Initializing AMReX (26.08-18-g057940244648)... MPI initialized with 4 MPI processes MPI initialized with thread support level 3 AMReX (26.08-18-g057940244648) initialized London class is constructed WarpX (79466d33388f) _____ __ .__ / _ \________/ |_ ____ _____ |__| ______ / /_\ \_ __ \ __\/ __ \ / \| |/ ___/ / | \ | \/| | \ ___/| Y Y \ |\___ \ \____|__ /__| |__| \___ >__|_| /__/____ > \/ \/ \/ \/ Level 0: dt = 4.333124703e-18 ; dx = 1e-08 ; dy = 1e-08 ; dz = 1e-08 --- INFO : we are in init data of macro calling london Grids Summary: Level 0 8 grids 2097152 cells 100 % of domain smallest grid: 64 x 64 x 64 biggest grid: 64 x 64 x 64 ------------------------------------------------------------------------------- --------------------------- MAIN EM PIC PARAMETERS ---------------------------- ------------------------------------------------------------------------------- Precision: | DOUBLE Particle precision: | DOUBLE Geometry: | 3D (XYZ) Operation mode: | Electromagnetic | - macroscopic | - Lax-Wendroff algorithm ------------------------------------------------------------------------------- Current Deposition: | Esirkepov Particle Pusher: | Boris Charge Deposition: | standard Field Gathering: | energy-conserving Particle Shape Factor:| 0 ------------------------------------------------------------------------------- Maxwell Solver: | Yee ------------------------------------------------------------------------------- For full input parameters, see the file: warpx_used_inputs --- INFO : Writing plotfile diags/plt000000 STEP 1 starts ... evolve london J using E in evolve london j evolve london J using E Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [london_Rittweger_3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.dx(nvals = 3) :: [(prob_hi-prob_lo), /, nx] [TOP]::my_constants.dy(nvals = 3) :: [(prob_hi-prob_lo), /, ny] [TOP]::my_constants.obs(nvals = 1) :: [-400.e-9] [TOP]::plt(nvals = 1) :: [london_Rittweger_3d_plt] **** WARNINGS ****************************************************************** * GLOBAL warning list after [ FIRST STEP ] * * --> [! ] [Species] [raised 4 times] * particles.nspecies is ignored. Just use particles.species_names please. * @ Raised by: ALL * ******************************************************************************** STEP 1 ends. TIME = 4.333124703e-18 DT = 4.333124703e-18 Evolve time = 0.353659229 s; This step = 0.353659229 s; Avg. per step = 0.353659229 s STEP 2 starts ... in evolve london j evolve london J using E STEP 2 ends. TIME = 8.666249407e-18 DT = 4.333124703e-18 Evolve time = 0.676412448 s; This step = 0.322753219 s; Avg. per step = 0.338206224 s STEP 3 starts ... in evolve london j evolve london J using E STEP 3 ends. TIME = 1.299937411e-17 DT = 4.333124703e-18 Evolve time = 0.996658388 s; This step = 0.32024594 s; Avg. per step = 0.3322194627 s STEP 4 starts ... in evolve london j evolve london J using E STEP 4 ends. TIME = 1.733249881e-17 DT = 4.333124703e-18 Evolve time = 1.326068244 s; This step = 0.329409856 s; Avg. per step = 0.331517061 s STEP 5 starts ... in evolve london j evolve london J using E --- INFO : Writing plotfile diags/plt000005 STEP 5 ends. TIME = 2.166562352e-17 DT = 4.333124703e-18 Evolve time = 1.848665658 s; This step = 0.522597414 s; Avg. per step = 0.3697331316 s Total Time : 2.279979878 TinyProfiler total time across processes [min...avg...max]: 2.288 ... 