Initializing AMReX (26.09-11-gae079342654b)... MPI initialized with 4 MPI processes MPI initialized with thread support level 3 AMReX (26.09-11-gae079342654b) initialized London class is constructed WarpX (4fa5cde3d7bd) _____ __ .__ / _ \________/ |_ ____ _____ |__| ______ / /_\ \_ __ \ __\/ __ \ / \| |/ ___/ / | \ | \/| | \ ___/| Y Y \ |\___ \ \____|__ /__| |__| \___ >__|_| /__/____ > \/ \/ \/ \/ Level 0: dt = 4.333124703e-18 ; dx = 1e-08 ; dy = 1e-08 ; dz = 1e-08 --- INFO : we are in init data of macro calling london Grids Summary: Level 0 8 grids 2097152 cells 100 % of domain smallest grid: 64 x 64 x 64 biggest grid: 64 x 64 x 64 ------------------------------------------------------------------------------- --------------------------- MAIN EM PIC PARAMETERS ---------------------------- ------------------------------------------------------------------------------- Precision: | DOUBLE Particle precision: | DOUBLE Geometry: | 3D (XYZ) Operation mode: | Electromagnetic | - macroscopic | - Lax-Wendroff algorithm ------------------------------------------------------------------------------- Current Deposition: | Esirkepov Particle Pusher: | Boris Charge Deposition: | standard Field Gathering: | energy-conserving Particle Shape Factor:| 0 ------------------------------------------------------------------------------- Maxwell Solver: | Yee ------------------------------------------------------------------------------- For full input parameters, see the file: warpx_used_inputs --- INFO : Writing plotfile diags/plt000000 STEP 1 starts ... evolve london J using E in evolve london j evolve london J using E Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [london_Rittweger_3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.dx(nvals = 3) :: [(prob_hi-prob_lo), /, nx] [TOP]::my_constants.dy(nvals = 3) :: [(prob_hi-prob_lo), /, ny] [TOP]::my_constants.obs(nvals = 1) :: [-400.e-9] [TOP]::plt(nvals = 1) :: [london_Rittweger_3d_plt] **** WARNINGS ****************************************************************** * GLOBAL warning list after [ FIRST STEP ] * * --> [! ] [Species] [raised 4 times] * particles.nspecies is ignored. Just use particles.species_names please. * @ Raised by: ALL * ******************************************************************************** STEP 1 ends. TIME = 4.333124703e-18 DT = 4.333124703e-18 Evolve time = 0.351998222 s; This step = 0.351998222 s; Avg. per step = 0.351998222 s STEP 2 starts ... in evolve london j evolve london J using E STEP 2 ends. TIME = 8.666249407e-18 DT = 4.333124703e-18 Evolve time = 0.67784341 s; This step = 0.325845188 s; Avg. per step = 0.338921705 s STEP 3 starts ... in evolve london j evolve london J using E STEP 3 ends. TIME = 1.299937411e-17 DT = 4.333124703e-18 Evolve time = 1.007108027 s; This step = 0.329264617 s; Avg. per step = 0.3357026757 s STEP 4 starts ... in evolve london j evolve london J using E STEP 4 ends. TIME = 1.733249881e-17 DT = 4.333124703e-18 Evolve time = 1.340271434 s; This step = 0.333163407 s; Avg. per step = 0.3350678585 s STEP 5 starts ... in evolve london j evolve london J using E --- INFO : Writing plotfile diags/plt000005 STEP 5 ends. TIME = 2.166562352e-17 DT = 4.333124703e-18 Evolve time = 1.864300115 s; This step = 0.524028681 s; Avg. per step = 0.372860023 s Total Time : 2.292509739 TinyProfiler total time across processes [min...avg...max]: 2.295 ... 