Initializing AMReX (26.06-5-g65db2e4e678a)... MPI initialized with 4 MPI processes MPI initialized with thread support level 3 AMReX (26.06-5-g65db2e4e678a) initialized WarpX (79466d33388f) _____ __ .__ / _ \________/ |_ ____ _____ |__| ______ / /_\ \_ __ \ __\/ __ \ / \| |/ ___/ / | \ | \/| | \ ___/| Y Y \ |\___ \ \____|__ /__| |__| \___ >__|_| /__/____ > \/ \/ \/ \/ Level 0: dt = 7.703332806e-16 ; dx = 5e-07 ; dy = 5e-07 ; dz = 5e-07 --- INFO : we are in init data of macro Grids Summary: Level 0 4 grids 2097152 cells 100 % of domain smallest grid: 128 x 64 x 64 biggest grid: 128 x 64 x 64 ------------------------------------------------------------------------------- --------------------------- MAIN EM PIC PARAMETERS ---------------------------- ------------------------------------------------------------------------------- Precision: | DOUBLE Particle precision: | DOUBLE Geometry: | 3D (XYZ) Operation mode: | Electromagnetic | - macroscopic | - Lax-Wendroff algorithm ------------------------------------------------------------------------------- Current Deposition: | Esirkepov Particle Pusher: | Boris Charge Deposition: | standard Field Gathering: | energy-conserving Particle Shape Factor:| 0 ------------------------------------------------------------------------------- Maxwell Solver: | Yee ------------------------------------------------------------------------------- For full input parameters, see the file: warpx_used_inputs --- INFO : Writing plotfile diags/plt000000 STEP 1 starts ... Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [roger_pec_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.TP(nvals = 1) :: [5.4545e-10] [TOP]::my_constants.dx(nvals = 3) :: [Lx, /, nx] [TOP]::my_constants.dy(nvals = 3) :: [Ly, /, ny] [TOP]::my_constants.dz(nvals = 3) :: [Lz, /, nz] [TOP]::my_constants.eps_r_nb(nvals = 1) :: [13.] [TOP]::my_constants.flag_none(nvals = 1) :: [0] [TOP]::my_constants.flag_ss(nvals = 1) :: [2] [TOP]::my_constants.mu_r_nb(nvals = 1) :: [1.0] [TOP]::my_constants.sigma_nb(nvals = 1) :: [1.e7] [TOP]::plt(nvals = 1) :: [roger_pec_plt] **** WARNINGS ****************************************************************** * GLOBAL warning list after [ FIRST STEP ] * * --> [! ] [Species] [raised 4 times] * particles.nspecies is ignored. Just use particles.species_names please. * @ Raised by: ALL * ******************************************************************************** STEP 1 ends. TIME = 7.703332806e-16 DT = 7.703332806e-16 Evolve time = 0.856615068 s; This step = 0.856615068 s; Avg. per step = 0.856615068 s STEP 2 starts ... STEP 2 ends. TIME = 1.540666561e-15 DT = 7.703332806e-16 Evolve time = 1.461396963 s; This step = 0.604781895 s; Avg. per step = 0.7306984815 s STEP 3 starts ... STEP 3 ends. TIME = 2.310999842e-15 DT = 7.703332806e-16 Evolve time = 2.148066649 s; This step = 0.686669686 s; Avg. per step = 0.7160222163 s --- INFO : Writing plotfile diags/plt000003 Total Time : 2.546848499 TinyProfiler total time across processes [min...avg...max]: 2.55 ... 2.554 ... 