Initializing AMReX (26.06-16-gc5d27c8ff1b7)... MPI initialized with 4 MPI processes MPI initialized with thread support level 3 AMReX (26.06-16-gc5d27c8ff1b7) initialized London class is constructed WarpX (79466d33388f) _____ __ .__ / _ \________/ |_ ____ _____ |__| ______ / /_\ \_ __ \ __\/ __ \ / \| |/ ___/ / | \ | \/| | \ ___/| Y Y \ |\___ \ \____|__ /__| |__| \___ >__|_| /__/____ > \/ \/ \/ \/ Level 0: dt = 4.333124703e-18 ; dx = 1e-08 ; dy = 1e-08 ; dz = 1e-08 --- INFO : we are in init data of macro calling london Grids Summary: Level 0 8 grids 2097152 cells 100 % of domain smallest grid: 64 x 64 x 64 biggest grid: 64 x 64 x 64 ------------------------------------------------------------------------------- --------------------------- MAIN EM PIC PARAMETERS ---------------------------- ------------------------------------------------------------------------------- Precision: | DOUBLE Particle precision: | DOUBLE Geometry: | 3D (XYZ) Operation mode: | Electromagnetic | - macroscopic | - Lax-Wendroff algorithm ------------------------------------------------------------------------------- Current Deposition: | Esirkepov Particle Pusher: | Boris Charge Deposition: | standard Field Gathering: | energy-conserving Particle Shape Factor:| 0 ------------------------------------------------------------------------------- Maxwell Solver: | Yee ------------------------------------------------------------------------------- For full input parameters, see the file: warpx_used_inputs --- INFO : Writing plotfile diags/plt000000 STEP 1 starts ... evolve london J using E in evolve london j evolve london J using E Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [london_Rittweger_3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.dx(nvals = 3) :: [(prob_hi-prob_lo), /, nx] [TOP]::my_constants.dy(nvals = 3) :: [(prob_hi-prob_lo), /, ny] [TOP]::my_constants.obs(nvals = 1) :: [-400.e-9] [TOP]::plt(nvals = 1) :: [london_Rittweger_3d_plt] **** WARNINGS ****************************************************************** * GLOBAL warning list after [ FIRST STEP ] * * --> [! ] [Species] [raised 4 times] * particles.nspecies is ignored. Just use particles.species_names please. * @ Raised by: ALL * ******************************************************************************** STEP 1 ends. TIME = 4.333124703e-18 DT = 4.333124703e-18 Evolve time = 0.35818249 s; This step = 0.35818249 s; Avg. per step = 0.35818249 s STEP 2 starts ... in evolve london j evolve london J using E STEP 2 ends. TIME = 8.666249407e-18 DT = 4.333124703e-18 Evolve time = 0.687568388 s; This step = 0.329385898 s; Avg. per step = 0.343784194 s STEP 3 starts ... in evolve london j evolve london J using E STEP 3 ends. TIME = 1.299937411e-17 DT = 4.333124703e-18 Evolve time = 1.013916679 s; This step = 0.326348291 s; Avg. per step = 0.3379722263 s STEP 4 starts ... in evolve london j evolve london J using E STEP 4 ends. TIME = 1.733249881e-17 DT = 4.333124703e-18 Evolve time = 1.336873004 s; This step = 0.322956325 s; Avg. per step = 0.334218251 s STEP 5 starts ... in evolve london j evolve london J using E --- INFO : Writing plotfile diags/plt000005 STEP 5 ends. TIME = 2.166562352e-17 DT = 4.333124703e-18 Evolve time = 1.854208577 s; This step = 0.517335573 s; Avg. per step = 0.3708417154 s Total Time : 2.268056986 TinyProfiler total time across processes [min...avg...max]: 2.275 ... 