Initializing AMReX (26.06-31-g3c3bbaa34cd3)... MPI initialized with 4 MPI processes MPI initialized with thread support level 3 AMReX (26.06-31-g3c3bbaa34cd3) initialized London class is constructed WarpX (79466d33388f) _____ __ .__ / _ \________/ |_ ____ _____ |__| ______ / /_\ \_ __ \ __\/ __ \ / \| |/ ___/ / | \ | \/| | \ ___/| Y Y \ |\___ \ \____|__ /__| |__| \___ >__|_| /__/____ > \/ \/ \/ \/ Level 0: dt = 4.333124703e-18 ; dx = 1e-08 ; dy = 1e-08 ; dz = 1e-08 --- INFO : we are in init data of macro calling london Grids Summary: Level 0 8 grids 2097152 cells 100 % of domain smallest grid: 64 x 64 x 64 biggest grid: 64 x 64 x 64 ------------------------------------------------------------------------------- --------------------------- MAIN EM PIC PARAMETERS ---------------------------- ------------------------------------------------------------------------------- Precision: | DOUBLE Particle precision: | DOUBLE Geometry: | 3D (XYZ) Operation mode: | Electromagnetic | - macroscopic | - Lax-Wendroff algorithm ------------------------------------------------------------------------------- Current Deposition: | Esirkepov Particle Pusher: | Boris Charge Deposition: | standard Field Gathering: | energy-conserving Particle Shape Factor:| 0 ------------------------------------------------------------------------------- Maxwell Solver: | Yee ------------------------------------------------------------------------------- For full input parameters, see the file: warpx_used_inputs --- INFO : Writing plotfile diags/plt000000 STEP 1 starts ... evolve london J using E in evolve london j evolve london J using E Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [london_Rittweger_3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.dx(nvals = 3) :: [(prob_hi-prob_lo), /, nx] [TOP]::my_constants.dy(nvals = 3) :: [(prob_hi-prob_lo), /, ny] [TOP]::my_constants.obs(nvals = 1) :: [-400.e-9] [TOP]::plt(nvals = 1) :: [london_Rittweger_3d_plt] **** WARNINGS ****************************************************************** * GLOBAL warning list after [ FIRST STEP ] * * --> [! ] [Species] [raised 4 times] * particles.nspecies is ignored. Just use particles.species_names please. * @ Raised by: ALL * ******************************************************************************** STEP 1 ends. TIME = 4.333124703e-18 DT = 4.333124703e-18 Evolve time = 0.357478077 s; This step = 0.357478077 s; Avg. per step = 0.357478077 s STEP 2 starts ... in evolve london j evolve london J using E STEP 2 ends. TIME = 8.666249407e-18 DT = 4.333124703e-18 Evolve time = 0.688440723 s; This step = 0.330962646 s; Avg. per step = 0.3442203615 s STEP 3 starts ... in evolve london j evolve london J using E STEP 3 ends. TIME = 1.299937411e-17 DT = 4.333124703e-18 Evolve time = 1.025568884 s; This step = 0.337128161 s; Avg. per step = 0.3418562947 s STEP 4 starts ... in evolve london j evolve london J using E STEP 4 ends. TIME = 1.733249881e-17 DT = 4.333124703e-18 Evolve time = 1.353054246 s; This step = 0.327485362 s; Avg. per step = 0.3382635615 s STEP 5 starts ... in evolve london j evolve london J using E --- INFO : Writing plotfile diags/plt000005 STEP 5 ends. TIME = 2.166562352e-17 DT = 4.333124703e-18 Evolve time = 1.87590512 s; This step = 0.522850874 s; Avg. per step = 0.375181024 s Total Time : 2.315982307 TinyProfiler total time across processes [min...avg...max]: 2.318 ... 