2.289 ... 2.289 -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- FabArray::setVal() 291 0.5097 0.5745 0.6323 27.62% amrex::Copy() 282 0.4253 0.4345 0.4436 19.38% WarpX::MacroscopicEvolveE() 5 0.3813 0.384 0.3895 17.02% WarpX::InitData() 1 0.1174 0.1276 0.138 6.03% PML::Exchange 132 0.109 0.1218 0.1321 5.77% FabArray::ParallelCopy_finish() 264 0.04631 0.08202 0.1241 5.42% sample::Coarsen() 18 0.1155 0.1162 0.1175 5.13% FillBoundary_finish() 264 0.01866 0.06279 0.1048 4.58% WarpX::EvolveB() 10 0.08665 0.08711 0.08813 3.85% FillBoundary_nowait() 264 0.08058 0.08273 0.08447 3.69% FabArray::LinComb() 114 0.04643 0.0482 0.04977 2.17% VisMF::Write(FabArray) 2 0.03529 0.03585 0.03692 1.61% WarpX::EvolveBLondon() 5 0.03062 0.03137 0.03171 1.39% FabArray::ParallelCopy_nowait() 264 0.02825 0.02989 0.03152 1.38% ParticleCopyPlan::doHandShake 1 1.211e-05 0.0121 0.02469 1.08% WarpX::OneStep_nosub() 5 0.02086 0.02093 0.02105 0.92% WarpX::DampPML() 5 0.0126 0.01287 0.01304 0.57% WarpX::Evolve::step 5 0.004603 0.005871 0.007168 0.31% WriteMultiLevelPlotfile() 2 0.0005212 0.001302 0.001768 0.08% main() 1 0.0007532 0.001167 0.001332 0.06% FabArray::ParallelCopy() 264 0.0007797 0.0008236 0.0009385 0.04% ablastr::utils::communication::ParallelCopy 264 0.0007762 0.0008026 0.0008522 0.04% FlushFormatPlotfile::WriteToFile() 2 3.554e-05 0.0002034 0.0006822 0.03% ablastr::utils::communication::FillBoundary 264 0.0004749 0.0005062 0.0005476 0.02% MultiFab::Copy() 132 0.0004148 0.0004483 0.0005073 0.02% FabArray::FillBoundary() 234 0.000319 0.0003398 0.0003541 0.02% Diagnostics::FilterComputePackFlush() 7 0.0001442 0.0001639 0.000171 0.01% FabArray::FillBoundaryAndSync() 30 4.028e-05 5.196e-05 6.424e-05 0.00% FillBoundaryAndSync_finish() 30 4.793e-05 5.576e-05 6.26e-05 0.00% FillBoundaryAndSync_nowait() 30 2.743e-05 3.471e-05 4.151e-05 0.00% ParticleCopyPlan::buildMPIStart 1 7.399e-06 8.237e-06 9.629e-06 0.00% ParticleCopyPlan::build 1 2.72e-06 6.237e-06 8.847e-06 0.00% ParticleContainer::Redistribute_impl() 1 4.012e-06 5.515e-06 7.898e-06 0.00% WarpX::Evolve() 1 4.017e-06 4.591e-06 5.91e-06 0.00% REG::WarpX::Evolve() 1 2.184e-06 3.005e-06 4.599e-06 0.00% Other 739 0.003214 0.003694 0.004225 0.18% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- main() 1 2.28 2.28 2.28 99.60% REG::WarpX::Evolve() 1 1.952 1.953 1.953 85.34% WarpX::Evolve() 1 1.952 1.953 1.953 85.34% WarpX::Evolve::step 5 1.849 1.849 1.849 80.79% WarpX::OneStep_nosub() 5 1.251 1.276 1.301 56.85% PML::Exchange 132 1.196 1.244 1.296 56.61% FabArray::setVal() 291 0.5097 0.5745 0.6323 27.62% amrex::Copy() 282 0.4253 0.4345 0.4436 19.38% WarpX::MacroscopicEvolveE() 5 0.3813 0.384 0.3895 17.02% Diagnostics::FilterComputePackFlush() 7 0.3569 0.3618 0.3664 16.00% WarpX::InitData() 1 0.325 0.3257 0.3266 14.27% MultiFab::Copy() 132 0.2145 0.2211 0.2277 9.95% ablastr::utils::communication::FillBoundary 264 