0.02723 1.06% FabArray::FillBoundary() 114 0.023 0.02398 0.0249 0.97% FillBoundary_nowait() 132 0.01408 0.01837 0.02286 0.89% FlushFormatPlotfile::WriteToFile() 1 0.01811 0.0184 0.01907 0.74% WriteMultiLevelPlotfile() 1 0.0181 0.01833 0.01882 0.73% VisMF::Write(FabArray) 1 0.01767 0.01787 0.01824 0.71% Other 371 0.01296 0.01804 0.02527 0.98% -------------------------------------------------------------------------------------------- END REGION WarpX::Evolve() Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [roger_pec_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.TP(nvals = 1) :: [5.4545e-10] [TOP]::my_constants.dx(nvals = 3) :: [Lx, /, nx] [TOP]::my_constants.dy(nvals = 3) :: [Ly, /, ny] [TOP]::my_constants.dz(nvals = 3) :: [Lz, /, nz] [TOP]::my_constants.eps_r_nb(nvals = 1) :: [13.] [TOP]::my_constants.flag_none(nvals = 1) :: [0] [TOP]::my_constants.flag_ss(nvals = 1) :: [2] [TOP]::my_constants.mu_r_nb(nvals = 1) :: [1.0] [TOP]::my_constants.sigma_nb(nvals = 1) :: [1.e7] [TOP]::plt(nvals = 1) :: [roger_pec_plt] Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 4 5 B 6 B 10 B 8192 KiB 8192 KiB 8192 KiB main() 280 3307 B 3309 B 3312 B 3584 B 3584 B 3584 B WarpX::OneStep_nosub() 24 2220 B 2221 B 2223 B 2560 B 2560 B 2560 B WarpX::InitData() 12 736 B 738 B 741 B 768 B 768 B 768 B Unprofiled 88 0 B 0 B 0 B 256 B 256 B 256 B -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------- WarpX::InitData() 286 152 MiB 167 MiB 182 MiB 155 MiB 171 MiB 187 MiB PML::Exchange 1296 3201 KiB 3298 KiB 3405 KiB 10 MiB 10 MiB 11 MiB FillBoundary_nowait() 1074 3583 B 4461 B 5800 B 391 KiB 394 KiB 395 KiB FabArray::ParallelCopy_nowait() 1152 3149 B 3312 B 3481 B 86 KiB 104 KiB 122 KiB --------------------------------------------------------------------------------------------------------------- AMReX (26.06-1-g65060875b0e4) finalized