Initializing AMReX (26.06-15-g07311ca5127b)... MPI initialized with 4 MPI processes MPI initialized with thread support level 3 AMReX (26.06-15-g07311ca5127b) initialized London class is constructed WarpX (79466d33388f) _____ __ .__ / _ \________/ |_ ____ _____ |__| ______ / /_\ \_ __ \ __\/ __ \ / \| |/ ___/ / | \ | \/| | \ ___/| Y Y \ |\___ \ \____|__ /__| |__| \___ >__|_| /__/____ > \/ \/ \/ \/ Level 0: dt = 4.333124703e-18 ; dx = 1e-08 ; dy = 1e-08 ; dz = 1e-08 --- INFO : we are in init data of macro calling london Grids Summary: Level 0 8 grids 2097152 cells 100 % of domain smallest grid: 64 x 64 x 64 biggest grid: 64 x 64 x 64 ------------------------------------------------------------------------------- --------------------------- MAIN EM PIC PARAMETERS ---------------------------- ------------------------------------------------------------------------------- Precision: | DOUBLE Particle precision: | DOUBLE Geometry: | 3D (XYZ) Operation mode: | Electromagnetic | - macroscopic | - Lax-Wendroff algorithm ------------------------------------------------------------------------------- Current Deposition: | Esirkepov Particle Pusher: | Boris Charge Deposition: | standard Field Gathering: | energy-conserving Particle Shape Factor:| 0 ------------------------------------------------------------------------------- Maxwell Solver: | Yee ------------------------------------------------------------------------------- For full input parameters, see the file: warpx_used_inputs --- INFO : Writing plotfile diags/plt000000 STEP 1 starts ... evolve london J using E in evolve london j evolve london J using E Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [london_Rittweger_3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.dx(nvals = 3) :: [(prob_hi-prob_lo), /, nx] [TOP]::my_constants.dy(nvals = 3) :: [(prob_hi-prob_lo), /, ny] [TOP]::my_constants.obs(nvals = 1) :: [-400.e-9] [TOP]::plt(nvals = 1) :: [london_Rittweger_3d_plt] **** WARNINGS ****************************************************************** * GLOBAL warning list after [ FIRST STEP ] * * --> [! ] [Species] [raised 4 times] * particles.nspecies is ignored. Just use particles.species_names please. * @ Raised by: ALL * ******************************************************************************** STEP 1 ends. TIME = 4.333124703e-18 DT = 4.333124703e-18 Evolve time = 0.353571616 s; This step = 0.353571616 s; Avg. per step = 0.353571616 s STEP 2 starts ... in evolve london j evolve london J using E STEP 2 ends. TIME = 8.666249407e-18 DT = 4.333124703e-18 Evolve time = 0.683227712 s; This step = 0.329656096 s; Avg. per step = 0.341613856 s STEP 3 starts ... in evolve london j evolve london J using E STEP 3 ends. TIME = 1.299937411e-17 DT = 4.333124703e-18 Evolve time = 1.009839539 s; This step = 0.326611827 s; Avg. per step = 0.3366131797 s STEP 4 starts ... in evolve london j evolve london J using E STEP 4 ends. TIME = 1.733249881e-17 DT = 4.333124703e-18 Evolve time = 1.338819664 s; This step = 0.328980125 s; Avg. per step = 0.334704916 s STEP 5 starts ... in evolve london j evolve london J using E --- INFO : Writing plotfile diags/plt000005 STEP 5 ends. TIME = 2.166562352e-17 DT = 4.333124703e-18 Evolve time = 1.846161437 s; This step = 0.507341773 s; Avg. per step = 0.3692322874 s Total Time : 2.269724886 TinyProfiler total time across processes [min...avg...max]: 2.273 ... 