Initializing AMReX (26.08-6-g09dcef899fc3)... MPI initialized with 4 MPI processes MPI initialized with thread support level 3 AMReX (26.08-6-g09dcef899fc3) initialized London class is constructed WarpX (79466d33388f) _____ __ .__ / _ \________/ |_ ____ _____ |__| ______ / /_\ \_ __ \ __\/ __ \ / \| |/ ___/ / | \ | \/| | \ ___/| Y Y \ |\___ \ \____|__ /__| |__| \___ >__|_| /__/____ > \/ \/ \/ \/ Level 0: dt = 4.333124703e-18 ; dx = 1e-08 ; dy = 1e-08 ; dz = 1e-08 --- INFO : we are in init data of macro calling london Grids Summary: Level 0 8 grids 2097152 cells 100 % of domain smallest grid: 64 x 64 x 64 biggest grid: 64 x 64 x 64 ------------------------------------------------------------------------------- --------------------------- MAIN EM PIC PARAMETERS ---------------------------- ------------------------------------------------------------------------------- Precision: | DOUBLE Particle precision: | DOUBLE Geometry: | 3D (XYZ) Operation mode: | Electromagnetic | - macroscopic | - Lax-Wendroff algorithm ------------------------------------------------------------------------------- Current Deposition: | Esirkepov Particle Pusher: | Boris Charge Deposition: | standard Field Gathering: | energy-conserving Particle Shape Factor:| 0 ------------------------------------------------------------------------------- Maxwell Solver: | Yee ------------------------------------------------------------------------------- For full input parameters, see the file: warpx_used_inputs --- INFO : Writing plotfile diags/plt000000 STEP 1 starts ... evolve london J using E in evolve london j evolve london J using E Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [london_Rittweger_3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.dx(nvals = 3) :: [(prob_hi-prob_lo), /, nx] [TOP]::my_constants.dy(nvals = 3) :: [(prob_hi-prob_lo), /, ny] [TOP]::my_constants.obs(nvals = 1) :: [-400.e-9] [TOP]::plt(nvals = 1) :: [london_Rittweger_3d_plt] **** WARNINGS ****************************************************************** * GLOBAL warning list after [ FIRST STEP ] * * --> [! ] [Species] [raised 4 times] * particles.nspecies is ignored. Just use particles.species_names please. * @ Raised by: ALL * ******************************************************************************** STEP 1 ends. TIME = 4.333124703e-18 DT = 4.333124703e-18 Evolve time = 0.353627616 s; This step = 0.353627616 s; Avg. per step = 0.353627616 s STEP 2 starts ... in evolve london j evolve london J using E STEP 2 ends. TIME = 8.666249407e-18 DT = 4.333124703e-18 Evolve time = 0.680765529 s; This step = 0.327137913 s; Avg. per step = 0.3403827645 s STEP 3 starts ... in evolve london j evolve london J using E STEP 3 ends. TIME = 1.299937411e-17 DT = 4.333124703e-18 Evolve time = 1.001236183 s; This step = 0.320470654 s; Avg. per step = 0.3337453943 s STEP 4 starts ... in evolve london j evolve london J using E STEP 4 ends. TIME = 1.733249881e-17 DT = 4.333124703e-18 Evolve time = 1.31565914 s; This step = 0.314422957 s; Avg. per step = 0.328914785 s STEP 5 starts ... in evolve london j evolve london J using E --- INFO : Writing plotfile diags/plt000005 STEP 5 ends. TIME = 2.166562352e-17 DT = 4.333124703e-18 Evolve time = 1.833020781 s; This step = 0.517361641 s; Avg. per step = 0.3666041562 s Total Time : 2.252132393 TinyProfiler total time across processes [min...avg...max]: 2.255 ... 