Initializing AMReX (26.09-11-gae079342654b)... MPI initialized with 4 MPI processes MPI initialized with thread support level 3 AMReX (26.09-11-gae079342654b) initialized London class is constructed WarpX (4fa5cde3d7bd) _____ __ .__ / _ \________/ |_ ____ _____ |__| ______ / /_\ \_ __ \ __\/ __ \ / \| |/ ___/ / | \ | \/| | \ ___/| Y Y \ |\___ \ \____|__ /__| |__| \___ >__|_| /__/____ > \/ \/ \/ \/ Level 0: dt = 4.333124703e-18 ; dx = 1e-08 ; dy = 1e-08 ; dz = 1e-08 --- INFO : we are in init data of macro calling london Grids Summary: Level 0 8 grids 2097152 cells 100 % of domain smallest grid: 64 x 64 x 64 biggest grid: 64 x 64 x 64 ------------------------------------------------------------------------------- --------------------------- MAIN EM PIC PARAMETERS ---------------------------- ------------------------------------------------------------------------------- Precision: | DOUBLE Particle precision: | DOUBLE Geometry: | 3D (XYZ) Operation mode: | Electromagnetic | - macroscopic | - Lax-Wendroff algorithm ------------------------------------------------------------------------------- Current Deposition: | Esirkepov Particle Pusher: | Boris Charge Deposition: | standard Field Gathering: | energy-conserving Particle Shape Factor:| 0 ------------------------------------------------------------------------------- Maxwell Solver: | Yee ------------------------------------------------------------------------------- For full input parameters, see the file: warpx_used_inputs --- INFO : Writing plotfile diags/plt000000 STEP 1 starts ... evolve london J using E in evolve london j evolve london J using E Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [london_Rittweger_3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.dx(nvals = 3) :: [(prob_hi-prob_lo), /, nx] [TOP]::my_constants.dy(nvals = 3) :: [(prob_hi-prob_lo), /, ny] [TOP]::my_constants.obs(nvals = 1) :: [-400.e-9] [TOP]::plt(nvals = 1) :: [london_Rittweger_3d_plt] **** WARNINGS ****************************************************************** * GLOBAL warning list after [ FIRST STEP ] * * --> [! ] [Species] [raised 4 times] * particles.nspecies is ignored. Just use particles.species_names please. * @ Raised by: ALL * ******************************************************************************** STEP 1 ends. TIME = 4.333124703e-18 DT = 4.333124703e-18 Evolve time = 0.351146423 s; This step = 0.351146423 s; Avg. per step = 0.351146423 s STEP 2 starts ... in evolve london j evolve london J using E STEP 2 ends. TIME = 8.666249407e-18 DT = 4.333124703e-18 Evolve time = 0.683032174 s; This step = 0.331885751 s; Avg. per step = 0.341516087 s STEP 3 starts ... in evolve london j evolve london J using E STEP 3 ends. TIME = 1.299937411e-17 DT = 4.333124703e-18 Evolve time = 1.01802935 s; This step = 0.334997176 s; Avg. per step = 0.3393431167 s STEP 4 starts ... in evolve london j evolve london J using E STEP 4 ends. TIME = 1.733249881e-17 DT = 4.333124703e-18 Evolve time = 1.346472979 s; This step = 0.328443629 s; Avg. per step = 0.3366182447 s STEP 5 starts ... in evolve london j evolve london J using E --- INFO : Writing plotfile diags/plt000005 STEP 5 ends. TIME = 2.166562352e-17 DT = 4.333124703e-18 Evolve time = 1.873687368 s; This step = 0.527214389 s; Avg. per step = 0.3747374736 s Total Time : 2.336681008 TinyProfiler total time across processes [min...avg...max]: 2.34 ... 