Initializing AMReX (26.08-13-g52ff27ef5904)... MPI initialized with 4 MPI processes MPI initialized with thread support level 3 AMReX (26.08-13-g52ff27ef5904) initialized London class is constructed WarpX (79466d33388f) _____ __ .__ / _ \________/ |_ ____ _____ |__| ______ / /_\ \_ __ \ __\/ __ \ / \| |/ ___/ / | \ | \/| | \ ___/| Y Y \ |\___ \ \____|__ /__| |__| \___ >__|_| /__/____ > \/ \/ \/ \/ Level 0: dt = 4.333124703e-18 ; dx = 1e-08 ; dy = 1e-08 ; dz = 1e-08 --- INFO : we are in init data of macro calling london Grids Summary: Level 0 8 grids 2097152 cells 100 % of domain smallest grid: 64 x 64 x 64 biggest grid: 64 x 64 x 64 ------------------------------------------------------------------------------- --------------------------- MAIN EM PIC PARAMETERS ---------------------------- ------------------------------------------------------------------------------- Precision: | DOUBLE Particle precision: | DOUBLE Geometry: | 3D (XYZ) Operation mode: | Electromagnetic | - macroscopic | - Lax-Wendroff algorithm ------------------------------------------------------------------------------- Current Deposition: | Esirkepov Particle Pusher: | Boris Charge Deposition: | standard Field Gathering: | energy-conserving Particle Shape Factor:| 0 ------------------------------------------------------------------------------- Maxwell Solver: | Yee ------------------------------------------------------------------------------- For full input parameters, see the file: warpx_used_inputs --- INFO : Writing plotfile diags/plt000000 STEP 1 starts ... evolve london J using E in evolve london j evolve london J using E Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [london_Rittweger_3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.dx(nvals = 3) :: [(prob_hi-prob_lo), /, nx] [TOP]::my_constants.dy(nvals = 3) :: [(prob_hi-prob_lo), /, ny] [TOP]::my_constants.obs(nvals = 1) :: [-400.e-9] [TOP]::plt(nvals = 1) :: [london_Rittweger_3d_plt] **** WARNINGS ****************************************************************** * GLOBAL warning list after [ FIRST STEP ] * * --> [! ] [Species] [raised 4 times] * particles.nspecies is ignored. Just use particles.species_names please. * @ Raised by: ALL * ******************************************************************************** STEP 1 ends. TIME = 4.333124703e-18 DT = 4.333124703e-18 Evolve time = 0.350561087 s; This step = 0.350561087 s; Avg. per step = 0.350561087 s STEP 2 starts ... in evolve london j evolve london J using E STEP 2 ends. TIME = 8.666249407e-18 DT = 4.333124703e-18 Evolve time = 0.679491234 s; This step = 0.328930147 s; Avg. per step = 0.339745617 s STEP 3 starts ... in evolve london j evolve london J using E STEP 3 ends. TIME = 1.299937411e-17 DT = 4.333124703e-18 Evolve time = 0.996710566 s; This step = 0.317219332 s; Avg. per step = 0.3322368553 s STEP 4 starts ... in evolve london j evolve london J using E STEP 4 ends. TIME = 1.733249881e-17 DT = 4.333124703e-18 Evolve time = 1.327956697 s; This step = 0.331246131 s; Avg. per step = 0.3319891743 s STEP 5 starts ... in evolve london j evolve london J using E --- INFO : Writing plotfile diags/plt000005 STEP 5 ends. TIME = 2.166562352e-17 DT = 4.333124703e-18 Evolve time = 1.840084527 s; This step = 0.51212783 s; Avg. per step = 0.3680169054 s Total Time : 2.292367002 TinyProfiler total time across processes [min...avg...max]: 2.295 ... 