2.258 ... 2.262 -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- FabArray::setVal() 291 0.5182 0.561 0.5929 26.22% amrex::Copy() 282 0.4329 0.4378 0.4435 19.61% WarpX::MacroscopicEvolveE() 5 0.3794 0.3816 0.3876 17.14% WarpX::InitData() 1 0.1188 0.1246 0.1299 5.74% PML::Exchange 132 0.1097 0.1182 0.1241 5.49% sample::Coarsen() 18 0.1171 0.1179 0.1194 5.28% FabArray::ParallelCopy_finish() 264 0.05271 0.08103 0.106 4.69% WarpX::EvolveB() 10 0.08578 0.08675 0.08829 3.90% FillBoundary_nowait() 264 0.08081 0.08371 0.0871 3.85% FillBoundary_finish() 264 0.03353 0.05466 0.07515 3.32% FabArray::LinComb() 114 0.04757 0.04881 0.04948 2.19% VisMF::Write(FabArray) 2 0.03423 0.03501 0.03592 1.59% WarpX::EvolveBLondon() 5 0.0302 0.03086 0.03189 1.41% FabArray::ParallelCopy_nowait() 264 0.02786 0.02979 0.03125 1.38% WarpX::OneStep_nosub() 5 0.02282 0.0229 0.02296 1.02% WarpX::DampPML() 5 0.01243 0.01278 0.01335 0.59% WarpX::Evolve::step 5 0.004782 0.00577 0.006756 0.30% ParticleCopyPlan::doHandShake 1 1.771e-05 0.003438 0.006206 0.27% WriteMultiLevelPlotfile() 2 3.598e-05 0.001241 0.001892 0.08% main() 1 0.0007744 0.00108 0.001428 0.06% ablastr::utils::communication::ParallelCopy 264 0.0007818 0.0008431 0.0008841 0.04% FabArray::ParallelCopy() 264 0.0007617 0.00079 0.0008228 0.04% FlushFormatPlotfile::WriteToFile() 2 3.917e-05 0.0002224 0.0007562 0.03% ablastr::utils::communication::FillBoundary 264 0.0004652 0.0005947 0.0007279 0.03% MultiFab::Copy() 132 0.0004367 0.0004498 0.0004631 0.02% FabArray::FillBoundary() 234 0.0003075 0.0003476 0.0003943 0.02% Diagnostics::FilterComputePackFlush() 7 0.0001563 0.0001648 0.0001845 0.01% FillBoundaryAndSync_finish() 30 4.775e-05 5.769e-05 7.878e-05 0.00% FabArray::FillBoundaryAndSync() 30 4.537e-05 5.538e-05 6.651e-05 0.00% FillBoundaryAndSync_nowait() 30 2.766e-05 3.87e-05 5.034e-05 0.00% ParticleCopyPlan::buildMPIStart 1 7.626e-06 9.746e-06 1.151e-05 0.00% ParticleContainer::Redistribute_impl() 1 3.805e-06 5.269e-06 8.271e-06 0.00% AmrMesh::MakeDistributionMap() 1 2.375e-06 4.739e-06 7.941e-06 0.00% ParticleCopyPlan::build 1 2.866e-06 4.273e-06 6.801e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.081e-06 4.223e-06 4.85e-06 0.00% WarpX::Evolve() 1 3.61e-06 4.086e-06 4.657e-06 0.00% REG::WarpX::Evolve() 1 2.191e-06 2.415e-06 2.52e-06 0.00% Other 737 0.003199 0.006587 0.01005 0.44% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- main() 1 2.246 2.249 2.252 99.58% REG::WarpX::Evolve() 1 1.933 1.933 1.934 85.51% WarpX::Evolve() 1 1.933 1.933 1.934 85.51% WarpX::Evolve::step 5 1.833 1.833 1.834 81.08% WarpX::OneStep_nosub() 5 1.258 1.27 1.282 56.68% PML::Exchange 132 1.209 1.233 1.256 55.53% FabArray::setVal() 291 0.5182 0.561 0.5929 26.22% amrex::Copy() 282 0.4329 0.4378 0.4435 19.61% WarpX::MacroscopicEvolveE() 5 0.3794 0.3816 0.3876 17.14% Diagnostics::FilterComputePackFlush() 7 0.3484 0.3539 0.3588 15.87% WarpX::InitData() 1 0.3116 0.3147 0.3185 14.08% MultiFab::Copy() 132 0.2178 0.2212 0.2227 9.85% ablastr::utils::communication::FillBoundary 