2.56 -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- WarpX::OneStep_nosub() 3 0.9984 1.025 1.042 40.71% WarpX::MacroscopicEvolveE() 3 0.287 0.3155 0.3496 13.66% FabArray::setVal() 177 0.3236 0.3329 0.3455 13.50% amrex::Copy() 144 0.2487 0.2557 0.2674 10.44% FabArray::ParallelCopy_finish() 144 0.01432 0.07903 0.141 5.51% FabArray::LinComb() 72 0.07648 0.09795 0.1188 4.64% WarpX::EvolveB() 6 0.07973 0.08873 0.09752 3.81% FabArray::ParallelCopy_nowait() 144 0.09003 0.09466 0.09683 3.78% sample::Coarsen() 12 0.08894 0.08937 0.09052 3.54% FillBoundary_finish() 144 0.005944 0.02657 0.04034 1.58% WarpX::InitData() 1 0.03055 0.03312 0.03579 1.40% VisMF::Write(FabArray) 2 0.03448 0.03502 0.03572 1.40% PML::Exchange 72 0.02182 0.02348 0.02595 1.01% FillBoundary_nowait() 144 0.0149 0.01971 0.02423 0.95% WarpX::DampPML() 3 0.006585 0.01184 0.02273 0.89% DistributionMapping::LeastUsedCPUs() 1 1.502e-05 0.00418 0.008569 0.33% main() 1 0.001835 0.002436 0.002916 0.11% WriteMultiLevelPlotfile() 2 2.943e-05 0.001275 0.00211 0.08% FlushFormatPlotfile::WriteToFile() 2 3.603e-05 0.0001922 0.0006572 0.03% FabArray::ParallelCopy() 144 0.0003744 0.0004515 0.0005701 0.02% ablastr::utils::communication::ParallelCopy 144 0.0003505 0.0004179 0.0005053 0.02% WarpX::Evolve::step 3 0.0001627 0.0002882 0.0004813 0.02% FabArray::FillBoundary() 126 0.0001333 0.0001864 0.0003358 0.01% ablastr::utils::communication::FillBoundary 144 0.000223 0.0002438 0.0002573 0.01% MultiFab::Copy() 72 0.0002111 0.0002215 0.0002304 0.01% Diagnostics::FilterComputePackFlush() 5 9.532e-05 0.000107 0.0001195 0.00% ablastr::utils::communication::OverrideSync 18 1.447e-05 2.059e-05 2.829e-05 0.00% FAbArray::OverrideSync() 18 1.44e-05 1.825e-05 2.259e-05 0.00% ParticleContainer::Redistribute_impl() 1 1.345e-05 1.444e-05 1.558e-05 0.00% ParticleCopyPlan::build 1 3.414e-06 8.33e-06 1.279e-05 0.00% OverrideSync_finish() 18 1.056e-05 1.13e-05 1.24e-05 0.00% AmrMesh::MakeDistributionMap() 1 2.573e-06 7.605e-06 1.07e-05 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.732e-06 5.628e-06 6.05e-06 0.00% WarpX::Evolve() 1 2.096e-06 2.79e-06 4.029e-06 0.00% REG::WarpX::Evolve() 1 1.83e-06 2.177e-06 2.324e-06 0.00% Other 435 0.001313 0.004644 0.009201 0.36% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- main() 1 2.539 2.543 2.547 99.49% REG::WarpX::Evolve() 1 2.273 2.273 2.273 88.80% WarpX::Evolve() 1 2.273 2.273 2.273 88.80% WarpX::Evolve::step 3 2.148 2.149 2.149 83.94% WarpX::OneStep_nosub() 3 1.88 1.881 1.881 73.47% PML::Exchange 72 0.7602 0.8111 0.8521 33.29% WarpX::MacroscopicEvolveE() 3 0.287 0.3155 0.3496 13.66% FabArray::setVal() 177 0.3236 0.3329 0.3455 13.50% Diagnostics::FilterComputePackFlush() 5 0.2664 0.2767 0.2878 11.24% WarpX::InitData() 1 0.263 0.2673 0.2715 10.60% amrex::Copy() 144 0.2487 0.2557 0.2674 10.44% ablastr::utils::communication::ParallelCopy 144 0.1127 0.1754 0.2386 9.32% FabArray::ParallelCopy() 144 0.1124 0.175 0.2381 9.30% FabArray::ParallelCopy_finish() 144 0.01432 0.07903 0.141 5.51% MultiFab::Copy() 72 0.1225 0.1273 0.1345 5.25% FabArray::LinComb() 72 0.07648 0.09795 0.1188 4.64% FabArray::ParallelCopy_nowait() 144 0.09088 0.09552 0.09764 3.81% WarpX::EvolveB() 