2.298 ... 2.3 -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- FabArray::setVal() 291 0.5515 0.5937 0.623 27.08% amrex::Copy() 282 0.4163 0.4241 0.4317 18.77% WarpX::MacroscopicEvolveE() 5 0.3775 0.3802 0.387 16.82% WarpX::InitData() 1 0.1182 0.1359 0.1547 6.73% FabArray::ParallelCopy_finish() 264 0.04321 0.07797 0.1412 6.14% PML::Exchange 132 0.1168 0.1256 0.1298 5.64% sample::Coarsen() 18 0.1142 0.1151 0.1174 5.10% WarpX::EvolveB() 10 0.08547 0.08657 0.08961 3.90% FillBoundary_nowait() 264 0.07876 0.08137 0.0833 3.62% FillBoundary_finish() 264 0.0466 0.05028 0.05402 2.35% FabArray::LinComb() 114 0.04695 0.04849 0.05038 2.19% ParticleCopyPlan::doHandShake 1 1.468e-05 0.01935 0.03829 1.66% VisMF::Write(FabArray) 2 0.03452 0.03553 0.0368 1.60% WarpX::EvolveBLondon() 5 0.03044 0.03118 0.03284 1.43% FabArray::ParallelCopy_nowait() 264 0.02673 0.02888 0.03115 1.35% WarpX::OneStep_nosub() 5 0.02262 0.02279 0.02314 1.01% WarpX::DampPML() 5 0.0127 0.01287 0.013 0.56% WarpX::Evolve::step 5 0.004946 0.006332 0.007679 0.33% WriteMultiLevelPlotfile() 2 3.286e-05 0.002189 0.003054 0.13% main() 1 0.0007541 0.001276 0.001608 0.07% FabArray::ParallelCopy() 264 0.0006987 0.0008197 0.0009951 0.04% ablastr::utils::communication::ParallelCopy 264 0.0007445 0.0008023 0.0008375 0.04% FlushFormatPlotfile::WriteToFile() 2 3.406e-05 0.0001755 0.00058 0.03% ablastr::utils::communication::FillBoundary 264 0.0004544 0.0004824 0.0004942 0.02% MultiFab::Copy() 132 0.0004216 0.0004426 0.0004669 0.02% FabArray::FillBoundary() 234 0.0003371 0.0003443 0.0003498 0.02% Diagnostics::FilterComputePackFlush() 7 0.0001421 0.0001565 0.0001695 0.01% FillBoundaryAndSync_finish() 30 5.103e-05 6.065e-05 7.068e-05 0.00% FabArray::FillBoundaryAndSync() 30 4.213e-05 4.893e-05 5.583e-05 0.00% FillBoundaryAndSync_nowait() 30 3.008e-05 3.462e-05 3.777e-05 0.00% ParticleCopyPlan::buildMPIStart 1 7.104e-06 8.163e-06 1.023e-05 0.00% ParticleCopyPlan::build 1 2.997e-06 5.905e-06 8.231e-06 0.00% ParticleContainer::Redistribute_impl() 1 4.275e-06 5.419e-06 7.164e-06 0.00% AmrMesh::MakeDistributionMap() 1 1.352e-06 3.122e-06 6.847e-06 0.00% WarpX::Evolve() 1 3.725e-06 4.309e-06 5.372e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.082e-06 3.83e-06 4.581e-06 0.00% REG::WarpX::Evolve() 1 2.509e-06 2.72e-06 2.897e-06 0.00% Other 737 0.003187 0.006326 0.009685 0.42% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- main() 1 2.287 2.289 2.292 99.66% REG::WarpX::Evolve() 1 1.941 1.941 1.942 84.43% WarpX::Evolve() 1 1.941 1.941 1.942 84.43% WarpX::Evolve::step 5 1.84 1.841 1.841 80.05% WarpX::OneStep_nosub() 5 1.279 1.279 1.279 55.62% PML::Exchange 132 1.227 1.251 1.265 54.98% FabArray::setVal() 291 0.5515 0.5937 0.623 27.08% amrex::Copy() 282 0.4163 0.4241 0.4317 18.77% WarpX::MacroscopicEvolveE() 5 0.3775 0.3802 0.387 16.82% Diagnostics::FilterComputePackFlush() 7 0.3509 0.3577 0.3635 15.80% WarpX::InitData() 1 0.3443 0.3467 0.349 15.17% MultiFab::Copy() 132 0.2114 0.2166 0.2225 9.67% ablastr::utils::communication::ParallelCopy 