264 0.114 0.1382 0.1627 7.19% ablastr::utils::communication::ParallelCopy 264 0.08737 0.1143 0.1401 6.19% FabArray::ParallelCopy() 264 0.08655 0.1134 0.1392 6.15% FabArray::FillBoundary() 234 0.08796 0.107 0.1255 5.55% sample::Coarsen() 18 0.1171 0.1179 0.1194 5.28% FabArray::ParallelCopy_finish() 264 0.05271 0.08103 0.106 4.69% FillBoundary_nowait() 264 0.08211 0.08502 0.08844 3.91% WarpX::EvolveB() 10 0.08578 0.08675 0.08829 3.90% FillBoundary_finish() 264 0.03353 0.05466 0.07515 3.32% FabArray::LinComb() 114 0.04757 0.04881 0.04948 2.19% FlushFormatPlotfile::WriteToFile() 2 0.03522 0.03653 0.03812 1.69% WriteMultiLevelPlotfile() 2 0.03518 0.03631 0.03737 1.65% FabArray::FillBoundaryAndSync() 30 0.02483 0.03062 0.03667 1.62% VisMF::Write(FabArray) 2 0.03423 0.03501 0.03592 1.59% FabArray::ParallelCopy_nowait() 264 0.02957 0.03159 0.03303 1.46% WarpX::EvolveBLondon() 5 0.0302 0.03086 0.03189 1.41% FillBoundaryAndSync_nowait() 30 0.01682 0.01812 0.01902 0.84% FillBoundaryAndSync_finish() 30 0.007028 0.01244 0.01759 0.78% WarpX::DampPML() 5 0.01243 0.01278 0.01335 0.59% ParticleContainer::Redistribute_impl() 1 0.0001708 0.003599 0.00637 0.28% ParticleCopyPlan::build 1 3.157e-05 0.003453 0.006221 0.28% ParticleCopyPlan::buildMPIStart 1 2.824e-05 0.003448 0.006216 0.27% ParticleCopyPlan::doHandShake 1 1.771e-05 0.003438 0.006206 0.27% AmrMesh::MakeDistributionMap() 1 2.152e-05 0.003099 0.006184 0.27% DistributionMapping::SFCProcessorMapDoIt() 1 1.553e-05 0.003094 0.006181 0.27% Other 737 0.01095 0.01589 0.02047 0.90% -------------------------------------------------------------------------------------------- BEGIN REGION WarpX::Evolve() -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- FabArray::setVal() 252 0.4443 0.4866 0.5163 22.83% amrex::Copy() 270 0.4137 0.4178 0.4233 18.72% WarpX::MacroscopicEvolveE() 5 0.3794 0.3816 0.3876 17.14% PML::Exchange 126 0.1049 0.1133 0.1191 5.27% FabArray::ParallelCopy_finish() 252 0.03878 0.0744 0.1053 4.65% WarpX::EvolveB() 10 0.08578 0.08675 0.08829 3.90% FillBoundary_nowait() 252 0.07635 0.07929 0.08271 3.66% FillBoundary_finish() 252 0.03302 0.05411 0.07454 3.30% sample::Coarsen() 12 0.06852 0.0689 0.06974 3.08% FabArray::LinComb() 108 0.04502 0.04588 0.04647 2.05% WarpX::EvolveBLondon() 5 0.0302 0.03086 0.03189 1.41% FabArray::ParallelCopy_nowait() 252 0.02672 0.02845 0.02981 1.32% WarpX::OneStep_nosub() 5 0.02282 0.0229 0.02296 1.02% VisMF::Write(FabArray) 1 0.01738 0.01758 0.01797 0.79% WarpX::DampPML() 5 0.01243 0.01278 0.01335 0.59% WarpX::Evolve::step 5 0.004782 0.00577 0.006756 0.30% ablastr::utils::communication::ParallelCopy 252 0.0007452 0.0008156 0.0008574 0.04% FabArray::ParallelCopy() 252 0.0007309 0.0007618 0.000789 0.03% WriteMultiLevelPlotfile() 1 1.638e-05 0.0004802 0.0007127 0.03% ablastr::utils::communication::FillBoundary 252 0.000445 0.0005742 0.0007057 0.03% MultiFab::Copy() 126 0.0004197 0.0004359 0.0004511 0.02% FabArray::FillBoundary() 222 0.0002959 0.0003336 0.0003792 0.02% FlushFormatPlotfile::WriteToFile() 1 1.459e-05 9.723e-05 0.0003375 0.01% Diagnostics::FilterComputePackFlush() 6 0.000102 0.000105 0.0001084 0.00% FillBoundaryAndSync_finish() 30 4.775e-05 5.769e-05 7.878e-05 