2.276 ... 2.279 -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- FabArray::setVal() 291 0.55 0.5831 0.6157 27.01% amrex::Copy() 282 0.4304 0.4376 0.4433 19.45% WarpX::MacroscopicEvolveE() 5 0.3826 0.3844 0.3896 17.09% WarpX::InitData() 1 0.123 0.1283 0.1329 5.83% PML::Exchange 132 0.1199 0.1256 0.13 5.71% sample::Coarsen() 18 0.1182 0.1194 0.1209 5.30% FabArray::ParallelCopy_finish() 264 0.04135 0.0761 0.1135 4.98% WarpX::EvolveB() 10 0.086 0.08703 0.08863 3.89% FillBoundary_nowait() 264 0.08309 0.08421 0.08503 3.73% FabArray::LinComb() 114 0.04782 0.05027 0.05271 2.31% FillBoundary_finish() 264 0.0284 0.03613 0.04146 1.82% VisMF::Write(FabArray) 2 0.03419 0.03513 0.03609 1.58% FabArray::ParallelCopy_nowait() 264 0.02922 0.03153 0.03346 1.47% WarpX::EvolveBLondon() 5 0.03078 0.03136 0.03249 1.43% WarpX::OneStep_nosub() 5 0.02176 0.02193 0.02222 0.98% WarpX::DampPML() 5 0.01281 0.01291 0.01303 0.57% WarpX::Evolve::step 5 0.004499 0.006109 0.007783 0.34% DistributionMapping::LeastUsedCPUs() 1 1.737e-05 0.002712 0.005402 0.24% main() 1 0.0005195 0.002577 0.003666 0.16% WriteMultiLevelPlotfile() 2 0.0007448 0.001199 0.001736 0.08% ablastr::utils::communication::ParallelCopy 264 0.0007271 0.0008414 0.0009569 0.04% FabArray::ParallelCopy() 264 0.0007619 0.0007886 0.0008193 0.04% FlushFormatPlotfile::WriteToFile() 2 3.375e-05 0.0001842 0.0006186 0.03% ablastr::utils::communication::FillBoundary 264 0.0004793 0.0005017 0.000519 0.02% MultiFab::Copy() 132 0.000426 0.0004654 0.0005013 0.02% FabArray::FillBoundary() 234 0.0003268 0.0003367 0.0003464 0.02% Diagnostics::FilterComputePackFlush() 7 0.0001458 0.0001644 0.0001889 0.01% FabArray::FillBoundaryAndSync() 30 4.769e-05 5.83e-05 6.677e-05 0.00% FillBoundaryAndSync_finish() 30 5.663e-05 5.986e-05 6.325e-05 0.00% FillBoundaryAndSync_nowait() 30 3.082e-05 3.503e-05 3.879e-05 0.00% ParticleContainer::Redistribute_impl() 1 9.157e-06 1.216e-05 1.433e-05 0.00% ParticleCopyPlan::build 1 3.104e-06 6.829e-06 1.379e-05 0.00% ParticleCopyPlan::buildMPIStart 1 7.172e-06 8.989e-06 1.165e-05 0.00% AmrMesh::MakeDistributionMap() 1 1.647e-06 3.004e-06 6.423e-06 0.00% WarpX::Evolve() 1 3.458e-06 3.832e-06 4.251e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.014e-06 3.651e-06 4.182e-06 0.00% REG::WarpX::Evolve() 1 1.798e-06 2.769e-06 3.45e-06 0.00% Other 737 0.003258 0.005937 0.008201 0.36% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- main() 1 2.265 2.267 2.27 99.59% REG::WarpX::Evolve() 1 1.95 1.952 1.954 85.74% WarpX::Evolve() 1 1.95 1.952 1.954 85.74% WarpX::Evolve::step 5 1.846 1.847 1.847 81.05% WarpX::OneStep_nosub() 5 1.28 1.282 1.285 56.38% PML::Exchange 132 1.255 1.263 1.266 55.56% FabArray::setVal() 291 0.55 0.5831 0.6157 27.01% amrex::Copy() 282 0.4304 0.4376 0.4433 19.45% WarpX::MacroscopicEvolveE() 5 0.3826 0.3844 0.3896 17.09% Diagnostics::FilterComputePackFlush() 7 0.3541 0.359 0.3658 16.05% WarpX::InitData() 1 0.3098 0.3124 0.3149 13.82% MultiFab::Copy() 132 0.2157 0.2211 0.2257 9.90% ablastr::utils::communication::ParallelCopy 