2.275 ... 2.276 -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- FabArray::setVal() 291 0.5077 0.5867 0.6314 27.74% amrex::Copy() 282 0.4289 0.4312 0.4346 19.10% WarpX::MacroscopicEvolveE() 5 0.3806 0.3827 0.388 17.05% FabArray::ParallelCopy_finish() 264 0.02882 0.08132 0.1782 7.83% PML::Exchange 132 0.1165 0.1289 0.1385 6.08% WarpX::InitData() 1 0.1228 0.1283 0.1329 5.84% sample::Coarsen() 18 0.1172 0.118 0.1193 5.24% WarpX::EvolveB() 10 0.08576 0.08706 0.09031 3.97% FillBoundary_nowait() 264 0.07919 0.08115 0.08415 3.70% FabArray::LinComb() 114 0.04946 0.04977 0.05024 2.21% FillBoundary_finish() 264 0.03847 0.04279 0.04631 2.03% VisMF::Write(FabArray) 2 0.034 0.0346 0.03545 1.56% FabArray::ParallelCopy_nowait() 264 0.02997 0.03129 0.0328 1.44% WarpX::EvolveBLondon() 5 0.03003 0.031 0.03255 1.43% WarpX::OneStep_nosub() 5 0.02136 0.02168 0.02241 0.98% WarpX::DampPML() 5 0.01246 0.0127 0.0128 0.56% WarpX::Evolve::step 5 0.004458 0.006419 0.01028 0.45% WriteMultiLevelPlotfile() 2 3.729e-05 0.001618 0.002689 0.12% main() 1 0.0005919 0.001043 0.001502 0.07% FabArray::ParallelCopy() 264 0.0007055 0.0007779 0.0008552 0.04% ablastr::utils::communication::ParallelCopy 264 0.0007291 0.0008002 0.0008511 0.04% FlushFormatPlotfile::WriteToFile() 2 3.824e-05 0.0002228 0.0007629 0.03% MultiFab::Copy() 132 0.000462 0.0005097 0.0006307 0.03% ablastr::utils::communication::FillBoundary 264 0.0004407 0.000496 0.0005388 0.02% FabArray::FillBoundary() 234 0.0003177 0.0003389 0.000351 0.02% Diagnostics::FilterComputePackFlush() 7 0.0001436 0.0001579 0.0001712 0.01% FillBoundaryAndSync_finish() 30 4.789e-05 5.614e-05 6.43e-05 0.00% FabArray::FillBoundaryAndSync() 30 4.536e-05 5.355e-05 6.174e-05 0.00% FillBoundaryAndSync_nowait() 30 2.756e-05 3.598e-05 4.476e-05 0.00% ablastr::utils::communication::OverrideSync 30 3.129e-05 3.73e-05 4.167e-05 0.00% FAbArray::OverrideSync() 30 2.818e-05 3.278e-05 3.712e-05 0.00% ParticleContainer::Redistribute_impl() 1 8.384e-06 1.156e-05 1.422e-05 0.00% WarpX::Evolve() 1 3.719e-06 4.074e-06 4.522e-06 0.00% REG::WarpX::Evolve() 1 2.377e-06 2.768e-06 3.074e-06 0.00% Other 682 0.003215 0.005176 0.008224 0.36% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- main() 1 2.266 2.267 2.268 99.64% REG::WarpX::Evolve() 1 1.956 1.957 1.957 85.97% WarpX::Evolve() 1 1.956 1.957 1.957 85.97% WarpX::Evolve::step 5 1.854 1.854 1.855 81.48% WarpX::OneStep_nosub() 5 1.283 1.288 1.293 56.81% PML::Exchange 132 1.257 1.268 1.275 56.03% FabArray::setVal() 291 0.5077 0.5867 0.6314 27.74% amrex::Copy() 282 0.4289 0.4312 0.4346 19.10% WarpX::MacroscopicEvolveE() 5 0.3806 0.3827 0.388 17.05% Diagnostics::FilterComputePackFlush() 7 0.3526 0.3568 0.3614 15.88% WarpX::InitData() 1 0.3082 0.3094 0.3102 13.63% MultiFab::Copy() 132 0.2142 0.2205 0.2269 9.97% ablastr::utils::communication::ParallelCopy 