Initializing AMReX (26.08-26-g2cf4fbcde02a)... MPI initialized with 4 MPI processes MPI initialized with thread support level 3 AMReX (26.08-26-g2cf4fbcde02a) initialized London class is constructed WarpX (4fa5cde3d7bd) _____ __ .__ / _ \________/ |_ ____ _____ |__| ______ / /_\ \_ __ \ __\/ __ \ / \| |/ ___/ / | \ | \/| | \ ___/| Y Y \ |\___ \ \____|__ /__| |__| \___ >__|_| /__/____ > \/ \/ \/ \/ Level 0: dt = 4.333124703e-18 ; dx = 1e-08 ; dy = 1e-08 ; dz = 1e-08 --- INFO : we are in init data of macro calling london Grids Summary: Level 0 8 grids 2097152 cells 100 % of domain smallest grid: 64 x 64 x 64 biggest grid: 64 x 64 x 64 ------------------------------------------------------------------------------- --------------------------- MAIN EM PIC PARAMETERS ---------------------------- ------------------------------------------------------------------------------- Precision: | DOUBLE Particle precision: | DOUBLE Geometry: | 3D (XYZ) Operation mode: | Electromagnetic | - macroscopic | - Lax-Wendroff algorithm ------------------------------------------------------------------------------- Current Deposition: | Esirkepov Particle Pusher: | Boris Charge Deposition: | standard Field Gathering: | energy-conserving Particle Shape Factor:| 0 ------------------------------------------------------------------------------- Maxwell Solver: | Yee ------------------------------------------------------------------------------- For full input parameters, see the file: warpx_used_inputs --- INFO : Writing plotfile diags/plt000000 STEP 1 starts ... evolve london J using E in evolve london j evolve london J using E Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [london_Rittweger_3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.dx(nvals = 3) :: [(prob_hi-prob_lo), /, nx] [TOP]::my_constants.dy(nvals = 3) :: [(prob_hi-prob_lo), /, ny] [TOP]::my_constants.obs(nvals = 1) :: [-400.e-9] [TOP]::plt(nvals = 1) :: [london_Rittweger_3d_plt] **** WARNINGS ****************************************************************** * GLOBAL warning list after [ FIRST STEP ] * * --> [! ] [Species] [raised 4 times] * particles.nspecies is ignored. Just use particles.species_names please. * @ Raised by: ALL * ******************************************************************************** STEP 1 ends. TIME = 4.333124703e-18 DT = 4.333124703e-18 Evolve time = 0.415539264 s; This step = 0.415539264 s; Avg. per step = 0.415539264 s STEP 2 starts ... in evolve london j evolve london J using E STEP 2 ends. TIME = 8.666249407e-18 DT = 4.333124703e-18 Evolve time = 0.826573939 s; This step = 0.411034675 s; Avg. per step = 0.4132869695 s STEP 3 starts ... in evolve london j evolve london J using E STEP 3 ends. TIME = 1.299937411e-17 DT = 4.333124703e-18 Evolve time = 1.147625409 s; This step = 0.32105147 s; Avg. per step = 0.382541803 s STEP 4 starts ... in evolve london j evolve london J using E STEP 4 ends. TIME = 1.733249881e-17 DT = 4.333124703e-18 Evolve time = 1.466359774 s; This step = 0.318734365 s; Avg. per step = 0.3665899435 s STEP 5 starts ... in evolve london j evolve london J using E --- INFO : Writing plotfile diags/plt000005 STEP 5 ends. TIME = 2.166562352e-17 DT = 4.333124703e-18 Evolve time = 1.98221303 s; This step = 0.515853256 s; Avg. per step = 0.396442606 s Total Time : 2.425555852 TinyProfiler total time across processes [min...avg...max]: 2.427 ... 