0.00% FabArray::FillBoundaryAndSync() 30 4.537e-05 5.538e-05 6.651e-05 0.00% FillBoundaryAndSync_nowait() 30 2.766e-05 3.87e-05 5.034e-05 0.00% WarpX::Evolve() 1 3.61e-06 4.086e-06 4.657e-06 0.00% REG::WarpX::Evolve() 1 2.191e-06 2.415e-06 2.52e-06 0.00% Other 670 0.002312 0.002554 0.002796 0.12% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- REG::WarpX::Evolve() 1 1.933 1.933 1.934 85.51% WarpX::Evolve() 1 1.933 1.933 1.934 85.51% WarpX::Evolve::step 5 1.833 1.833 1.834 81.08% WarpX::OneStep_nosub() 5 1.258 1.27 1.282 56.68% PML::Exchange 126 1.149 1.17 1.198 52.95% FabArray::setVal() 252 0.4443 0.4866 0.5163 22.83% amrex::Copy() 270 0.4137 0.4178 0.4233 18.72% WarpX::MacroscopicEvolveE() 5 0.3794 0.3816 0.3876 17.14% Diagnostics::FilterComputePackFlush() 6 0.2172 0.2175 0.2179 9.64% MultiFab::Copy() 126 0.2091 0.2115 0.213 9.42% ablastr::utils::communication::FillBoundary 252 0.1086 0.1328 0.1573 6.95% ablastr::utils::communication::ParallelCopy 252 0.07157 0.1058 0.1374 6.07% FabArray::ParallelCopy() 252 0.07076 0.105 0.1365 6.04% FabArray::FillBoundary() 222 0.08264 0.1017 0.1201 5.31% FabArray::ParallelCopy_finish() 252 0.03878 0.0744 0.1053 4.65% WarpX::EvolveB() 10 0.08578 0.08675 0.08829 3.90% FillBoundary_nowait() 252 0.07732 0.08026 0.0837 3.70% FillBoundary_finish() 252 0.03302 0.05411 0.07454 3.30% sample::Coarsen() 12 0.06852 0.0689 0.06974 3.08% FabArray::LinComb() 108 0.04502 0.04588 0.04647 2.05% FabArray::FillBoundaryAndSync() 30 0.02483 0.03062 0.03667 1.62% WarpX::EvolveBLondon() 5 0.0302 0.03086 0.03189 1.41% FabArray::ParallelCopy_nowait() 252 0.02799 0.02983 0.0312 1.38% FillBoundaryAndSync_nowait() 30 0.01682 0.01812 0.01902 0.84% FlushFormatPlotfile::WriteToFile() 1 0.01754 0.01818 0.0189 0.84% WriteMultiLevelPlotfile() 1 0.01752 0.01809 0.01857 0.82% VisMF::Write(FabArray) 1 0.01738 0.01758 0.01797 0.79% FillBoundaryAndSync_finish() 30 0.007028 0.01244 0.01759 0.78% WarpX::DampPML() 5 0.01243 0.01278 0.01335 0.59% Other 670 0.009332 0.01113 0.01248 0.55% -------------------------------------------------------------------------------------------- END REGION WarpX::Evolve() Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [london_Rittweger_3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.dx(nvals = 3) :: [(prob_hi-prob_lo), /, nx] [TOP]::my_constants.dy(nvals = 3) :: [(prob_hi-prob_lo), /, ny] [TOP]::my_constants.obs(nvals = 1) :: [-400.e-9] [TOP]::plt(nvals = 1) :: [london_Rittweger_3d_plt] Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 4 6 B 8 B 11 B 8192 KiB 8192 KiB 8192 KiB main() 184 3300 B 3303 B 3308 B 3584 B 3584 B 3584 B WarpX::InitData() 52 2457 B 2458 B 2461 B 2560 B 2560 B 2560 B Unprofiled 76 0 B 0 B 0 B 256 B 256 B 256 B -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------- WarpX::InitData() 280 130 MiB 130 MiB 130 MiB 135 MiB 135 MiB 135 MiB PML::Exchange 2112 4813 KiB 4897 KiB 4998 KiB 9974 KiB 9974 KiB 9974 KiB FillBoundary_nowait() 1932 17 KiB 22 KiB 28 KiB 601 KiB 606 KiB 613 KiB FabArray::ParallelCopy_nowait() 2112 900 B 1080 B 1229 B 76 KiB 76 KiB 76 KiB --------------------------------------------------------------------------------------------------------------- AMReX (26.08-6-g09dcef899fc3) finalized