Initializing AMReX (26.06-8-g5bee7705813e)... MPI initialized with 4 MPI processes MPI initialized with thread support level 3 AMReX (26.06-8-g5bee7705813e) initialized WarpX (79466d33388f) _____ __ .__ / _ \________/ |_ ____ _____ |__| ______ / /_\ \_ __ \ __\/ __ \ / \| |/ ___/ / | \ | \/| | \ ___/| Y Y \ |\___ \ \____|__ /__| |__| \___ >__|_| /__/____ > \/ \/ \/ \/ Level 0: dt = 7.703332806e-16 ; dx = 5e-07 ; dy = 5e-07 ; dz = 5e-07 --- INFO : we are in init data of macro Grids Summary: Level 0 4 grids 2097152 cells 100 % of domain smallest grid: 128 x 64 x 64 biggest grid: 128 x 64 x 64 ------------------------------------------------------------------------------- --------------------------- MAIN EM PIC PARAMETERS ---------------------------- ------------------------------------------------------------------------------- Precision: | DOUBLE Particle precision: | DOUBLE Geometry: | 3D (XYZ) Operation mode: | Electromagnetic | - macroscopic | - Lax-Wendroff algorithm ------------------------------------------------------------------------------- Current Deposition: | Esirkepov Particle Pusher: | Boris Charge Deposition: | standard Field Gathering: | energy-conserving Particle Shape Factor:| 0 ------------------------------------------------------------------------------- Maxwell Solver: | Yee ------------------------------------------------------------------------------- For full input parameters, see the file: warpx_used_inputs --- INFO : Writing plotfile diags/plt000000 STEP 1 starts ... Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [roger_pec_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.TP(nvals = 1) :: [5.4545e-10] [TOP]::my_constants.dx(nvals = 3) :: [Lx, /, nx] [TOP]::my_constants.dy(nvals = 3) :: [Ly, /, ny] [TOP]::my_constants.dz(nvals = 3) :: [Lz, /, nz] [TOP]::my_constants.eps_r_nb(nvals = 1) :: [13.] [TOP]::my_constants.flag_none(nvals = 1) :: [0] [TOP]::my_constants.flag_ss(nvals = 1) :: [2] [TOP]::my_constants.mu_r_nb(nvals = 1) :: [1.0] [TOP]::my_constants.sigma_nb(nvals = 1) :: [1.e7] [TOP]::plt(nvals = 1) :: [roger_pec_plt] **** WARNINGS ****************************************************************** * GLOBAL warning list after [ FIRST STEP ] * * --> [! ] [Species] [raised 4 times] * particles.nspecies is ignored. Just use particles.species_names please. * @ Raised by: ALL * ******************************************************************************** STEP 1 ends. TIME = 7.703332806e-16 DT = 7.703332806e-16 Evolve time = 0.85374328 s; This step = 0.85374328 s; Avg. per step = 0.85374328 s STEP 2 starts ... STEP 2 ends. TIME = 1.540666561e-15 DT = 7.703332806e-16 Evolve time = 1.459845593 s; This step = 0.606102313 s; Avg. per step = 0.7299227965 s STEP 3 starts ... STEP 3 ends. TIME = 2.310999842e-15 DT = 7.703332806e-16 Evolve time = 2.134608052 s; This step = 0.674762459 s; Avg. per step = 0.7115360173 s --- INFO : Writing plotfile diags/plt000003 Total Time : 2.521970294 TinyProfiler total time across processes [min...avg...max]: 2.529 ... 