6 0.07973 0.08873 0.09752 3.81% sample::Coarsen() 12 0.08894 0.08937 0.09052 3.54% FillBoundary_finish() 144 0.005944 0.02657 0.04034 1.58% FlushFormatPlotfile::WriteToFile() 2 0.03539 0.03654 0.03796 1.48% WriteMultiLevelPlotfile() 2 0.03535 0.03634 0.0373 1.46% VisMF::Write(FabArray) 2 0.03448 0.03502 0.03572 1.40% ablastr::utils::communication::OverrideSync 18 0.0009275 0.01764 0.03548 1.39% FAbArray::OverrideSync() 18 0.000913 0.01762 0.03545 1.38% OverrideSync_finish() 18 0.0001841 0.01699 0.03472 1.36% ablastr::utils::communication::FillBoundary 144 0.02916 0.02963 0.03015 1.18% FabArray::FillBoundary() 126 0.02604 0.02696 0.02793 1.09% FillBoundary_nowait() 144 0.01536 0.02017 0.02472 0.97% WarpX::DampPML() 3 0.006585 0.01184 0.02273 0.89% AmrMesh::MakeDistributionMap() 1 2.392e-05 0.004195 0.008586 0.34% DistributionMapping::SFCProcessorMapDoIt() 1 2.135e-05 0.004188 0.008577 0.34% DistributionMapping::LeastUsedCPUs() 1 1.502e-05 0.00418 0.008569 0.33% ParticleContainer::Redistribute_impl() 1 0.0001238 0.00321 0.007319 0.29% ParticleCopyPlan::build 1 2.425e-05 0.0031 0.007216 0.28% Other 435 0.006073 0.0136 0.02337 0.91% -------------------------------------------------------------------------------------------- BEGIN REGION WarpX::Evolve() -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- WarpX::OneStep_nosub() 3 0.9984 1.025 1.042 40.71% WarpX::MacroscopicEvolveE() 3 0.287 0.3155 0.3496 13.66% amrex::Copy() 132 0.2285 0.2359 0.2464 9.62% FabArray::setVal() 132 0.2274 0.2312 0.2341 9.14% FabArray::ParallelCopy_finish() 132 0.007351 0.06309 0.1143 4.46% FabArray::LinComb() 66 0.0708 0.09037 0.11 4.30% WarpX::EvolveB() 6 0.07973 0.08873 0.09752 3.81% FabArray::ParallelCopy_nowait() 132 0.08286 0.08691 0.08902 3.48% FillBoundary_finish() 132 0.005492 0.02568 0.03984 1.56% sample::Coarsen() 6 0.03875 0.03901 0.03965 1.55% PML::Exchange 66 0.01936 0.02072 0.02284 0.89% WarpX::DampPML() 3 0.006585 0.01184 0.02273 0.89% FillBoundary_nowait() 132 0.01369 0.01808 0.02222 0.87% VisMF::Write(FabArray) 1 0.01737 0.01781 0.01816 0.71% WriteMultiLevelPlotfile() 1 1.42e-05 0.0006634 0.001076 0.04% FabArray::ParallelCopy() 132 0.0003532 0.0004243 0.0005382 0.02% WarpX::Evolve::step 3 0.0001627 0.0002882 0.0004813 0.02% ablastr::utils::communication::ParallelCopy 132 0.0003261 0.000395 0.0004801 0.02% FabArray::FillBoundary() 114 0.0001238 0.0001762 0.0003256 0.01% FlushFormatPlotfile::WriteToFile() 1 1.248e-05 7.239e-05 0.0002436 0.01% ablastr::utils::communication::FillBoundary 132 0.0002068 0.0002263 0.0002389 0.01% MultiFab::Copy() 66 0.0002011 0.0002098 0.0002185 0.01% Diagnostics::FilterComputePackFlush() 4 5.153e-05 5.636e-05 6.477e-05 0.00% ablastr::utils::communication::OverrideSync 18 1.447e-05 2.059e-05 2.829e-05 0.00% FAbArray::OverrideSync() 18 1.44e-05 1.825e-05 2.259e-05 0.00% OverrideSync_finish() 18 1.056e-05 1.13e-05 1.24e-05 0.00% WarpX::Evolve() 1 2.096e-06 2.79e-06 4.029e-06 0.00% REG::WarpX::Evolve() 1 1.83e-06 2.177e-06 2.324e-06 0.00% Other 368 0.0008789 0.001055 0.001312 0.05% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- REG::WarpX::Evolve() 