2.431 ... 2.435 -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- FabArray::setVal() 291 0.4871 0.5676 0.6286 25.82% WarpX::MacroscopicEvolveE() 5 0.3832 0.4114 0.49 20.12% amrex::Copy() 282 0.4004 0.4169 0.4326 17.77% FabArray::ParallelCopy_finish() 264 0.0411 0.1486 0.2166 8.90% FillBoundary_finish() 264 0.05022 0.1119 0.1749 7.18% WarpX::InitData() 1 0.1198 0.1307 0.1427 5.86% PML::Exchange 132 0.1078 0.1206 0.1348 5.54% sample::Coarsen() 18 0.116 0.1169 0.1177 4.83% WarpX::EvolveB() 10 0.08953 0.09334 0.1018 4.18% FillBoundary_nowait() 264 0.08015 0.08323 0.09074 3.73% FabArray::LinComb() 114 0.04607 0.04723 0.04978 2.04% VisMF::Write(FabArray) 2 0.03431 0.03477 0.03582 1.47% WarpX::EvolveBLondon() 5 0.03098 0.03257 0.03516 1.44% ParticleCopyPlan::doHandShake 1 1.747e-05 0.01609 0.03137 1.29% FabArray::ParallelCopy_nowait() 264 0.02649 0.02817 0.02933 1.20% WarpX::OneStep_nosub() 5 0.02091 0.02181 0.02351 0.97% WarpX::Evolve::step 5 0.004793 0.01267 0.02048 0.84% WarpX::DampPML() 5 0.01146 0.01302 0.01378 0.57% DistributionMapping::LeastUsedCPUs() 1 1.179e-05 0.004 0.008029 0.33% FlushFormatPlotfile::WriteToFile() 2 3.227e-05 0.0006311 0.002416 0.10% WriteMultiLevelPlotfile() 2 0.0005615 0.001364 0.00191 0.08% main() 1 0.0006668 0.001274 0.001609 0.07% FabArray::ParallelCopy() 264 0.0007762 0.0008034 0.0008307 0.03% ablastr::utils::communication::ParallelCopy 264 0.0007444 0.0007949 0.0008294 0.03% ablastr::utils::communication::FillBoundary 264 0.0004602 0.0005101 0.0005706 0.02% MultiFab::Copy() 132 0.0004217 0.000465 0.000494 0.02% FabArray::FillBoundary() 234 0.000322 0.0003537 0.0003986 0.02% Diagnostics::FilterComputePackFlush() 7 0.0001455 0.0001554 0.0001814 0.01% FillBoundaryAndSync_finish() 30 4.974e-05 6.203e-05 8.496e-05 0.00% FabArray::FillBoundaryAndSync() 30 5.058e-05 5.615e-05 6.573e-05 0.00% ablastr::utils::communication::OverrideSync 30 4.101e-05 4.518e-05 5.155e-05 0.00% FillBoundaryAndSync_nowait() 30 3.554e-05 4.033e-05 4.665e-05 0.00% ParticleContainer::Redistribute_impl() 1 4.283e-06 5.978e-06 9.67e-06 0.00% ParticleCopyPlan::buildMPIStart 1 7.599e-06 8.315e-06 9.362e-06 0.00% ParticleCopyPlan::build 1 2.958e-06 4.322e-06 6.623e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.32e-06 4.946e-06 5.316e-06 0.00% WarpX::Evolve() 1 3.982e-06 4.38e-06 4.79e-06 0.00% REG::WarpX::Evolve() 1 2.338e-06 2.771e-06 3.162e-06 0.00% AmrMesh::MakeDistributionMap() 1 1.942e-06 2.289e-06 2.44e-06 0.00% Other 706 0.003252 0.003612 0.00432 0.18% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- main() 1 2.418 2.422 2.426 99.62% REG::WarpX::Evolve() 1 2.079 2.08 2.081 85.46% WarpX::Evolve() 1 2.079 2.08 2.081 85.46% WarpX::Evolve::step 5 1.98 1.981 1.982 81.42% WarpX::OneStep_nosub() 5 1.409 1.409 1.41 57.91% PML::Exchange 132 1.234 1.279 1.383 56.81% FabArray::setVal() 291 0.4871 0.5676 0.6286 25.82% WarpX::MacroscopicEvolveE() 5 0.3832 0.4114 0.49 20.12% amrex::Copy() 282 0.4004 0.4169 0.4326 17.77% Diagnostics::FilterComputePackFlush() 7 0.3521 0.3559 0.3602 14.79% WarpX::InitData() 1 0.3359 0.3403 0.3444 14.14% ablastr::utils::communication::FillBoundary 264 0.1342 0.1938 0.2544 10.45% ablastr::utils::communication::ParallelCopy 264 0.07252 0.1802 0.2494 