2.532 ... 2.535 -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- WarpX::OneStep_nosub() 3 0.9997 1.018 1.035 40.83% FabArray::setVal() 177 0.321 0.3307 0.3398 13.40% WarpX::MacroscopicEvolveE() 3 0.2858 0.3114 0.3378 13.33% amrex::Copy() 144 0.2488 0.2552 0.2659 10.49% FabArray::ParallelCopy_finish() 144 0.01277 0.07013 0.1295 5.11% FabArray::LinComb() 72 0.07852 0.09922 0.1206 4.76% WarpX::EvolveB() 6 0.07725 0.0932 0.1011 3.99% FabArray::ParallelCopy_nowait() 144 0.09222 0.09469 0.09889 3.90% sample::Coarsen() 12 0.08695 0.08738 0.08836 3.49% FillBoundary_finish() 144 0.01518 0.02513 0.05097 2.01% VisMF::Write(FabArray) 2 0.03512 0.03607 0.03705 1.46% WarpX::InitData() 1 0.03014 0.0331 0.03643 1.44% PML::Exchange 72 0.02178 0.02311 0.02571 1.01% FillBoundary_nowait() 144 0.01612 0.02034 0.02517 0.99% WarpX::DampPML() 3 0.009913 0.01503 0.01821 0.72% main() 1 0.001171 0.001604 0.002361 0.09% WriteMultiLevelPlotfile() 2 0.0005103 0.001061 0.001419 0.06% FlushFormatPlotfile::WriteToFile() 2 3.246e-05 0.0002011 0.0006833 0.03% FabArray::ParallelCopy() 144 0.0003488 0.0004271 0.0005004 0.02% ablastr::utils::communication::ParallelCopy 144 0.0003603 0.0004333 0.0004809 0.02% WarpX::Evolve::step 3 0.0001692 0.0002975 0.0004747 0.02% ablastr::utils::communication::FillBoundary 144 0.0002295 0.0002563 0.0002881 0.01% MultiFab::Copy() 72 0.0002103 0.000235 0.0002577 0.01% FabArray::FillBoundary() 126 0.0001322 0.0001456 0.0001601 0.01% Diagnostics::FilterComputePackFlush() 5 0.0001142 0.000118 0.0001209 0.00% ablastr::utils::communication::OverrideSync 18 1.891e-05 2.364e-05 3.261e-05 0.00% FAbArray::OverrideSync() 18 1.883e-05 2.048e-05 2.367e-05 0.00% OverrideSync_finish() 18 1.235e-05 1.374e-05 1.48e-05 0.00% WarpX::Evolve() 1 2.576e-06 2.977e-06 3.401e-06 0.00% REG::WarpX::Evolve() 1 2.562e-06 2.816e-06 3.249e-06 0.00% Other 440 0.001361 0.003523 0.006037 0.24% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- main() 1 2.52 2.521 2.522 99.49% REG::WarpX::Evolve() 1 2.259 2.259 2.26 89.15% WarpX::Evolve() 1 2.259 2.259 2.26 89.15% WarpX::Evolve::step 3 2.135 2.136 2.136 84.27% WarpX::OneStep_nosub() 3 1.867 1.867 1.868 73.68% PML::Exchange 72 0.7626 0.804 0.8513 33.58% FabArray::setVal() 177 0.321 0.3307 0.3398 13.40% WarpX::MacroscopicEvolveE() 3 0.2858 0.3114 0.3378 13.33% Diagnostics::FilterComputePackFlush() 5 0.2669 0.2779 0.2892 11.41% amrex::Copy() 144 0.2488 0.2552 0.2659 10.49% WarpX::InitData() 1 0.2586 0.2602 0.2616 10.32% ablastr::utils::communication::ParallelCopy 144 0.1072 0.1665 0.2235 8.82% FabArray::ParallelCopy() 144 0.1068 0.1661 0.2231 8.80% MultiFab::Copy() 72 0.1219 0.1273 0.1347 5.31% FabArray::ParallelCopy_finish() 144 0.01277 0.07013 0.1295 5.11% FabArray::LinComb() 72 0.07852 0.09922 0.1206 4.76% WarpX::EvolveB() 6 0.07725 0.0932 0.1011 3.99% FabArray::ParallelCopy_nowait() 