Initializing AMReX (26.09-3-gf3531b15b7f4)... MPI initialized with 4 MPI processes MPI initialized with thread support level 3 AMReX (26.09-3-gf3531b15b7f4) initialized London class is constructed WarpX (4fa5cde3d7bd) _____ __ .__ / _ \________/ |_ ____ _____ |__| ______ / /_\ \_ __ \ __\/ __ \ / \| |/ ___/ / | \ | \/| | \ ___/| Y Y \ |\___ \ \____|__ /__| |__| \___ >__|_| /__/____ > \/ \/ \/ \/ Level 0: dt = 4.333124703e-18 ; dx = 1e-08 ; dy = 1e-08 ; dz = 1e-08 --- INFO : we are in init data of macro calling london Grids Summary: Level 0 8 grids 2097152 cells 100 % of domain smallest grid: 64 x 64 x 64 biggest grid: 64 x 64 x 64 ------------------------------------------------------------------------------- --------------------------- MAIN EM PIC PARAMETERS ---------------------------- ------------------------------------------------------------------------------- Precision: | DOUBLE Particle precision: | DOUBLE Geometry: | 3D (XYZ) Operation mode: | Electromagnetic | - macroscopic | - Lax-Wendroff algorithm ------------------------------------------------------------------------------- Current Deposition: | Esirkepov Particle Pusher: | Boris Charge Deposition: | standard Field Gathering: | energy-conserving Particle Shape Factor:| 0 ------------------------------------------------------------------------------- Maxwell Solver: | Yee ------------------------------------------------------------------------------- For full input parameters, see the file: warpx_used_inputs --- INFO : Writing plotfile diags/plt000000 STEP 1 starts ... evolve london J using E in evolve london j evolve london J using E Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [london_Rittweger_3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.dx(nvals = 3) :: [(prob_hi-prob_lo), /, nx] [TOP]::my_constants.dy(nvals = 3) :: [(prob_hi-prob_lo), /, ny] [TOP]::my_constants.obs(nvals = 1) :: [-400.e-9] [TOP]::plt(nvals = 1) :: [london_Rittweger_3d_plt] **** WARNINGS ****************************************************************** * GLOBAL warning list after [ FIRST STEP ] * * --> [! ] [Species] [raised 4 times] * particles.nspecies is ignored. Just use particles.species_names please. * @ Raised by: ALL * ******************************************************************************** STEP 1 ends. TIME = 4.333124703e-18 DT = 4.333124703e-18 Evolve time = 0.353980996 s; This step = 0.353980996 s; Avg. per step = 0.353980996 s STEP 2 starts ... in evolve london j evolve london J using E STEP 2 ends. TIME = 8.666249407e-18 DT = 4.333124703e-18 Evolve time = 0.675782608 s; This step = 0.321801612 s; Avg. per step = 0.337891304 s STEP 3 starts ... in evolve london j evolve london J using E STEP 3 ends. TIME = 1.299937411e-17 DT = 4.333124703e-18 Evolve time = 0.99593505 s; This step = 0.320152442 s; Avg. per step = 0.33197835 s STEP 4 starts ... in evolve london j evolve london J using E STEP 4 ends. TIME = 1.733249881e-17 DT = 4.333124703e-18 Evolve time = 1.326937622 s; This step = 0.331002572 s; Avg. per step = 0.3317344055 s STEP 5 starts ... in evolve london j evolve london J using E --- INFO : Writing plotfile diags/plt000005 STEP 5 ends. TIME = 2.166562352e-17 DT = 4.333124703e-18 Evolve time = 1.844659089 s; This step = 0.517721467 s; Avg. per step = 0.3689318178 s Total Time : 2.267036534 TinyProfiler total time across processes [min...avg...max]: 2.271 ... 