2.298 ... 2.302 -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- FabArray::setVal() 291 0.4355 0.5746 0.6482 28.16% amrex::Copy() 282 0.4233 0.4379 0.4508 19.59% WarpX::MacroscopicEvolveE() 5 0.3796 0.3817 0.3853 16.74% FabArray::ParallelCopy_finish() 264 0.03036 0.1038 0.2428 10.55% WarpX::InitData() 1 0.1235 0.1303 0.1357 5.90% PML::Exchange 132 0.0968 0.1208 0.1335 5.80% sample::Coarsen() 18 0.121 0.1216 0.1223 5.32% WarpX::EvolveB() 10 0.0868 0.08784 0.08972 3.90% FillBoundary_nowait() 264 0.0786 0.08287 0.085 3.69% FillBoundary_finish() 264 0.02494 0.04401 0.06138 2.67% FabArray::LinComb() 114 0.04679 0.04948 0.05103 2.22% VisMF::Write(FabArray) 2 0.03455 0.03498 0.03583 1.56% WarpX::EvolveBLondon() 5 0.03043 0.03129 0.03274 1.42% FabArray::ParallelCopy_nowait() 264 0.02879 0.03086 0.03271 1.42% WarpX::OneStep_nosub() 5 0.02006 0.02039 0.02063 0.90% ParticleCopyPlan::doHandShake 1 1.676e-05 0.006559 0.01423 0.62% WarpX::DampPML() 5 0.01237 0.01256 0.01268 0.55% WarpX::Evolve::step 5 0.004129 0.005528 0.006969 0.30% DistributionMapping::LeastUsedCPUs() 1 1.171e-05 0.002727 0.005924 0.26% WriteMultiLevelPlotfile() 2 0.0009451 0.001396 0.002209 0.10% main() 1 0.0005519 0.0009978 0.001358 0.06% ablastr::utils::communication::ParallelCopy 264 0.0008484 0.0008906 0.0009535 0.04% FabArray::ParallelCopy() 264 0.0007906 0.0008227 0.0008612 0.04% FlushFormatPlotfile::WriteToFile() 2 3.258e-05 0.0001945 0.0006659 0.03% ablastr::utils::communication::FillBoundary 264 0.0004505 0.0005094 0.0005794 0.03% MultiFab::Copy() 132 0.0004137 0.000441 0.0004627 0.02% FabArray::FillBoundary() 234 0.0003068 0.0003487 0.0003814 0.02% Diagnostics::FilterComputePackFlush() 7 0.0001469 0.0001556 0.0001644 0.01% FillBoundaryAndSync_finish() 30 5.666e-05 6.315e-05 7.27e-05 0.00% FabArray::FillBoundaryAndSync() 30 4.353e-05 5.801e-05 6.426e-05 0.00% FillBoundaryAndSync_nowait() 30 3.071e-05 3.456e-05 4.106e-05 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.451e-06 7.758e-06 1.935e-05 0.00% ParticleCopyPlan::buildMPIStart 1 7.545e-06 9.409e-06 1.39e-05 0.00% AmrMesh::MakeDistributionMap() 1 1.52e-06 5.95e-06 1.162e-05 0.00% ParticleContainer::Redistribute_impl() 1 3.904e-06 5.867e-06 7.93e-06 0.00% ParticleCopyPlan::build 1 2.741e-06 4.095e-06 6.538e-06 0.00% WarpX::Evolve() 1 3.202e-06 3.775e-06 4.302e-06 0.00% REG::WarpX::Evolve() 1 2.477e-06 2.656e-06 3.095e-06 0.00% Other 736 0.003378 0.003631 0.004043 0.18% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- main() 1 2.287 2.289 2.293 99.60% REG::WarpX::Evolve() 1 1.963 1.963 1.964 85.34% WarpX::Evolve() 1 1.963 1.963 1.964 85.34% WarpX::Evolve::step 5 1.864 1.865 1.865 81.03% WarpX::OneStep_nosub() 5 1.29 1.298 1.307 56.78% PML::Exchange 132 1.249 1.272 1.289 56.02% FabArray::setVal() 291 0.4355 0.5746 0.6482 28.16% amrex::Copy() 282 0.4233 0.4379 0.4508 19.59% WarpX::MacroscopicEvolveE() 5 0.3796 0.3817 0.3853 16.74% Diagnostics::FilterComputePackFlush() 7 0.3571 0.3616 0.3667 15.93% WarpX::InitData() 1 0.3221 0.3249 0.3288 14.29% ablastr::utils::communication::ParallelCopy 264 0.06654 0.1382 0.2785 12.10% FabArray::ParallelCopy() 