264 0.06188 0.1159 0.2122 9.32% FabArray::ParallelCopy() 264 0.06115 0.1151 0.2114 9.29% FabArray::ParallelCopy_finish() 264 0.02882 0.08132 0.1782 7.83% ablastr::utils::communication::FillBoundary 264 0.1191 0.1239 0.1308 5.75% sample::Coarsen() 18 0.1172 0.118 0.1193 5.24% FabArray::FillBoundary() 234 0.09246 0.0971 0.1003 4.40% WarpX::EvolveB() 10 0.08576 0.08706 0.09031 3.97% FillBoundary_nowait() 264 0.08048 0.08254 0.08572 3.77% FabArray::LinComb() 114 0.04946 0.04977 0.05024 2.21% FillBoundary_finish() 264 0.03847 0.04279 0.04631 2.03% FlushFormatPlotfile::WriteToFile() 2 0.03486 0.03649 0.03778 1.66% WriteMultiLevelPlotfile() 2 0.03482 0.03627 0.03702 1.63% VisMF::Write(FabArray) 2 0.034 0.0346 0.03545 1.56% FabArray::ParallelCopy_nowait() 264 0.03163 0.03304 0.03462 1.52% FabArray::FillBoundaryAndSync() 30 0.01937 0.02629 0.03354 1.47% WarpX::EvolveBLondon() 5 0.03003 0.031 0.03255 1.43% FillBoundaryAndSync_nowait() 30 0.01708 0.01787 0.01904 0.84% FillBoundaryAndSync_finish() 30 0.001938 0.008362 0.01453 0.64% WarpX::DampPML() 5 0.01246 0.0127 0.0128 0.56% ablastr::utils::communication::OverrideSync 30 0.001934 0.002539 0.003389 0.15% FAbArray::OverrideSync() 30 0.001903 0.002502 0.003348 0.15% ParticleContainer::Redistribute_impl() 1 0.000177 0.0009074 0.002473 0.11% Other 682 0.006477 0.01252 0.02196 0.96% -------------------------------------------------------------------------------------------- BEGIN REGION WarpX::Evolve() -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- FabArray::setVal() 252 0.4341 0.5147 0.5603 24.62% amrex::Copy() 270 0.4099 0.412 0.4157 18.26% WarpX::MacroscopicEvolveE() 5 0.3806 0.3827 0.388 17.05% FabArray::ParallelCopy_finish() 252 0.01795 0.07564 0.1768 7.77% PML::Exchange 126 0.1114 0.1241 0.1332 5.85% WarpX::EvolveB() 10 0.08576 0.08706 0.09031 3.97% FillBoundary_nowait() 252 0.07515 0.077 0.08001 3.52% sample::Coarsen() 12 0.06978 0.07031 0.07105 3.12% FabArray::LinComb() 108 0.0464 0.04682 0.04744 2.08% FillBoundary_finish() 252 0.03786 0.04058 0.04257 1.87% WarpX::EvolveBLondon() 5 0.03003 0.031 0.03255 1.43% FabArray::ParallelCopy_nowait() 252 0.02864 0.02982 0.03126 1.37% WarpX::OneStep_nosub() 5 0.02136 0.02168 0.02241 0.98% VisMF::Write(FabArray) 1 0.01729 0.01757 0.01794 0.79% WarpX::DampPML() 5 0.01246 0.0127 0.0128 0.56% WarpX::Evolve::step 5 0.004458 0.006419 0.01028 0.45% WriteMultiLevelPlotfile() 1 1.644e-05 0.0007748 0.001237 0.05% ablastr::utils::communication::ParallelCopy 252 0.0007089 0.0007763 0.0008289 0.04% FabArray::ParallelCopy() 252 0.0006842 0.0007514 0.0008246 0.04% MultiFab::Copy() 126 0.0004476 0.0004956 0.0006145 0.03% ablastr::utils::communication::FillBoundary 252 0.0004229 0.0004754 0.000517 0.02% FlushFormatPlotfile::WriteToFile() 1 1.334e-05 9.628e-05 0.0003394 0.01% FabArray::FillBoundary() 222 0.0003036 0.0003236 0.0003355 0.01% Diagnostics::FilterComputePackFlush() 6 9.719e-05 0.0001042 0.0001118 0.00% FillBoundaryAndSync_finish() 30 4.789e-05 5.614e-05 6.43e-05 0.00% FabArray::FillBoundaryAndSync() 30 4.536e-05 5.355e-05 6.174e-05 0.00% FillBoundaryAndSync_nowait() 30 2.756e-05 