264 0.07385 0.111 0.1473 6.46% FabArray::ParallelCopy() 264 0.07312 0.1102 0.1465 6.43% ablastr::utils::communication::FillBoundary 264 0.1119 0.1199 0.1259 5.52% sample::Coarsen() 18 0.1182 0.1194 0.1209 5.30% FabArray::ParallelCopy_finish() 264 0.04135 0.0761 0.1135 4.98% FabArray::FillBoundary() 234 0.08935 0.09189 0.09643 4.23% WarpX::EvolveB() 10 0.086 0.08703 0.08863 3.89% FillBoundary_nowait() 264 0.08446 0.08554 0.08633 3.79% FabArray::LinComb() 114 0.04782 0.05027 0.05271 2.31% FillBoundary_finish() 264 0.0284 0.03613 0.04146 1.82% FlushFormatPlotfile::WriteToFile() 2 0.03597 0.03656 0.03783 1.66% WriteMultiLevelPlotfile() 2 0.03593 0.03638 0.03721 1.63% VisMF::Write(FabArray) 2 0.03419 0.03513 0.03609 1.58% FabArray::ParallelCopy_nowait() 264 0.03095 0.0333 0.03529 1.55% FabArray::FillBoundaryAndSync() 30 0.02205 0.02755 0.03315 1.45% WarpX::EvolveBLondon() 5 0.03078 0.03136 0.03249 1.43% FillBoundaryAndSync_nowait() 30 0.01794 0.01837 0.0188 0.82% FillBoundaryAndSync_finish() 30 0.003759 0.009116 0.01459 0.64% WarpX::DampPML() 5 0.01281 0.01291 0.01303 0.57% AmrMesh::MakeDistributionMap() 1 2.429e-05 0.00272 0.00541 0.24% DistributionMapping::SFCProcessorMapDoIt() 1 2.256e-05 0.002717 0.005408 0.24% DistributionMapping::LeastUsedCPUs() 1 1.737e-05 0.002712 0.005402 0.24% ParticleContainer::Redistribute_impl() 1 0.0001945 0.002635 0.004536 0.20% ParticleCopyPlan::build 1 3.08e-05 0.002475 0.004383 0.19% ParticleCopyPlan::buildMPIStart 1 2.722e-05 0.002467 0.004368 0.19% Other 737 0.01085 0.0156 0.02005 0.88% -------------------------------------------------------------------------------------------- BEGIN REGION WarpX::Evolve() -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- FabArray::setVal() 252 0.4801 0.5099 0.5389 23.64% amrex::Copy() 270 0.412 0.4198 0.4261 18.69% WarpX::MacroscopicEvolveE() 5 0.3826 0.3844 0.3896 17.09% PML::Exchange 126 0.1157 0.1213 0.1258 5.52% FabArray::ParallelCopy_finish() 252 0.03569 0.07067 0.1111 4.87% WarpX::EvolveB() 10 0.086 0.08703 0.08863 3.89% FillBoundary_nowait() 252 0.07906 0.08 0.081 3.55% sample::Coarsen() 12 0.0699 0.07113 0.0728 3.19% FabArray::LinComb() 108 0.04487 0.04732 0.05005 2.20% FillBoundary_finish() 252 0.0253 0.03416 0.04088 1.79% WarpX::EvolveBLondon() 5 0.03078 0.03136 0.03249 1.43% FabArray::ParallelCopy_nowait() 252 0.02784 0.03022 0.03227 1.42% WarpX::OneStep_nosub() 5 0.02176 0.02193 0.02222 0.98% VisMF::Write(FabArray) 1 0.01741 0.01768 0.01804 0.79% WarpX::DampPML() 5 0.01281 0.01291 0.01303 0.57% WarpX::Evolve::step 5 0.004499 0.006109 0.007783 0.34% ablastr::utils::communication::ParallelCopy 252 0.000702 0.0008181 0.0009329 0.04% FabArray::ParallelCopy() 252 0.0007377 0.000764 0.0007917 0.03% WriteMultiLevelPlotfile() 1 0.0002111 0.0004783 0.0007317 0.03% ablastr::utils::communication::FillBoundary 252 0.0004595 0.000483 0.0005024 0.02% MultiFab::Copy() 126 0.0004122 0.0004522 0.0004891 0.02% FabArray::FillBoundary() 222 0.0003134 0.0003228 0.0003325 0.01% FlushFormatPlotfile::WriteToFile() 1 1.364e-05 7.762e-05 0.0002638 0.01% Diagnostics::FilterComputePackFlush() 6 9.923e-05 0.0001028 0.0001087 0.00% FabArray::FillBoundaryAndSync() 30 4.769e-05 5.83e-05 6.677e-05 