10.24% FabArray::ParallelCopy() 264 0.07174 0.1794 0.2486 10.21% MultiFab::Copy() 132 0.2039 0.2106 0.2211 9.08% FabArray::ParallelCopy_finish() 264 0.0411 0.1486 0.2166 8.90% FillBoundary_finish() 264 0.05022 0.1119 0.1749 7.18% FabArray::FillBoundaryAndSync() 30 0.03042 0.08642 0.142 5.83% FillBoundaryAndSync_finish() 30 0.01021 0.06819 0.1249 5.13% sample::Coarsen() 18 0.116 0.1169 0.1177 4.83% FabArray::FillBoundary() 234 0.1028 0.1069 0.1123 4.61% WarpX::EvolveB() 10 0.08953 0.09334 0.1018 4.18% FillBoundary_nowait() 264 0.08146 0.08465 0.09248 3.80% FabArray::LinComb() 114 0.04607 0.04723 0.04978 2.04% FlushFormatPlotfile::WriteToFile() 2 0.03513 0.03682 0.04037 1.66% WriteMultiLevelPlotfile() 2 0.0351 0.03619 0.03795 1.56% VisMF::Write(FabArray) 2 0.03431 0.03477 0.03582 1.47% WarpX::EvolveBLondon() 5 0.03098 0.03257 0.03516 1.44% ParticleContainer::Redistribute_impl() 1 0.0001726 0.01625 0.03154 1.30% ParticleCopyPlan::build 1 2.856e-05 0.0161 0.03139 1.29% ParticleCopyPlan::buildMPIStart 1 2.507e-05 0.0161 0.03138 1.29% ParticleCopyPlan::doHandShake 1 1.747e-05 0.01609 0.03137 1.29% FabArray::ParallelCopy_nowait() 264 0.0282 0.02999 0.03113 1.28% FillBoundaryAndSync_nowait() 30 0.01671 0.01817 0.02138 0.88% WarpX::DampPML() 5 0.01146 0.01302 0.01378 0.57% AmrMesh::MakeDistributionMap() 1 2.016e-05 0.004011 0.008039 0.33% DistributionMapping::SFCProcessorMapDoIt() 1 1.822e-05 0.004009 0.008036 0.33% DistributionMapping::LeastUsedCPUs() 1 1.179e-05 0.004 0.008029 0.33% ablastr::utils::communication::OverrideSync 30 0.002604 0.003946 0.007126 0.29% Other 706 0.009389 0.01278 0.02042 0.84% -------------------------------------------------------------------------------------------- BEGIN REGION WarpX::Evolve() -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- FabArray::setVal() 252 0.4156 0.4867 0.5513 22.64% WarpX::MacroscopicEvolveE() 5 0.3832 0.4114 0.49 20.12% amrex::Copy() 270 0.3813 0.3981 0.4132 16.97% FabArray::ParallelCopy_finish() 252 0.03348 0.1415 0.204 8.38% FillBoundary_finish() 252 0.04683 0.11 0.1743 7.16% PML::Exchange 126 0.1024 0.1152 0.1283 5.27% WarpX::EvolveB() 10 0.08953 0.09334 0.1018 4.18% FillBoundary_nowait() 252 0.07597 0.07873 0.086 3.53% sample::Coarsen() 12 0.0691 0.0695 0.0704 2.89% FabArray::LinComb() 108 0.04293 0.04434 0.0467 1.92% WarpX::EvolveBLondon() 5 0.03098 0.03257 0.03516 1.44% FabArray::ParallelCopy_nowait() 252 0.02514 0.02682 0.02798 1.15% WarpX::OneStep_nosub() 5 0.02091 0.02181 0.02351 0.97% WarpX::Evolve::step 5 0.004793 0.01267 0.02048 0.84% VisMF::Write(FabArray) 1 0.01716 0.01755 0.01804 0.74% WarpX::DampPML() 5 0.01146 0.01302 0.01378 0.57% FlushFormatPlotfile::WriteToFile() 1 1.426e-05 0.0005205 0.002037 0.08% FabArray::ParallelCopy() 252 0.0007405 0.0007733 0.0008065 0.03% ablastr::utils::communication::ParallelCopy 252 0.0007221 0.0007695 0.0008037 0.03% WriteMultiLevelPlotfile() 1 0.0002069 0.0005642 0.0007716 0.03% ablastr::utils::communication::FillBoundary 252 0.0004422 0.0004873 0.0005419 0.02% MultiFab::Copy() 126 0.0004065 0.0004508 0.0004799 0.02% FabArray::FillBoundary() 222 0.00031 0.0003383 0.0003806 0.02% Diagnostics::FilterComputePackFlush() 6 9.831e-05 0.000103 0.0001114 0.00% FillBoundaryAndSync_finish() 30 4.974e-05 6.203e-05 8.496e-05 0.00% FabArray::FillBoundaryAndSync() 30 5.058e-05 5.615e-05 