2.321 ... 2.325 -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- FabArray::setVal() 291 0.6002 0.6253 0.6452 27.75% amrex::Copy() 282 0.4338 0.4394 0.4453 19.16% WarpX::MacroscopicEvolveE() 5 0.3804 0.3825 0.388 16.69% PML::Exchange 132 0.128 0.134 0.1399 6.02% WarpX::InitData() 1 0.1231 0.1289 0.1357 5.84% sample::Coarsen() 18 0.1247 0.1254 0.1267 5.45% FillBoundary_nowait() 264 0.07961 0.08405 0.08853 3.81% WarpX::EvolveB() 10 0.08505 0.08627 0.08831 3.80% FabArray::ParallelCopy_finish() 264 0.04302 0.0589 0.07287 3.13% FillBoundary_finish() 264 0.02706 0.04461 0.06322 2.72% FabArray::LinComb() 114 0.04971 0.05105 0.05252 2.26% VisMF::Write(FabArray) 2 0.03449 0.03508 0.03614 1.55% WarpX::EvolveBLondon() 5 0.02906 0.03078 0.03277 1.41% FabArray::ParallelCopy_nowait() 264 0.02726 0.03021 0.03273 1.41% WarpX::OneStep_nosub() 5 0.02157 0.02247 0.02494 1.07% WarpX::DampPML() 5 0.01296 0.01303 0.01309 0.56% WarpX::Evolve::step 5 0.004639 0.005629 0.008308 0.36% DistributionMapping::LeastUsedCPUs() 1 2.015e-05 0.003773 0.007522 0.32% main() 1 0.0006323 0.001206 0.001577 0.07% WriteMultiLevelPlotfile() 2 0.0005435 0.001103 0.001332 0.06% ablastr::utils::communication::ParallelCopy 264 0.00078 0.0008321 0.0009062 0.04% FabArray::ParallelCopy() 264 0.0007235 0.0008004 0.0009025 0.04% ablastr::utils::communication::FillBoundary 264 0.00048 0.0005129 0.000548 0.02% FlushFormatPlotfile::WriteToFile() 2 3.531e-05 0.0001635 0.000545 0.02% MultiFab::Copy() 132 0.0004454 0.0004733 0.00049 0.02% FabArray::FillBoundary() 234 0.0003332 0.000353 0.0003822 0.02% Diagnostics::FilterComputePackFlush() 7 0.0001432 0.0001523 0.0001615 0.01% FabArray::FillBoundaryAndSync() 30 4.928e-05 5.579e-05 7.282e-05 0.00% FillBoundaryAndSync_finish() 30 5.176e-05 6.233e-05 6.985e-05 0.00% FillBoundaryAndSync_nowait() 30 3.176e-05 3.538e-05 4.045e-05 0.00% ParticleContainer::Redistribute_impl() 1 1.012e-05 1.173e-05 1.437e-05 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.14e-06 6.155e-06 1.024e-05 0.00% AmrMesh::MakeDistributionMap() 1 2.212e-06 3.552e-06 6.549e-06 0.00% ParticleCopyPlan::build 1 2.935e-06 4.702e-06 5.854e-06 0.00% WarpX::Evolve() 1 2.995e-06 3.864e-06 4.771e-06 0.00% REG::WarpX::Evolve() 1 2.361e-06 2.707e-06 3.046e-06 0.00% Other 738 0.003354 0.005253 0.007852 0.34% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- main() 1 2.309 2.312 2.316 99.63% REG::WarpX::Evolve() 1 1.985 1.986 1.986 85.45% WarpX::Evolve() 1 1.985 1.986 1.986 85.45% WarpX::Evolve::step 5 1.876 1.876 1.876 80.71% PML::Exchange 132 1.272 1.294 1.314 56.54% WarpX::OneStep_nosub() 5 1.303 1.306 1.309 56.29% FabArray::setVal() 291 0.6002 0.6253 0.6452 27.75% amrex::Copy() 282 0.4338 0.4394 0.4453 19.16% WarpX::MacroscopicEvolveE() 5 0.3804 0.3825 0.388 16.69% Diagnostics::FilterComputePackFlush() 7 0.371 0.377 0.3819 16.43% WarpX::InitData() 1 0.3209 0.3251 0.3289 14.15% MultiFab::Copy() 132 0.2187 0.2228 0.2265 9.74% ablastr::utils::communication::FillBoundary 264 0.1073 