0.00% FillBoundaryAndSync_finish() 30 5.663e-05 5.986e-05 6.325e-05 0.00% FillBoundaryAndSync_nowait() 30 3.082e-05 3.503e-05 3.879e-05 0.00% WarpX::Evolve() 1 3.458e-06 3.832e-06 4.251e-06 0.00% REG::WarpX::Evolve() 1 1.798e-06 2.769e-06 3.45e-06 0.00% Other 670 0.002398 0.002568 0.002785 0.12% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- REG::WarpX::Evolve() 1 1.95 1.952 1.954 85.74% WarpX::Evolve() 1 1.95 1.952 1.954 85.74% WarpX::Evolve::step 5 1.846 1.847 1.847 81.05% WarpX::OneStep_nosub() 5 1.28 1.282 1.285 56.38% PML::Exchange 126 1.198 1.203 1.209 53.05% FabArray::setVal() 252 0.4801 0.5099 0.5389 23.64% amrex::Copy() 270 0.412 0.4198 0.4261 18.69% WarpX::MacroscopicEvolveE() 5 0.3826 0.3844 0.3896 17.09% Diagnostics::FilterComputePackFlush() 6 0.2245 0.2257 0.2277 9.99% MultiFab::Copy() 126 0.2055 0.2118 0.2171 9.53% ablastr::utils::communication::ParallelCopy 252 0.06632 0.1038 0.1429 6.27% FabArray::ParallelCopy() 252 0.06562 0.103 0.1421 6.23% ablastr::utils::communication::FillBoundary 252 0.1037 0.1134 0.1209 5.31% FabArray::ParallelCopy_finish() 252 0.03569 0.07067 0.1111 4.87% WarpX::EvolveB() 10 0.086 0.08703 0.08863 3.89% FabArray::FillBoundary() 222 0.08116 0.08538 0.08852 3.88% FillBoundary_nowait() 252 0.08009 0.081 0.08197 3.60% sample::Coarsen() 12 0.0699 0.07113 0.0728 3.19% FabArray::LinComb() 108 0.04487 0.04732 0.05005 2.20% FillBoundary_finish() 252 0.0253 0.03416 0.04088 1.79% FabArray::ParallelCopy_nowait() 252 0.02914 0.03159 0.03373 1.48% FabArray::FillBoundaryAndSync() 30 0.02205 0.02755 0.03315 1.45% WarpX::EvolveBLondon() 5 0.03078 0.03136 0.03249 1.43% FlushFormatPlotfile::WriteToFile() 1 0.01781 0.01826 0.01881 0.83% FillBoundaryAndSync_nowait() 30 0.01794 0.01837 0.0188 0.82% WriteMultiLevelPlotfile() 1 0.0178 0.01818 0.01855 0.81% VisMF::Write(FabArray) 1 0.01741 0.01768 0.01804 0.79% FillBoundaryAndSync_finish() 30 0.003759 0.009116 0.01459 0.64% WarpX::DampPML() 5 0.01281 0.01291 0.01303 0.57% Other 670 0.009327 0.01154 0.01394 0.61% -------------------------------------------------------------------------------------------- END REGION WarpX::Evolve() Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [london_Rittweger_3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.dx(nvals = 3) :: [(prob_hi-prob_lo), /, nx] [TOP]::my_constants.dy(nvals = 3) :: [(prob_hi-prob_lo), /, ny] [TOP]::my_constants.obs(nvals = 1) :: [-400.e-9] [TOP]::plt(nvals = 1) :: [london_Rittweger_3d_plt] Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 4 5 B 8 B 10 B 8192 KiB 8192 KiB 8192 KiB main() 184 3302 B 3305 B 3309 B 3584 B 3584 B 3584 B WarpX::InitData() 52 2463 B 2463 B 2464 B 2560 B 2560 B 2560 B Unprofiled 76 0 B 0 B 0 B 256 B 256 B 256 B -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------- WarpX::InitData() 280 130 MiB 130 MiB 130 MiB 135 MiB 135 MiB 135 MiB PML::Exchange 2112 4913 KiB 4943 KiB 4988 KiB 9974 KiB 9974 KiB 9974 KiB FillBoundary_nowait() 1932 17 KiB 19 KiB 20 KiB 601 KiB 606 KiB 613 KiB FabArray::ParallelCopy_nowait() 2112 842 B 1073 B 1256 B 76 KiB 76 KiB 76 KiB --------------------------------------------------------------------------------------------------------------- AMReX (26.06-15-g07311ca5127b) finalized