6.573e-05 0.00% ablastr::utils::communication::OverrideSync 30 4.101e-05 4.518e-05 5.155e-05 0.00% FillBoundaryAndSync_nowait() 30 3.554e-05 4.033e-05 4.665e-05 0.00% WarpX::Evolve() 1 3.982e-06 4.38e-06 4.79e-06 0.00% REG::WarpX::Evolve() 1 2.338e-06 2.771e-06 3.162e-06 0.00% Other 640 0.002333 0.002642 0.003216 0.13% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- REG::WarpX::Evolve() 1 2.079 2.08 2.081 85.46% WarpX::Evolve() 1 2.079 2.08 2.081 85.46% WarpX::Evolve::step 5 1.98 1.981 1.982 81.42% WarpX::OneStep_nosub() 5 1.409 1.409 1.41 57.91% PML::Exchange 126 1.172 1.216 1.317 54.09% FabArray::setVal() 252 0.4156 0.4867 0.5513 22.64% WarpX::MacroscopicEvolveE() 5 0.3832 0.4114 0.49 20.12% amrex::Copy() 270 0.3813 0.3981 0.4132 16.97% ablastr::utils::communication::FillBoundary 252 0.1256 0.187 0.2493 10.24% ablastr::utils::communication::ParallelCopy 252 0.06311 0.1712 0.2349 9.65% FabArray::ParallelCopy() 252 0.06236 0.1705 0.2342 9.62% Diagnostics::FilterComputePackFlush() 6 0.22 0.2203 0.2209 9.07% MultiFab::Copy() 126 0.1954 0.2015 0.2114 8.68% FabArray::ParallelCopy_finish() 252 0.03348 0.1415 0.204 8.38% FillBoundary_finish() 252 0.04683 0.11 0.1743 7.16% FabArray::FillBoundaryAndSync() 30 0.03042 0.08642 0.142 5.83% FillBoundaryAndSync_finish() 30 0.01021 0.06819 0.1249 5.13% FabArray::FillBoundary() 222 0.09474 0.1 0.1071 4.40% WarpX::EvolveB() 10 0.08953 0.09334 0.1018 4.18% FillBoundary_nowait() 252 0.07692 0.0798 0.08737 3.59% sample::Coarsen() 12 0.0691 0.0695 0.0704 2.89% FabArray::LinComb() 108 0.04293 0.04434 0.0467 1.92% WarpX::EvolveBLondon() 5 0.03098 0.03257 0.03516 1.44% FabArray::ParallelCopy_nowait() 252 0.02642 0.02821 0.02937 1.21% FillBoundaryAndSync_nowait() 30 0.01671 0.01817 0.02138 0.88% FlushFormatPlotfile::WriteToFile() 1 0.01772 0.01866 0.02091 0.86% WriteMultiLevelPlotfile() 1 0.01771 0.01814 0.01887 0.78% VisMF::Write(FabArray) 1 0.01716 0.01755 0.01804 0.74% WarpX::DampPML() 5 0.01146 0.01302 0.01378 0.57% ablastr::utils::communication::OverrideSync 30 0.002604 0.003946 0.007126 0.29% Other 640 0.007728 0.01107 0.01857 0.76% -------------------------------------------------------------------------------------------- END REGION WarpX::Evolve() Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [london_Rittweger_3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.dx(nvals = 3) :: [(prob_hi-prob_lo), /, nx] [TOP]::my_constants.dy(nvals = 3) :: [(prob_hi-prob_lo), /, ny] [TOP]::my_constants.obs(nvals = 1) :: [-400.e-9] [TOP]::plt(nvals = 1) :: [london_Rittweger_3d_plt] Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 4 5 B 7 B 10 B 8192 KiB 8192 KiB 8192 KiB main() 184 3298 B 3304 B 3310 B 3584 B 3584 B 3584 B WarpX::InitData() 52 2438 B 2446 B 2454 B 2560 B 2560 B 2560 B Unprofiled 76 0 B 0 B 0 B 256 B 256 B 256 B -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------- WarpX::InitData() 280 129 MiB 129 MiB 129 MiB 135 MiB 135 MiB 135 MiB PML::Exchange 2112 4551 KiB 4721 KiB 5085 KiB 9974 KiB 9974 KiB 9974 KiB FillBoundary_nowait() 1932 21 KiB 34 KiB 48 KiB 601 KiB 606 KiB 613 KiB FabArray::ParallelCopy_nowait() 2112 851 B 1436 B 2274 B 76 KiB 76 KiB 76 KiB --------------------------------------------------------------------------------------------------------------- AMReX (26.08-26-g2cf4fbcde02a) finalized