264 0.0731 0.1102 0.1759 7.65% FabArray::ParallelCopy() 264 0.07236 0.1094 0.1751 7.61% FabArray::ParallelCopy_finish() 264 0.04321 0.07797 0.1412 6.14% ablastr::utils::communication::FillBoundary 264 0.1284 0.1316 0.1358 5.90% sample::Coarsen() 18 0.1142 0.1151 0.1174 5.10% FabArray::FillBoundary() 234 0.09524 0.1024 0.1108 4.82% WarpX::EvolveB() 10 0.08547 0.08657 0.08961 3.90% FillBoundary_nowait() 264 0.07999 0.08265 0.0846 3.68% FillBoundary_finish() 264 0.0466 0.05028 0.05402 2.35% FabArray::LinComb() 114 0.04695 0.04849 0.05038 2.19% FlushFormatPlotfile::WriteToFile() 2 0.03737 0.03795 0.03896 1.69% WriteMultiLevelPlotfile() 2 0.03706 0.03777 0.03892 1.69% ParticleContainer::Redistribute_impl() 1 0.000217 0.01953 0.03846 1.67% ParticleCopyPlan::build 1 2.835e-05 0.01937 0.03831 1.67% ParticleCopyPlan::buildMPIStart 1 2.179e-05 0.01936 0.0383 1.67% ParticleCopyPlan::doHandShake 1 1.468e-05 0.01935 0.03829 1.66% VisMF::Write(FabArray) 2 0.03452 0.03553 0.0368 1.60% FabArray::FillBoundaryAndSync() 30 0.02443 0.02875 0.03336 1.45% FabArray::ParallelCopy_nowait() 264 0.0284 0.03065 0.03294 1.43% WarpX::EvolveBLondon() 5 0.03044 0.03118 0.03284 1.43% FillBoundaryAndSync_nowait() 30 0.0175 0.01788 0.01833 0.80% FillBoundaryAndSync_finish() 30 0.006664 0.01083 0.01544 0.67% WarpX::DampPML() 5 0.0127 0.01287 0.013 0.56% AmrMesh::MakeDistributionMap() 1 2.264e-05 0.002893 0.005915 0.26% DistributionMapping::SFCProcessorMapDoIt() 1 2.129e-05 0.002889 0.005908 0.26% Other 737 0.01024 0.01473 0.02021 0.88% -------------------------------------------------------------------------------------------- BEGIN REGION WarpX::Evolve() -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- FabArray::setVal() 252 0.4781 0.5155 0.5417 23.55% amrex::Copy() 270 0.4001 0.4074 0.4146 18.02% WarpX::MacroscopicEvolveE() 5 0.3775 0.3802 0.387 16.82% PML::Exchange 126 0.1116 0.1209 0.1253 5.45% FabArray::ParallelCopy_finish() 252 0.04274 0.06976 0.1242 5.40% WarpX::EvolveB() 10 0.08547 0.08657 0.08961 3.90% FillBoundary_nowait() 252 0.07493 0.07723 0.07887 3.43% sample::Coarsen() 12 0.06813 0.06852 0.06946 3.02% FillBoundary_finish() 252 0.03653 0.04498 0.05345 2.32% FabArray::LinComb() 108 0.04416 0.04571 0.04744 2.06% WarpX::EvolveBLondon() 5 0.03044 0.03118 0.03284 1.43% FabArray::ParallelCopy_nowait() 252 0.02561 0.0277 0.02991 1.30% WarpX::OneStep_nosub() 5 0.02262 0.02279 0.02314 1.01% VisMF::Write(FabArray) 1 0.01734 0.01778 0.0182 0.79% WarpX::DampPML() 5 0.0127 0.01287 0.013 0.56% WarpX::Evolve::step 5 0.004946 0.006332 0.007679 0.33% FabArray::ParallelCopy() 252 0.0006763 0.000796 0.0009652 0.04% ablastr::utils::communication::ParallelCopy 252 0.0007241 0.0007793 0.0008148 0.04% WriteMultiLevelPlotfile() 1 1.502e-05 0.0005272 0.0007443 0.03% ablastr::utils::communication::FillBoundary 252 0.0004366 0.0004624 0.000475 0.02% MultiFab::Copy() 126 0.0004095 0.00043 0.0004527 0.02% FabArray::FillBoundary() 222 0.0003246 0.0003296 0.0003375 0.01% FlushFormatPlotfile::WriteToFile() 1 1.34e-05 7.019e-05 0.0002357 0.01% Diagnostics::FilterComputePackFlush() 6 9.823e-05 0.0001033 0.0001097 0.00% FillBoundaryAndSync_finish() 30 5.103e-05 6.065e-05 7.068e-05 0.00% FabArray::FillBoundaryAndSync() 