0.1001 0.1449 0.1896 8.28% ablastr::utils::communication::ParallelCopy 264 0.07782 0.1154 0.1593 6.96% FabArray::ParallelCopy() 264 0.07703 0.1146 0.1584 6.92% FabArray::FillBoundary() 234 0.07911 0.1154 0.1507 6.58% FabArray::ParallelCopy_finish() 264 0.04631 0.08202 0.1241 5.42% sample::Coarsen() 18 0.1155 0.1162 0.1175 5.13% FillBoundary_finish() 264 0.01866 0.06279 0.1048 4.58% WarpX::EvolveB() 10 0.08665 0.08711 0.08813 3.85% FillBoundary_nowait() 264 0.08185 0.08403 0.08579 3.75% FabArray::LinComb() 114 0.04643 0.0482 0.04977 2.17% FlushFormatPlotfile::WriteToFile() 2 0.03636 0.0374 0.03921 1.71% WriteMultiLevelPlotfile() 2 0.03632 0.0372 0.03853 1.68% FabArray::FillBoundaryAndSync() 30 0.01997 0.02901 0.03832 1.67% VisMF::Write(FabArray) 2 0.03529 0.03585 0.03692 1.61% FabArray::ParallelCopy_nowait() 264 0.02993 0.03172 0.03351 1.46% WarpX::EvolveBLondon() 5 0.03062 0.03137 0.03171 1.39% ParticleContainer::Redistribute_impl() 1 0.0001824 0.01226 0.02487 1.09% ParticleCopyPlan::build 1 2.325e-05 0.01211 0.02471 1.08% ParticleCopyPlan::buildMPIStart 1 2.006e-05 0.01211 0.0247 1.08% ParticleCopyPlan::doHandShake 1 1.211e-05 0.0121 0.02469 1.08% FillBoundaryAndSync_finish() 30 0.003061 0.01124 0.01928 0.84% FillBoundaryAndSync_nowait() 30 0.01687 0.01772 0.01909 0.83% WarpX::DampPML() 5 0.0126 0.01287 0.01304 0.57% Other 739 0.01108 0.01429 0.01828 0.80% -------------------------------------------------------------------------------------------- BEGIN REGION WarpX::Evolve() -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- FabArray::setVal() 252 0.4413 0.4965 0.5495 24.00% amrex::Copy() 270 0.4088 0.4179 0.4258 18.60% WarpX::MacroscopicEvolveE() 5 0.3813 0.384 0.3895 17.02% PML::Exchange 126 0.1044 0.1171 0.1275 5.57% FabArray::ParallelCopy_finish() 252 0.03773 0.07342 0.1117 4.88% FillBoundary_finish() 252 0.01815 0.05887 0.09751 4.26% WarpX::EvolveB() 10 0.08665 0.08711 0.08813 3.85% FillBoundary_nowait() 252 0.07653 0.07862 0.08022 3.50% sample::Coarsen() 12 0.06973 0.07011 0.07092 3.10% FabArray::LinComb() 108 0.04376 0.04541 0.04678 2.04% WarpX::EvolveBLondon() 5 0.03062 0.03137 0.03171 1.39% FabArray::ParallelCopy_nowait() 252 0.02731 0.02876 0.03026 1.32% WarpX::OneStep_nosub() 5 0.02086 0.02093 0.02105 0.92% VisMF::Write(FabArray) 1 0.01779 0.01797 0.01834 0.80% WarpX::DampPML() 5 0.0126 0.01287 0.01304 0.57% WarpX::Evolve::step 5 0.004603 0.005871 0.007168 0.31% FabArray::ParallelCopy() 252 0.0007415 0.0007936 0.0009111 0.04% ablastr::utils::communication::ParallelCopy 252 0.0007529 0.0007799 0.0008284 0.04% WriteMultiLevelPlotfile() 1 0.0002082 0.0005632 0.0007852 0.03% ablastr::utils::communication::FillBoundary 252 0.0004583 0.0004857 0.0005243 0.02% MultiFab::Copy() 126 0.0004019 0.0004354 0.0004941 0.02% FlushFormatPlotfile::WriteToFile() 1 1.362e-05 9.893e-05 0.0003495 0.02% FabArray::FillBoundary() 222 0.0003079 0.0003248 0.0003368 0.01% Diagnostics::FilterComputePackFlush() 6 9.883e-05 0.0001027 0.0001069 0.00% FabArray::FillBoundaryAndSync() 30 4.028e-05 5.196e-05 6.424e-05 0.00% FillBoundaryAndSync_finish() 30 4.793e-05 5.576e-05 6.26e-05 0.00% FillBoundaryAndSync_nowait() 