2.273 ... 2.275 -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- FabArray::setVal() 291 0.5466 0.5734 0.6095 26.79% amrex::Copy() 282 0.4317 0.44 0.4457 19.59% WarpX::MacroscopicEvolveE() 5 0.3807 0.3827 0.3864 16.98% WarpX::InitData() 1 0.1223 0.1268 0.1308 5.75% PML::Exchange 132 0.1103 0.1177 0.1275 5.61% sample::Coarsen() 18 0.1215 0.1222 0.1232 5.42% FabArray::ParallelCopy_finish() 264 0.06805 0.08068 0.09542 4.19% WarpX::EvolveB() 10 0.08627 0.08724 0.08903 3.91% FillBoundary_finish() 264 0.01557 0.05075 0.08554 3.76% FillBoundary_nowait() 264 0.07964 0.08266 0.0853 3.75% FabArray::LinComb() 114 0.04836 0.04983 0.05107 2.24% VisMF::Write(FabArray) 2 0.03354 0.03429 0.03545 1.56% WarpX::EvolveBLondon() 5 0.03115 0.03142 0.03203 1.41% FabArray::ParallelCopy_nowait() 264 0.0299 0.03029 0.0312 1.37% WarpX::OneStep_nosub() 5 0.0199 0.02009 0.02031 0.89% WarpX::DampPML() 5 0.01286 0.01296 0.01305 0.57% ParticleCopyPlan::doHandShake 1 2.098e-05 0.004088 0.008228 0.36% WarpX::Evolve::step 5 0.004457 0.004991 0.005476 0.24% WriteMultiLevelPlotfile() 2 0.0007735 0.001551 0.002551 0.11% main() 1 0.0007372 0.001266 0.001705 0.07% FlushFormatPlotfile::WriteToFile() 2 4.11e-05 0.0003871 0.001417 0.06% FabArray::ParallelCopy() 264 0.0007695 0.000813 0.0008527 0.04% ablastr::utils::communication::ParallelCopy 264 0.0007881 0.0008175 0.0008508 0.04% ablastr::utils::communication::FillBoundary 264 0.0004174 0.0004814 0.0005304 0.02% MultiFab::Copy() 132 0.0004237 0.0004381 0.0004558 0.02% FabArray::FillBoundary() 234 0.000306 0.0003312 0.0003537 0.02% Diagnostics::FilterComputePackFlush() 7 0.0001553 0.0002066 0.0003432 0.02% FabArray::FillBoundaryAndSync() 30 4.326e-05 5.346e-05 6.34e-05 0.00% FillBoundaryAndSync_finish() 30 5.287e-05 5.881e-05 6.252e-05 0.00% FillBoundaryAndSync_nowait() 30 3.421e-05 3.904e-05 5.212e-05 0.00% AmrMesh::MakeDistributionMap() 1 1.904e-06 3.955e-06 9.886e-06 0.00% ParticleCopyPlan::build 1 2.742e-06 4.811e-06 9.07e-06 0.00% ParticleCopyPlan::buildMPIStart 1 7.314e-06 8.046e-06 8.966e-06 0.00% ParticleContainer::Redistribute_impl() 1 4.658e-06 6.544e-06 8.326e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.686e-06 4.466e-06 6.54e-06 0.00% WarpX::Evolve() 1 3.932e-06 4.375e-06 5.35e-06 0.00% REG::WarpX::Evolve() 1 1.871e-06 2.8e-06 3.343e-06 0.00% Other 737 0.00334 0.006108 0.009014 0.40% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- main() 1 2.262 2.265 2.267 99.64% REG::WarpX::Evolve() 1 1.946 1.946 1.947 85.56% WarpX::Evolve() 1 1.946 1.946 1.947 85.56% WarpX::Evolve::step 5 1.844 1.844 1.845 81.08% WarpX::OneStep_nosub() 5 1.272 1.283 1.294 56.85% PML::Exchange 132 1.214 1.249 1.285 56.46% FabArray::setVal() 291 0.5466 0.5734 0.6095 26.79% amrex::Copy() 282 0.4317 0.44 0.4457 19.59% WarpX::MacroscopicEvolveE() 5 0.3807 0.3827 0.3864 16.98% Diagnostics::FilterComputePackFlush() 7 0.3571 0.3607 0.3645 16.02% WarpX::InitData() 1 0.3144 0.317 0.3191 14.02% MultiFab::Copy() 132 0.2173 0.2206 0.2232 9.81% ablastr::utils::communication::FillBoundary 264 