30 4.213e-05 4.893e-05 5.583e-05 0.00% FillBoundaryAndSync_nowait() 30 3.008e-05 3.462e-05 3.777e-05 0.00% WarpX::Evolve() 1 3.725e-06 4.309e-06 5.372e-06 0.00% REG::WarpX::Evolve() 1 2.509e-06 2.72e-06 2.897e-06 0.00% Other 670 0.002319 0.002514 0.002693 0.12% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- REG::WarpX::Evolve() 1 1.941 1.941 1.942 84.43% WarpX::Evolve() 1 1.941 1.941 1.942 84.43% WarpX::Evolve::step 5 1.84 1.841 1.841 80.05% WarpX::OneStep_nosub() 5 1.279 1.279 1.279 55.62% PML::Exchange 126 1.169 1.19 1.202 52.25% FabArray::setVal() 252 0.4781 0.5155 0.5417 23.55% amrex::Copy() 270 0.4001 0.4074 0.4146 18.02% WarpX::MacroscopicEvolveE() 5 0.3775 0.3802 0.387 16.82% Diagnostics::FilterComputePackFlush() 6 0.2203 0.2207 0.2215 9.63% MultiFab::Copy() 126 0.2031 0.2077 0.2131 9.26% ablastr::utils::communication::ParallelCopy 252 0.07107 0.1004 0.1573 6.84% FabArray::ParallelCopy() 252 0.07035 0.09962 0.1565 6.80% ablastr::utils::communication::FillBoundary 252 0.1137 0.1218 0.1308 5.69% FabArray::ParallelCopy_finish() 252 0.04274 0.06976 0.1242 5.40% FabArray::FillBoundary() 222 0.08057 0.09258 0.1059 4.60% WarpX::EvolveB() 10 0.08547 0.08657 0.08961 3.90% FillBoundary_nowait() 252 0.07584 0.07818 0.07985 3.47% sample::Coarsen() 12 0.06813 0.06852 0.06946 3.02% FillBoundary_finish() 252 0.03653 0.04498 0.05345 2.32% FabArray::LinComb() 108 0.04416 0.04571 0.04744 2.06% FabArray::FillBoundaryAndSync() 30 0.02443 0.02875 0.03336 1.45% WarpX::EvolveBLondon() 5 0.03044 0.03118 0.03284 1.43% FabArray::ParallelCopy_nowait() 252 0.02687 0.02906 0.03132 1.36% FlushFormatPlotfile::WriteToFile() 1 0.01811 0.0184 0.01856 0.81% WriteMultiLevelPlotfile() 1 0.01809 0.01833 0.01851 0.80% FillBoundaryAndSync_nowait() 30 0.0175 0.01788 0.01833 0.80% VisMF::Write(FabArray) 1 0.01734 0.01778 0.0182 0.79% FillBoundaryAndSync_finish() 30 0.006664 0.01083 0.01544 0.67% WarpX::DampPML() 5 0.0127 0.01287 0.013 0.56% Other 670 0.008682 0.01022 0.01249 0.54% -------------------------------------------------------------------------------------------- END REGION WarpX::Evolve() Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [london_Rittweger_3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.dx(nvals = 3) :: [(prob_hi-prob_lo), /, nx] [TOP]::my_constants.dy(nvals = 3) :: [(prob_hi-prob_lo), /, ny] [TOP]::my_constants.obs(nvals = 1) :: [-400.e-9] [TOP]::plt(nvals = 1) :: [london_Rittweger_3d_plt] Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 4 5 B 7 B 9 B 8192 KiB 8192 KiB 8192 KiB main() 184 3300 B 3305 B 3309 B 3584 B 3584 B 3584 B WarpX::InitData() 52 2432 B 2441 B 2451 B 2560 B 2560 B 2560 B Unprofiled 76 0 B 0 B 0 B 256 B 256 B 256 B -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------- WarpX::InitData() 280 129 MiB 129 MiB 129 MiB 135 MiB 135 MiB 135 MiB PML::Exchange 2112 4763 KiB 4848 KiB 4941 KiB 9974 KiB 9974 KiB 9974 KiB FillBoundary_nowait() 1932 20 KiB 21 KiB 21 KiB 601 KiB 606 KiB 613 KiB FabArray::ParallelCopy_nowait() 2112 759 B 1059 B 1542 B 76 KiB 76 KiB 76 KiB --------------------------------------------------------------------------------------------------------------- AMReX (26.08-13-g52ff27ef5904) finalized