144 0.09307 0.09553 0.09988 3.94% sample::Coarsen() 12 0.08695 0.08738 0.08836 3.49% FillBoundary_finish() 144 0.01518 0.02513 0.05097 2.01% FlushFormatPlotfile::WriteToFile() 2 0.03652 0.03739 0.03893 1.54% WriteMultiLevelPlotfile() 2 0.03647 0.03719 0.03824 1.51% ablastr::utils::communication::OverrideSync 18 0.003711 0.01581 0.03787 1.49% FAbArray::OverrideSync() 18 0.00369 0.01578 0.03784 1.49% VisMF::Write(FabArray) 2 0.03512 0.03607 0.03705 1.46% OverrideSync_finish() 18 0.003058 0.01506 0.03702 1.46% ablastr::utils::communication::FillBoundary 144 0.0302 0.03065 0.03117 1.23% FabArray::FillBoundary() 126 0.02682 0.02765 0.02846 1.12% FillBoundary_nowait() 144 0.01658 0.02081 0.02566 1.01% WarpX::DampPML() 3 0.009913 0.01503 0.01821 0.72% Other 440 0.00691 0.01483 0.02393 0.94% -------------------------------------------------------------------------------------------- BEGIN REGION WarpX::Evolve() -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- WarpX::OneStep_nosub() 3 0.9997 1.018 1.035 40.83% WarpX::MacroscopicEvolveE() 3 0.2858 0.3114 0.3378 13.33% amrex::Copy() 132 0.2297 0.2358 0.2456 9.69% FabArray::setVal() 132 0.2303 0.2315 0.2327 9.18% FabArray::LinComb() 66 0.07235 0.09175 0.1121 4.42% WarpX::EvolveB() 6 0.07725 0.0932 0.1011 3.99% FabArray::ParallelCopy_finish() 132 0.007717 0.05302 0.09821 3.87% FabArray::ParallelCopy_nowait() 132 0.08479 0.087 0.09076 3.58% FillBoundary_finish() 132 0.01464 0.02399 0.04945 1.95% sample::Coarsen() 6 0.0379 0.03808 0.0385 1.52% FillBoundary_nowait() 132 0.01487 0.01869 0.02297 0.91% PML::Exchange 66 0.01917 0.02026 0.02254 0.89% VisMF::Write(FabArray) 1 0.0176 0.01813 0.01848 0.73% WarpX::DampPML() 3 0.009913 0.01503 0.01821 0.72% WriteMultiLevelPlotfile() 1 0.0001961 0.0004457 0.0006004 0.02% WarpX::Evolve::step 3 0.0001692 0.0002975 0.0004747 0.02% FabArray::ParallelCopy() 132 0.0003286 0.000399 0.0004666 0.02% ablastr::utils::communication::ParallelCopy 132 0.0003397 0.0004091 0.0004542 0.02% ablastr::utils::communication::FillBoundary 132 0.0002132 0.0002373 0.0002675 0.01% MultiFab::Copy() 66 0.0001997 0.0002223 0.0002458 0.01% FlushFormatPlotfile::WriteToFile() 1 1.245e-05 7.189e-05 0.0002434 0.01% FabArray::FillBoundary() 114 0.0001221 0.0001354 0.0001492 0.01% Diagnostics::FilterComputePackFlush() 4 5.561e-05 6.114e-05 6.806e-05 0.00% ablastr::utils::communication::OverrideSync 18 1.891e-05 2.364e-05 3.261e-05 0.00% FAbArray::OverrideSync() 18 1.883e-05 2.048e-05 2.367e-05 0.00% OverrideSync_finish() 18 1.235e-05 1.374e-05 1.48e-05 0.00% WarpX::Evolve() 1 2.576e-06 2.977e-06 3.401e-06 0.00% REG::WarpX::Evolve() 1 2.562e-06 2.816e-06 3.249e-06 0.00% Other 368 0.0009001 0.001051 0.00128 0.05% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- REG::WarpX::Evolve() 1 2.259 2.259 2.26 89.15% WarpX::Evolve() 1 2.259 2.259 2.26 89.15% WarpX::Evolve::step 3 2.135 2.136 2.136 84.27% WarpX::OneStep_nosub() 3 1.867 1.867 1.868 