30 2.743e-05 3.471e-05 4.151e-05 0.00% WarpX::Evolve() 1 4.017e-06 4.591e-06 5.91e-06 0.00% REG::WarpX::Evolve() 1 2.184e-06 3.005e-06 4.599e-06 0.00% Other 670 0.002333 0.002623 0.003001 0.13% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- REG::WarpX::Evolve() 1 1.952 1.953 1.953 85.34% WarpX::Evolve() 1 1.952 1.953 1.953 85.34% WarpX::Evolve::step 5 1.849 1.849 1.849 80.79% WarpX::OneStep_nosub() 5 1.251 1.276 1.301 56.85% PML::Exchange 126 1.143 1.182 1.225 53.53% FabArray::setVal() 252 0.4413 0.4965 0.5495 24.00% amrex::Copy() 270 0.4088 0.4179 0.4258 18.60% WarpX::MacroscopicEvolveE() 5 0.3813 0.384 0.3895 17.02% Diagnostics::FilterComputePackFlush() 6 0.2267 0.227 0.2275 9.94% MultiFab::Copy() 126 0.2059 0.2121 0.2175 9.50% ablastr::utils::communication::FillBoundary 252 0.09515 0.1365 0.1776 7.76% ablastr::utils::communication::ParallelCopy 252 0.06785 0.1052 0.1452 6.34% FabArray::ParallelCopy() 252 0.06707 0.1044 0.1444 6.31% FabArray::FillBoundary() 222 0.07422 0.107 0.1388 6.06% FabArray::ParallelCopy_finish() 252 0.03773 0.07342 0.1117 4.88% FillBoundary_finish() 252 0.01815 0.05887 0.09751 4.26% WarpX::EvolveB() 10 0.08665 0.08711 0.08813 3.85% FillBoundary_nowait() 252 0.07748 0.07959 0.0812 3.55% sample::Coarsen() 12 0.06973 0.07011 0.07092 3.10% FabArray::LinComb() 108 0.04376 0.04541 0.04678 2.04% FabArray::FillBoundaryAndSync() 30 0.01997 0.02901 0.03832 1.67% FabArray::ParallelCopy_nowait() 252 0.02858 0.0302 0.03189 1.39% WarpX::EvolveBLondon() 5 0.03062 0.03137 0.03171 1.39% FlushFormatPlotfile::WriteToFile() 1 0.01811 0.01865 0.01942 0.85% FillBoundaryAndSync_finish() 30 0.003061 0.01124 0.01928 0.84% FillBoundaryAndSync_nowait() 30 0.01687 0.01772 0.01909 0.83% WriteMultiLevelPlotfile() 1 0.0181 0.01855 0.01907 0.83% VisMF::Write(FabArray) 1 0.01779 0.01797 0.01834 0.80% WarpX::DampPML() 5 0.0126 0.01287 0.01304 0.57% Other 670 0.009463 0.01221 0.01595 0.70% -------------------------------------------------------------------------------------------- END REGION WarpX::Evolve() Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [london_Rittweger_3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.dx(nvals = 3) :: [(prob_hi-prob_lo), /, nx] [TOP]::my_constants.dy(nvals = 3) :: [(prob_hi-prob_lo), /, ny] [TOP]::my_constants.obs(nvals = 1) :: [-400.e-9] [TOP]::plt(nvals = 1) :: [london_Rittweger_3d_plt] Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 4 5 B 7 B 11 B 8192 KiB 8192 KiB 8192 KiB main() 184 3302 B 3302 B 3303 B 3584 B 3584 B 3584 B WarpX::InitData() 52 2443 B 2450 B 2458 B 2560 B 2560 B 2560 B Unprofiled 76 0 B 0 B 0 B 256 B 256 B 256 B -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------- WarpX::InitData() 280 130 MiB 130 MiB 130 MiB 135 MiB 135 MiB 135 MiB PML::Exchange 2112 4663 KiB 4853 KiB 5044 KiB 9974 KiB 9974 KiB 9974 KiB FillBoundary_nowait() 1932 15 KiB 23 KiB 32 KiB 601 KiB 606 KiB 613 KiB FabArray::ParallelCopy_nowait() 2112 851 B 1087 B 1347 B 76 KiB 76 KiB 76 KiB --------------------------------------------------------------------------------------------------------------- AMReX (26.08-18-g057940244648) finalized