0.09504 0.1333 0.1703 7.49% FabArray::FillBoundary() 234 0.07434 0.1054 0.1354 5.95% ablastr::utils::communication::ParallelCopy 264 0.1014 0.1144 0.1289 5.67% FabArray::ParallelCopy() 264 0.1006 0.1136 0.128 5.63% sample::Coarsen() 18 0.1215 0.1222 0.1232 5.42% FabArray::ParallelCopy_finish() 264 0.06805 0.08068 0.09542 4.19% WarpX::EvolveB() 10 0.08627 0.08724 0.08903 3.91% FillBoundary_nowait() 264 0.08093 0.08402 0.0867 3.81% FillBoundary_finish() 264 0.01557 0.05075 0.08554 3.76% FabArray::LinComb() 114 0.04836 0.04983 0.05107 2.24% FlushFormatPlotfile::WriteToFile() 2 0.03538 0.03628 0.03786 1.66% WriteMultiLevelPlotfile() 2 0.03534 0.03589 0.03645 1.60% VisMF::Write(FabArray) 2 0.03354 0.03429 0.03545 1.56% FabArray::FillBoundaryAndSync() 30 0.02022 0.0274 0.0345 1.52% FabArray::ParallelCopy_nowait() 264 0.03169 0.03214 0.03315 1.46% WarpX::EvolveBLondon() 5 0.03115 0.03142 0.03203 1.41% FillBoundaryAndSync_nowait() 30 0.01679 0.01804 0.01913 0.84% FillBoundaryAndSync_finish() 30 0.002376 0.009312 0.01618 0.71% WarpX::DampPML() 5 0.01286 0.01296 0.01305 0.57% ParticleContainer::Redistribute_impl() 1 0.0001745 0.004249 0.008391 0.37% ParticleCopyPlan::build 1 3.788e-05 0.004101 0.008242 0.36% ParticleCopyPlan::buildMPIStart 1 2.83e-05 0.004096 0.008237 0.36% ParticleCopyPlan::doHandShake 1 2.098e-05 0.004088 0.008228 0.36% AmrMesh::MakeDistributionMap() 1 2.823e-05 0.002527 0.005023 0.22% DistributionMapping::SFCProcessorMapDoIt() 1 1.834e-05 0.002523 0.005021 0.22% Other 737 0.01084 0.01495 0.01974 0.87% -------------------------------------------------------------------------------------------- BEGIN REGION WarpX::Evolve() -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- FabArray::setVal() 252 0.4751 0.4994 0.5336 23.45% amrex::Copy() 270 0.4139 0.4213 0.4266 18.75% WarpX::MacroscopicEvolveE() 5 0.3807 0.3827 0.3864 16.98% PML::Exchange 126 0.1058 0.113 0.1224 5.38% FabArray::ParallelCopy_finish() 252 0.0558 0.07452 0.09437 4.15% WarpX::EvolveB() 10 0.08627 0.08724 0.08903 3.91% FillBoundary_finish() 252 0.01503 0.04885 0.08231 3.62% FillBoundary_nowait() 252 0.07547 0.07834 0.08087 3.55% sample::Coarsen() 12 0.07164 0.07213 0.07341 3.23% FabArray::LinComb() 108 0.04533 0.04675 0.04773 2.10% WarpX::EvolveBLondon() 5 0.03115 0.03142 0.03203 1.41% FabArray::ParallelCopy_nowait() 252 0.02856 0.02891 0.02977 1.31% WarpX::OneStep_nosub() 5 0.0199 0.02009 0.02031 0.89% VisMF::Write(FabArray) 1 0.01694 0.01714 0.01761 0.77% WarpX::DampPML() 5 0.01286 0.01296 0.01305 0.57% WarpX::Evolve::step 5 0.004457 0.004991 0.005476 0.24% FlushFormatPlotfile::WriteToFile() 1 1.32e-05 0.0002768 0.001062 0.05% WriteMultiLevelPlotfile() 1 1.559e-05 0.0007232 0.001042 0.05% ablastr::utils::communication::ParallelCopy 252 0.0007651 0.0007932 0.0008277 0.04% FabArray::ParallelCopy() 252 0.0007445 0.0007874 0.0008232 0.04% ablastr::utils::communication::FillBoundary 252 0.0003981 0.00046 0.0005066 0.02% MultiFab::Copy() 126 0.0004101 0.0004256 0.0004428 0.02% FabArray::FillBoundary() 222 0.0002907 0.000314 0.0003382 0.01% Diagnostics::FilterComputePackFlush() 6 9.912e-05 0.0001526 0.0002908 0.01% FabArray::FillBoundaryAndSync() 30 4.326e-05 5.346e-05 6.34e-05 