264 0.06566 0.1373 0.2776 12.06% FabArray::ParallelCopy_finish() 264 0.03036 0.1038 0.2428 10.55% MultiFab::Copy() 132 0.2076 0.2187 0.2266 9.84% ablastr::utils::communication::FillBoundary 264 0.1102 0.1267 0.1451 6.30% sample::Coarsen() 18 0.121 0.1216 0.1223 5.32% FabArray::FillBoundary() 234 0.08902 0.1004 0.1133 4.92% WarpX::EvolveB() 10 0.0868 0.08784 0.08972 3.90% FillBoundary_nowait() 264 0.07997 0.08432 0.08636 3.75% FillBoundary_finish() 264 0.02494 0.04401 0.06138 2.67% FabArray::LinComb() 114 0.04679 0.04948 0.05103 2.22% FlushFormatPlotfile::WriteToFile() 2 0.03576 0.03662 0.03814 1.66% WriteMultiLevelPlotfile() 2 0.03573 0.03643 0.03747 1.63% VisMF::Write(FabArray) 2 0.03455 0.03498 0.03583 1.56% FabArray::ParallelCopy_nowait() 264 0.03059 0.03267 0.03445 1.50% WarpX::EvolveBLondon() 5 0.03043 0.03129 0.03274 1.42% FabArray::FillBoundaryAndSync() 30 0.02011 0.02583 0.03125 1.36% FillBoundaryAndSync_nowait() 30 0.0168 0.01755 0.01823 0.79% ParticleContainer::Redistribute_impl() 1 0.0001809 0.006719 0.01439 0.62% ParticleCopyPlan::build 1 2.752e-05 0.006573 0.01425 0.62% ParticleCopyPlan::buildMPIStart 1 2.431e-05 0.006569 0.01424 0.62% ParticleCopyPlan::doHandShake 1 1.676e-05 0.006559 0.01423 0.62% FillBoundaryAndSync_finish() 30 0.003266 0.008231 0.01334 0.58% WarpX::DampPML() 5 0.01237 0.01256 0.01268 0.55% AmrMesh::MakeDistributionMap() 1 1.856e-05 0.002743 0.00594 0.26% DistributionMapping::SFCProcessorMapDoIt() 1 1.704e-05 0.002737 0.005931 0.26% DistributionMapping::LeastUsedCPUs() 1 1.171e-05 0.002727 0.005924 0.26% Other 736 0.01087 0.01323 0.0172 0.75% -------------------------------------------------------------------------------------------- BEGIN REGION WarpX::Evolve() -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- FabArray::setVal() 252 0.3623 0.4985 0.5692 24.73% amrex::Copy() 270 0.4047 0.4195 0.4327 18.80% WarpX::MacroscopicEvolveE() 5 0.3796 0.3817 0.3853 16.74% FabArray::ParallelCopy_finish() 252 0.01824 0.09777 0.2413 10.48% PML::Exchange 126 0.0921 0.1162 0.1292 5.61% WarpX::EvolveB() 10 0.0868 0.08784 0.08972 3.90% FillBoundary_nowait() 252 0.07419 0.07866 0.08066 3.50% sample::Coarsen() 12 0.0715 0.07192 0.0729 3.17% FillBoundary_finish() 252 0.02048 0.0415 0.06085 2.64% FabArray::LinComb() 108 0.04357 0.04637 0.04808 2.09% WarpX::EvolveBLondon() 5 0.03043 0.03129 0.03274 1.42% FabArray::ParallelCopy_nowait() 252 0.02743 0.02943 0.03132 1.36% WarpX::OneStep_nosub() 5 0.02006 0.02039 0.02063 0.90% VisMF::Write(FabArray) 1 0.01737 0.01764 0.018 0.78% WarpX::DampPML() 5 0.01237 0.01256 0.01268 0.55% WarpX::Evolve::step 5 0.004129 0.005528 0.006969 0.30% WriteMultiLevelPlotfile() 1 1.51e-05 0.0007036 0.001057 0.05% ablastr::utils::communication::ParallelCopy 252 0.0008156 0.0008645 0.0009292 0.04% FabArray::ParallelCopy() 252 0.0007616 0.0007969 0.0008397 0.04% ablastr::utils::communication::FillBoundary 252 0.0004279 0.0004867 0.0005609 0.02% MultiFab::Copy() 126 0.0004001 0.0004279 0.0004488 0.02% FabArray::FillBoundary() 222 0.0002911 0.000334 0.0003694 0.02% FlushFormatPlotfile::WriteToFile() 1 1.241e-05 7.207e-05 0.0002453 0.01% Diagnostics::FilterComputePackFlush() 6 0.0001002 0.0001036 0.0001082 0.00% FillBoundaryAndSync_finish() 30 5.666e-05 