3.598e-05 4.476e-05 0.00% WarpX::Evolve() 1 3.719e-06 4.074e-06 4.522e-06 0.00% REG::WarpX::Evolve() 1 2.377e-06 2.768e-06 3.074e-06 0.00% Other 670 0.002371 0.002577 0.002918 0.13% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- REG::WarpX::Evolve() 1 1.956 1.957 1.957 85.97% WarpX::Evolve() 1 1.956 1.957 1.957 85.97% WarpX::Evolve::step 5 1.854 1.854 1.855 81.48% WarpX::OneStep_nosub() 5 1.283 1.288 1.293 56.81% PML::Exchange 126 1.201 1.206 1.212 53.23% FabArray::setVal() 252 0.4341 0.5147 0.5603 24.62% amrex::Copy() 270 0.4099 0.412 0.4157 18.26% WarpX::MacroscopicEvolveE() 5 0.3806 0.3827 0.388 17.05% Diagnostics::FilterComputePackFlush() 6 0.2225 0.2229 0.2232 9.81% MultiFab::Copy() 126 0.2041 0.2109 0.2178 9.57% ablastr::utils::communication::ParallelCopy 252 0.04926 0.1083 0.209 9.18% FabArray::ParallelCopy() 252 0.04855 0.1075 0.2082 9.15% FabArray::ParallelCopy_finish() 252 0.01795 0.07564 0.1768 7.77% ablastr::utils::communication::FillBoundary 252 0.1138 0.1172 0.1226 5.39% FabArray::FillBoundary() 222 0.08425 0.09039 0.09511 4.18% WarpX::EvolveB() 10 0.08576 0.08706 0.09031 3.97% FillBoundary_nowait() 252 0.0761 0.07805 0.08125 3.57% sample::Coarsen() 12 0.06978 0.07031 0.07105 3.12% FabArray::LinComb() 108 0.0464 0.04682 0.04744 2.08% FillBoundary_finish() 252 0.03786 0.04058 0.04257 1.87% FabArray::FillBoundaryAndSync() 30 0.01937 0.02629 0.03354 1.47% FabArray::ParallelCopy_nowait() 252 0.02991 0.03115 0.03262 1.43% WarpX::EvolveBLondon() 5 0.03003 0.031 0.03255 1.43% FlushFormatPlotfile::WriteToFile() 1 0.01766 0.01846 0.01913 0.84% FillBoundaryAndSync_nowait() 30 0.01708 0.01787 0.01904 0.84% WriteMultiLevelPlotfile() 1 0.01765 0.01837 0.01879 0.83% VisMF::Write(FabArray) 1 0.01729 0.01757 0.01794 0.79% FillBoundaryAndSync_finish() 30 0.001938 0.008362 0.01453 0.64% WarpX::DampPML() 5 0.01246 0.0127 0.0128 0.56% Other 670 0.00864 0.01072 0.01394 0.61% -------------------------------------------------------------------------------------------- END REGION WarpX::Evolve() Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [london_Rittweger_3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.dx(nvals = 3) :: [(prob_hi-prob_lo), /, nx] [TOP]::my_constants.dy(nvals = 3) :: [(prob_hi-prob_lo), /, ny] [TOP]::my_constants.obs(nvals = 1) :: [-400.e-9] [TOP]::plt(nvals = 1) :: [london_Rittweger_3d_plt] Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 4 6 B 8 B 11 B 8192 KiB 8192 KiB 8192 KiB main() 184 3306 B 3307 B 3309 B 3584 B 3584 B 3584 B WarpX::InitData() 52 2467 B 2468 B 2469 B 2560 B 2560 B 2560 B Unprofiled 76 0 B 0 B 0 B 256 B 256 B 256 B -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------- WarpX::InitData() 280 131 MiB 131 MiB 131 MiB 135 MiB 135 MiB 135 MiB PML::Exchange 2112 4891 KiB 4958 KiB 5058 KiB 9974 KiB 9974 KiB 9974 KiB FillBoundary_nowait() 1932 18 KiB 20 KiB 21 KiB 601 KiB 606 KiB 613 KiB FabArray::ParallelCopy_nowait() 2112 798 B 1105 B 1573 B 76 KiB 76 KiB 76 KiB --------------------------------------------------------------------------------------------------------------- AMReX (26.06-16-gc5d27c8ff1b7) finalized