0.00% FillBoundaryAndSync_finish() 30 5.287e-05 5.881e-05 6.252e-05 0.00% FillBoundaryAndSync_nowait() 30 3.421e-05 3.904e-05 5.212e-05 0.00% WarpX::Evolve() 1 3.932e-06 4.375e-06 5.35e-06 0.00% REG::WarpX::Evolve() 1 1.871e-06 2.8e-06 3.343e-06 0.00% Other 670 0.002467 0.002652 0.0029 0.13% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- REG::WarpX::Evolve() 1 1.946 1.946 1.947 85.56% WarpX::Evolve() 1 1.946 1.946 1.947 85.56% WarpX::Evolve::step 5 1.844 1.844 1.845 81.08% WarpX::OneStep_nosub() 5 1.272 1.283 1.294 56.85% PML::Exchange 126 1.155 1.187 1.218 53.54% FabArray::setVal() 252 0.4751 0.4994 0.5336 23.45% amrex::Copy() 270 0.4139 0.4213 0.4266 18.75% WarpX::MacroscopicEvolveE() 5 0.3807 0.3827 0.3864 16.98% Diagnostics::FilterComputePackFlush() 6 0.224 0.2245 0.2249 9.89% MultiFab::Copy() 126 0.2086 0.211 0.2123 9.33% ablastr::utils::communication::FillBoundary 252 0.08997 0.1267 0.1622 7.13% FabArray::FillBoundary() 222 0.06928 0.09887 0.1273 5.60% ablastr::utils::communication::ParallelCopy 252 0.08739 0.1064 0.126 5.54% FabArray::ParallelCopy() 252 0.08663 0.1057 0.1252 5.50% FabArray::ParallelCopy_finish() 252 0.0558 0.07452 0.09437 4.15% WarpX::EvolveB() 10 0.08627 0.08724 0.08903 3.91% FillBoundary_finish() 252 0.01503 0.04885 0.08231 3.62% FillBoundary_nowait() 252 0.07644 0.07936 0.08193 3.60% sample::Coarsen() 12 0.07164 0.07213 0.07341 3.23% FabArray::LinComb() 108 0.04533 0.04675 0.04773 2.10% FabArray::FillBoundaryAndSync() 30 0.02022 0.0274 0.0345 1.52% WarpX::EvolveBLondon() 5 0.03115 0.03142 0.03203 1.41% FabArray::ParallelCopy_nowait() 252 0.03 0.03034 0.03126 1.37% FillBoundaryAndSync_nowait() 30 0.01679 0.01804 0.01913 0.84% FlushFormatPlotfile::WriteToFile() 1 0.0178 0.01817 0.01879 0.83% WriteMultiLevelPlotfile() 1 0.01773 0.01789 0.01808 0.79% VisMF::Write(FabArray) 1 0.01694 0.01714 0.01761 0.77% FillBoundaryAndSync_finish() 30 0.002376 0.009312 0.01618 0.71% WarpX::DampPML() 5 0.01286 0.01296 0.01305 0.57% Other 670 0.009261 0.01077 0.01287 0.57% -------------------------------------------------------------------------------------------- END REGION WarpX::Evolve() Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [london_Rittweger_3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.dx(nvals = 3) :: [(prob_hi-prob_lo), /, nx] [TOP]::my_constants.dy(nvals = 3) :: [(prob_hi-prob_lo), /, ny] [TOP]::my_constants.obs(nvals = 1) :: [-400.e-9] [TOP]::plt(nvals = 1) :: [london_Rittweger_3d_plt] Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 4 4 B 7 B 10 B 8192 KiB 8192 KiB 8192 KiB main() 184 3303 B 3306 B 3310 B 3584 B 3584 B 3584 B WarpX::InitData() 52 2458 B 2461 B 2465 B 2560 B 2560 B 2560 B Unprofiled 76 0 B 0 B 0 B 256 B 256 B 256 B -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------- WarpX::InitData() 280 130 MiB 130 MiB 130 MiB 135 MiB 135 MiB 135 MiB PML::Exchange 2112 4793 KiB 4934 KiB 5053 KiB 9974 KiB 9974 KiB 9974 KiB FillBoundary_nowait() 1932 14 KiB 21 KiB 28 KiB 601 KiB 606 KiB 613 KiB FabArray::ParallelCopy_nowait() 2112 1015 B 1111 B 1215 B 76 KiB 76 KiB 76 KiB --------------------------------------------------------------------------------------------------------------- AMReX (26.09-3-gf3531b15b7f4) finalized