1 2.273 2.273 2.273 88.80% WarpX::Evolve() 1 2.273 2.273 2.273 88.80% WarpX::Evolve::step 3 2.148 2.149 2.149 83.94% WarpX::OneStep_nosub() 3 1.88 1.881 1.881 73.47% PML::Exchange 66 0.6881 0.7299 0.761 29.73% WarpX::MacroscopicEvolveE() 3 0.287 0.3155 0.3496 13.66% amrex::Copy() 132 0.2285 0.2359 0.2464 9.62% FabArray::setVal() 132 0.2274 0.2312 0.2341 9.14% ablastr::utils::communication::ParallelCopy 132 0.09771 0.1515 0.2037 7.96% FabArray::ParallelCopy() 132 0.09734 0.1511 0.2032 7.94% Diagnostics::FilterComputePackFlush() 4 0.124 0.1245 0.125 4.88% MultiFab::Copy() 66 0.1136 0.1186 0.1249 4.88% FabArray::ParallelCopy_finish() 132 0.007351 0.06309 0.1143 4.46% FabArray::LinComb() 66 0.0708 0.09037 0.11 4.30% WarpX::EvolveB() 6 0.07973 0.08873 0.09752 3.81% FabArray::ParallelCopy_nowait() 132 0.08351 0.08756 0.08963 3.50% FillBoundary_finish() 132 0.005492 0.02568 0.03984 1.56% sample::Coarsen() 6 0.03875 0.03901 0.03965 1.55% ablastr::utils::communication::OverrideSync 18 0.0009275 0.01764 0.03548 1.39% FAbArray::OverrideSync() 18 0.000913 0.01762 0.03545 1.38% OverrideSync_finish() 18 0.0001841 0.01699 0.03472 1.36% ablastr::utils::communication::FillBoundary 132 0.02644 0.02693 0.02747 1.07% FabArray::FillBoundary() 114 0.02334 0.02427 0.02526 0.99% WarpX::DampPML() 3 0.006585 0.01184 0.02273 0.89% FillBoundary_nowait() 132 0.014 0.01838 0.02253 0.88% FlushFormatPlotfile::WriteToFile() 1 0.01803 0.01857 0.01918 0.75% WriteMultiLevelPlotfile() 1 0.01802 0.0185 0.01894 0.74% VisMF::Write(FabArray) 1 0.01737 0.01781 0.01816 0.71% Other 368 0.005306 0.006598 0.007893 0.31% -------------------------------------------------------------------------------------------- END REGION WarpX::Evolve() Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [roger_pec_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.TP(nvals = 1) :: [5.4545e-10] [TOP]::my_constants.dx(nvals = 3) :: [Lx, /, nx] [TOP]::my_constants.dy(nvals = 3) :: [Ly, /, ny] [TOP]::my_constants.dz(nvals = 3) :: [Lz, /, nz] [TOP]::my_constants.eps_r_nb(nvals = 1) :: [13.] [TOP]::my_constants.flag_none(nvals = 1) :: [0] [TOP]::my_constants.flag_ss(nvals = 1) :: [2] [TOP]::my_constants.mu_r_nb(nvals = 1) :: [1.0] [TOP]::my_constants.sigma_nb(nvals = 1) :: [1.e7] [TOP]::plt(nvals = 1) :: [roger_pec_plt] Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 4 4 B 7 B 10 B 8192 KiB 8192 KiB 8192 KiB main() 280 3296 B 3301 B 3309 B 3584 B 3584 B 3584 B WarpX::OneStep_nosub() 24 2203 B 2205 B 2208 B 2560 B 2560 B 2560 B WarpX::InitData() 12 731 B 733 B 736 B 768 B 768 B 768 B Unprofiled 88 0 B 0 B 0 B 256 B 256 B 256 B -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------- WarpX::InitData() 286 151 MiB 166 MiB 181 MiB 155 MiB 171 MiB 187 MiB PML::Exchange 1296 3198 KiB 3307 KiB 3371 KiB 10 MiB 10 MiB 11 MiB FillBoundary_nowait() 1074 3193 B 4106 B 5416 B 391 KiB 394 KiB 395 KiB FabArray::ParallelCopy_nowait() 1152 2992 B 3389 B 3746 B 86 KiB 104 KiB 122 KiB --------------------------------------------------------------------------------------------------------------- AMReX (26.06-5-g65db2e4e678a) finalized