6.315e-05 7.27e-05 0.00% FabArray::FillBoundaryAndSync() 30 4.353e-05 5.801e-05 6.426e-05 0.00% FillBoundaryAndSync_nowait() 30 3.071e-05 3.456e-05 4.106e-05 0.00% WarpX::Evolve() 1 3.202e-06 3.775e-06 4.302e-06 0.00% REG::WarpX::Evolve() 1 2.477e-06 2.656e-06 3.095e-06 0.00% Other 670 0.00251 0.002709 0.003019 0.13% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- REG::WarpX::Evolve() 1 1.963 1.963 1.964 85.34% WarpX::Evolve() 1 1.963 1.963 1.964 85.34% WarpX::Evolve::step 5 1.864 1.865 1.865 81.03% WarpX::OneStep_nosub() 5 1.29 1.298 1.307 56.78% PML::Exchange 126 1.191 1.211 1.231 53.49% FabArray::setVal() 252 0.3623 0.4985 0.5692 24.73% amrex::Copy() 270 0.4047 0.4195 0.4327 18.80% WarpX::MacroscopicEvolveE() 5 0.3796 0.3817 0.3853 16.74% ablastr::utils::communication::ParallelCopy 252 0.05262 0.1303 0.2749 11.94% FabArray::ParallelCopy() 252 0.05176 0.1294 0.274 11.90% FabArray::ParallelCopy_finish() 252 0.01824 0.09777 0.2413 10.48% Diagnostics::FilterComputePackFlush() 6 0.2253 0.2256 0.2258 9.81% MultiFab::Copy() 126 0.1976 0.2092 0.2175 9.45% ablastr::utils::communication::FillBoundary 252 0.101 0.1196 0.1404 6.10% FabArray::FillBoundary() 222 0.07984 0.09327 0.1086 4.72% WarpX::EvolveB() 10 0.0868 0.08784 0.08972 3.90% FillBoundary_nowait() 252 0.07522 0.07976 0.08166 3.55% sample::Coarsen() 12 0.0715 0.07192 0.0729 3.17% FillBoundary_finish() 252 0.02048 0.0415 0.06085 2.64% FabArray::LinComb() 108 0.04357 0.04637 0.04808 2.09% WarpX::EvolveBLondon() 5 0.03043 0.03129 0.03274 1.42% FabArray::ParallelCopy_nowait() 252 0.02881 0.03083 0.03268 1.42% FabArray::FillBoundaryAndSync() 30 0.02011 0.02583 0.03125 1.36% FlushFormatPlotfile::WriteToFile() 1 0.01765 0.01845 0.01917 0.83% WriteMultiLevelPlotfile() 1 0.01763 0.01838 0.01893 0.82% FillBoundaryAndSync_nowait() 30 0.0168 0.01755 0.01823 0.79% VisMF::Write(FabArray) 1 0.01737 0.01764 0.018 0.78% FillBoundaryAndSync_finish() 30 0.003266 0.008231 0.01334 0.58% WarpX::DampPML() 5 0.01237 0.01256 0.01268 0.55% Other 670 0.009319 0.0116 0.01548 0.67% -------------------------------------------------------------------------------------------- END REGION WarpX::Evolve() Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [london_Rittweger_3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.dx(nvals = 3) :: [(prob_hi-prob_lo), /, nx] [TOP]::my_constants.dy(nvals = 3) :: [(prob_hi-prob_lo), /, ny] [TOP]::my_constants.obs(nvals = 1) :: [-400.e-9] [TOP]::plt(nvals = 1) :: [london_Rittweger_3d_plt] Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 4 5 B 7 B 9 B 8192 KiB 8192 KiB 8192 KiB main() 184 3302 B 3305 B 3308 B 3584 B 3584 B 3584 B WarpX::InitData() 52 2452 B 2455 B 2459 B 2560 B 2560 B 2560 B Unprofiled 76 0 B 0 B 0 B 256 B 256 B 256 B -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------- WarpX::InitData() 280 130 MiB 130 MiB 130 MiB 135 MiB 135 MiB 135 MiB PML::Exchange 2112 4853 KiB 4973 KiB 5064 KiB 9974 KiB 9974 KiB 9974 KiB FillBoundary_nowait() 1932 16 KiB 20 KiB 23 KiB 601 KiB 606 KiB 613 KiB FabArray::ParallelCopy_nowait() 2112 879 B 1194 B 1906 B 76 KiB 76 KiB 76 KiB --------------------------------------------------------------------------------------------------------------- AMReX (26.09-11-gae079342654b) finalized