0.1287 0.1519 6.53% sample::Coarsen() 18 0.1247 0.1254 0.1267 5.45% FabArray::FillBoundary() 234 0.08567 0.1025 0.1209 5.20% ablastr::utils::communication::ParallelCopy 264 0.07944 0.09259 0.108 4.65% FabArray::ParallelCopy() 264 0.07853 0.09176 0.1071 4.61% FillBoundary_nowait() 264 0.08097 0.08545 0.08989 3.87% WarpX::EvolveB() 10 0.08505 0.08627 0.08831 3.80% FabArray::ParallelCopy_finish() 264 0.04302 0.0589 0.07287 3.13% FillBoundary_finish() 264 0.02706 0.04461 0.06322 2.72% FabArray::LinComb() 114 0.04971 0.05105 0.05252 2.26% FlushFormatPlotfile::WriteToFile() 2 0.0357 0.03639 0.03811 1.64% WriteMultiLevelPlotfile() 2 0.03567 0.03623 0.03756 1.62% VisMF::Write(FabArray) 2 0.03449 0.03508 0.03614 1.55% FabArray::ParallelCopy_nowait() 264 0.02901 0.03206 0.03461 1.49% WarpX::EvolveBLondon() 5 0.02906 0.03078 0.03277 1.41% FabArray::FillBoundaryAndSync() 30 0.02104 0.02575 0.03045 1.31% FillBoundaryAndSync_nowait() 30 0.01707 0.01779 0.01841 0.79% WarpX::DampPML() 5 0.01296 0.01303 0.01309 0.56% FillBoundaryAndSync_finish() 30 0.003769 0.00791 0.01204 0.52% AmrMesh::MakeDistributionMap() 1 3.515e-05 0.003785 0.007532 0.32% DistributionMapping::SFCProcessorMapDoIt() 1 3.293e-05 0.003781 0.007529 0.32% DistributionMapping::LeastUsedCPUs() 1 2.015e-05 0.003773 0.007522 0.32% ParticleContainer::Redistribute_impl() 1 0.0001782 0.001786 0.003799 0.16% ParticleCopyPlan::build 1 2.519e-05 0.001638 0.003646 0.16% Other 738 0.01103 0.01556 0.02157 0.93% -------------------------------------------------------------------------------------------- BEGIN REGION WarpX::Evolve() -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- FabArray::setVal() 252 0.5215 0.5484 0.5666 24.37% amrex::Copy() 270 0.4177 0.4218 0.4258 18.31% WarpX::MacroscopicEvolveE() 5 0.3804 0.3825 0.388 16.69% PML::Exchange 126 0.1223 0.1276 0.1328 5.71% WarpX::EvolveB() 10 0.08505 0.08627 0.08831 3.80% FillBoundary_nowait() 252 0.07623 0.07977 0.08402 3.61% sample::Coarsen() 12 0.07511 0.07549 0.07629 3.28% FabArray::ParallelCopy_finish() 252 0.03097 0.04951 0.06798 2.92% FillBoundary_finish() 252 0.02612 0.04235 0.05962 2.56% FabArray::LinComb() 108 0.04652 0.04781 0.0489 2.10% WarpX::EvolveBLondon() 5 0.02906 0.03078 0.03277 1.41% FabArray::ParallelCopy_nowait() 252 0.02605 0.02898 0.03142 1.35% WarpX::OneStep_nosub() 5 0.02157 0.02247 0.02494 1.07% VisMF::Write(FabArray) 1 0.0171 0.01747 0.01796 0.77% WarpX::DampPML() 5 0.01296 0.01303 0.01309 0.56% WarpX::Evolve::step 5 0.004639 0.005629 0.008308 0.36% ablastr::utils::communication::ParallelCopy 252 0.0007562 0.0008087 0.0008831 0.04% FabArray::ParallelCopy() 252 0.0006935 0.000772 0.0008727 0.04% WriteMultiLevelPlotfile() 1 0.000218 0.0005222 0.0007558 0.03% ablastr::utils::communication::FillBoundary 252 0.0004625 0.0004915 0.0005255 0.02% MultiFab::Copy() 126 0.0004341 0.0004601 0.0004738 0.02% FabArray::FillBoundary() 222 0.0003207 0.0003374 0.0003672 0.02% FlushFormatPlotfile::WriteToFile() 1 1.243e-05 7.079e-05 0.0002394 0.01% Diagnostics::FilterComputePackFlush() 6 9.362e-05 9.726e-05 0.0001021 0.00% FabArray::FillBoundaryAndSync() 30 4.928e-05 5.579e-05 7.282e-05 0.00% FillBoundaryAndSync_finish() 30 5.176e-05 