73.68% PML::Exchange 66 0.69 0.721 0.758 29.90% WarpX::MacroscopicEvolveE() 3 0.2858 0.3114 0.3378 13.33% amrex::Copy() 132 0.2297 0.2358 0.2456 9.69% FabArray::setVal() 132 0.2303 0.2315 0.2327 9.18% ablastr::utils::communication::ParallelCopy 132 0.09442 0.1415 0.1845 7.28% FabArray::ParallelCopy() 132 0.09408 0.141 0.1841 7.26% MultiFab::Copy() 66 0.1139 0.1186 0.1254 4.95% Diagnostics::FilterComputePackFlush() 4 0.1232 0.1238 0.1242 4.90% FabArray::LinComb() 66 0.07235 0.09175 0.1121 4.42% WarpX::EvolveB() 6 0.07725 0.0932 0.1011 3.99% FabArray::ParallelCopy_finish() 132 0.007717 0.05302 0.09821 3.87% FabArray::ParallelCopy_nowait() 132 0.08543 0.08763 0.0915 3.61% FillBoundary_finish() 132 0.01464 0.02399 0.04945 1.95% sample::Coarsen() 6 0.0379 0.03808 0.0385 1.52% ablastr::utils::communication::OverrideSync 18 0.003711 0.01581 0.03787 1.49% FAbArray::OverrideSync() 18 0.00369 0.01578 0.03784 1.49% OverrideSync_finish() 18 0.003058 0.01506 0.03702 1.46% ablastr::utils::communication::FillBoundary 132 0.02721 0.02767 0.02819 1.11% FabArray::FillBoundary() 114 0.02385 0.02469 0.02552 1.01% FillBoundary_nowait() 132 0.01519 0.019 0.02327 0.92% FlushFormatPlotfile::WriteToFile() 1 0.01812 0.01867 0.01931 0.76% WriteMultiLevelPlotfile() 1 0.0181 0.0186 0.01907 0.75% VisMF::Write(FabArray) 1 0.0176 0.01813 0.01848 0.73% WarpX::DampPML() 3 0.009913 0.01503 0.01821 0.72% Other 368 0.005911 0.007311 0.008563 0.34% -------------------------------------------------------------------------------------------- END REGION WarpX::Evolve() Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [roger_pec_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.TP(nvals = 1) :: [5.4545e-10] [TOP]::my_constants.dx(nvals = 3) :: [Lx, /, nx] [TOP]::my_constants.dy(nvals = 3) :: [Ly, /, ny] [TOP]::my_constants.dz(nvals = 3) :: [Lz, /, nz] [TOP]::my_constants.eps_r_nb(nvals = 1) :: [13.] [TOP]::my_constants.flag_none(nvals = 1) :: [0] [TOP]::my_constants.flag_ss(nvals = 1) :: [2] [TOP]::my_constants.mu_r_nb(nvals = 1) :: [1.0] [TOP]::my_constants.sigma_nb(nvals = 1) :: [1.e7] [TOP]::plt(nvals = 1) :: [roger_pec_plt] Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 4 6 B 7 B 9 B 8192 KiB 8192 KiB 8192 KiB main() 280 3304 B 3307 B 3310 B 3584 B 3584 B 3584 B WarpX::OneStep_nosub() 24 2212 B 2214 B 2216 B 2560 B 2560 B 2560 B WarpX::InitData() 12 735 B 737 B 741 B 768 B 768 B 768 B Unprofiled 88 0 B 0 B 0 B 256 B 256 B 256 B -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------- WarpX::InitData() 286 151 MiB 167 MiB 182 MiB 155 MiB 171 MiB 187 MiB PML::Exchange 1296 3240 KiB 3309 KiB 3404 KiB 10 MiB 10 MiB 11 MiB FillBoundary_nowait() 1074 3329 B 4235 B 4727 B 391 KiB 394 KiB 395 KiB FabArray::ParallelCopy_nowait() 1152 3064 B 3335 B 3555 B 86 KiB 104 KiB 122 KiB --------------------------------------------------------------------------------------------------------------- AMReX (26.06-8-g5bee7705813e) finalized