6.233e-05 6.985e-05 0.00% FillBoundaryAndSync_nowait() 30 3.176e-05 3.538e-05 4.045e-05 0.00% WarpX::Evolve() 1 2.995e-06 3.864e-06 4.771e-06 0.00% REG::WarpX::Evolve() 1 2.361e-06 2.707e-06 3.046e-06 0.00% Other 670 0.002316 0.002592 0.002896 0.12% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- REG::WarpX::Evolve() 1 1.985 1.986 1.986 85.45% WarpX::Evolve() 1 1.985 1.986 1.986 85.45% WarpX::Evolve::step 5 1.876 1.876 1.876 80.71% WarpX::OneStep_nosub() 5 1.303 1.306 1.309 56.29% PML::Exchange 126 1.211 1.227 1.241 53.39% FabArray::setVal() 252 0.5215 0.5484 0.5666 24.37% amrex::Copy() 270 0.4177 0.4218 0.4258 18.31% WarpX::MacroscopicEvolveE() 5 0.3804 0.3825 0.388 16.69% Diagnostics::FilterComputePackFlush() 6 0.235 0.2354 0.2357 10.14% MultiFab::Copy() 126 0.2111 0.2146 0.2175 9.36% ablastr::utils::communication::FillBoundary 252 0.1023 0.1218 0.1434 6.17% FabArray::FillBoundary() 222 0.08067 0.09555 0.1125 4.84% ablastr::utils::communication::ParallelCopy 252 0.06563 0.08144 0.1013 4.36% FabArray::ParallelCopy() 252 0.06475 0.08064 0.1005 4.32% WarpX::EvolveB() 10 0.08505 0.08627 0.08831 3.80% FillBoundary_nowait() 252 0.07727 0.0808 0.08505 3.66% sample::Coarsen() 12 0.07511 0.07549 0.07629 3.28% FabArray::ParallelCopy_finish() 252 0.03097 0.04951 0.06798 2.92% FillBoundary_finish() 252 0.02612 0.04235 0.05962 2.56% FabArray::LinComb() 108 0.04652 0.04781 0.0489 2.10% FabArray::ParallelCopy_nowait() 252 0.02724 0.03035 0.0329 1.42% WarpX::EvolveBLondon() 5 0.02906 0.03078 0.03277 1.41% FabArray::FillBoundaryAndSync() 30 0.02104 0.02575 0.03045 1.31% FlushFormatPlotfile::WriteToFile() 1 0.01773 0.01808 0.01879 0.81% WriteMultiLevelPlotfile() 1 0.01771 0.01801 0.01855 0.80% FillBoundaryAndSync_nowait() 30 0.01707 0.01779 0.01841 0.79% VisMF::Write(FabArray) 1 0.0171 0.01747 0.01796 0.77% WarpX::DampPML() 5 0.01296 0.01303 0.01309 0.56% FillBoundaryAndSync_finish() 30 0.003769 0.00791 0.01204 0.52% Other 670 0.009276 0.01051 0.01209 0.52% -------------------------------------------------------------------------------------------- END REGION WarpX::Evolve() Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [london_Rittweger_3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.dx(nvals = 3) :: [(prob_hi-prob_lo), /, nx] [TOP]::my_constants.dy(nvals = 3) :: [(prob_hi-prob_lo), /, ny] [TOP]::my_constants.obs(nvals = 1) :: [-400.e-9] [TOP]::plt(nvals = 1) :: [london_Rittweger_3d_plt] Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 4 5 B 8 B 12 B 8192 KiB 8192 KiB 8192 KiB main() 184 3299 B 3305 B 3310 B 3584 B 3584 B 3584 B WarpX::InitData() 52 2457 B 2459 B 2461 B 2560 B 2560 B 2560 B Unprofiled 76 0 B 0 B 0 B 256 B 256 B 256 B -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------- WarpX::InitData() 280 130 MiB 130 MiB 130 MiB 135 MiB 135 MiB 135 MiB PML::Exchange 2112 4881 KiB 4950 KiB 5026 KiB 9974 KiB 9974 KiB 9974 KiB FillBoundary_nowait() 1932 16 KiB 20 KiB 24 KiB 601 KiB 606 KiB 613 KiB FabArray::ParallelCopy_nowait() 2112 943 B 1002 B 1101 B 76 KiB 76 KiB 76 KiB --------------------------------------------------------------------------------------------------------------- AMReX (26.06-31-g3c3bbaa34cd3) finalized