2.342 ... 2.344 -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- FabArray::setVal() 291 0.5908 0.6081 0.632 26.96% amrex::Copy() 282 0.4326 0.4449 0.4525 19.30% WarpX::MacroscopicEvolveE() 5 0.3793 0.3818 0.3879 16.54% WarpX::InitData() 1 0.1218 0.1403 0.1576 6.72% PML::Exchange 132 0.1278 0.1321 0.1348 5.75% sample::Coarsen() 18 0.1201 0.1207 0.1222 5.21% FabArray::ParallelCopy_finish() 264 0.04259 0.0806 0.09643 4.11% WarpX::EvolveB() 10 0.08525 0.08671 0.08939 3.81% FillBoundary_nowait() 264 0.07826 0.08329 0.08711 3.72% FabArray::LinComb() 114 0.04732 0.04877 0.05041 2.15% FillBoundary_finish() 264 0.02135 0.0368 0.04948 2.11% ParticleCopyPlan::doHandShake 1 2.038e-05 0.02128 0.04252 1.81% VisMF::Write(FabArray) 2 0.03477 0.03606 0.03762 1.60% WarpX::EvolveBLondon() 5 0.03027 0.03109 0.03271 1.40% FabArray::ParallelCopy_nowait() 264 0.02667 0.03004 0.03257 1.39% WarpX::OneStep_nosub() 5 0.01984 0.02006 0.02021 0.86% WarpX::DampPML() 5 0.01314 0.01328 0.01342 0.57% WarpX::Evolve::step 5 0.00432 0.005099 0.00556 0.24% ablastr::utils::communication::ParallelCopy 264 0.0007776 0.001163 0.002149 0.09% WriteMultiLevelPlotfile() 2 3.28e-05 0.001502 0.002139 0.09% main() 1 0.0005718 0.001299 0.001656 0.07% FabArray::ParallelCopy() 264 0.0007487 0.0008111 0.0008379 0.04% ablastr::utils::communication::FillBoundary 264 0.0004409 0.0005141 0.0005798 0.02% FlushFormatPlotfile::WriteToFile() 2 3.056e-05 0.0001717 0.0005638 0.02% MultiFab::Copy() 132 0.0004476 0.0004642 0.0004886 0.02% FabArray::FillBoundary() 234 0.0003262 0.0003428 0.0003695 0.02% Diagnostics::FilterComputePackFlush() 7 0.00015 0.0002067 0.0003217 0.01% FillBoundaryAndSync_finish() 30 4.796e-05 5.491e-05 6.178e-05 0.00% FabArray::FillBoundaryAndSync() 30 4.745e-05 5.303e-05 5.865e-05 0.00% FillBoundaryAndSync_nowait() 30 3.474e-05 3.888e-05 4.4e-05 0.00% ParticleCopyPlan::buildMPIStart 1 7.089e-06 8.055e-06 9.922e-06 0.00% AmrMesh::MakeDistributionMap() 1 2.321e-06 7.131e-06 9.877e-06 0.00% ParticleCopyPlan::build 1 2.781e-06 5.199e-06 8.116e-06 0.00% ParticleContainer::Redistribute_impl() 1 4.256e-06 4.843e-06 5.258e-06 0.00% WarpX::Evolve() 1 4.426e-06 4.673e-06 5.251e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.894e-06 4.052e-06 4.37e-06 0.00% REG::WarpX::Evolve() 1 2.354e-06 2.801e-06 3.063e-06 0.00% Other 737 0.003192 0.005935 0.009554 0.41% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- main() 1 2.331 2.334 2.337 99.67% REG::WarpX::Evolve() 1 1.978 1.98 1.981 84.51% WarpX::Evolve() 1 1.978 1.98 1.981 84.51% WarpX::Evolve::step 5 1.874 1.875 1.876 80.01% PML::Exchange 132 1.278 1.298 1.315 56.10% WarpX::OneStep_nosub() 5 1.297 1.3 1.303 55.57% FabArray::setVal() 291 0.5908 0.6081 0.632 26.96% amrex::Copy() 282 0.4326 0.4449 0.4525 19.30% WarpX::MacroscopicEvolveE() 5 0.3793 0.3818 0.3879 16.54% Diagnostics::FilterComputePackFlush() 7 0.3677 0.3709 0.3746 15.98% WarpX::InitData() 1 0.3509 0.3525 0.3549 15.14% MultiFab::Copy() 132 0.2185 0.2241 0.228 9.73% ablastr::utils::communication::FillBoundary 264 0.1034 0.12 0.1351 5.76% ablastr::utils::communication::ParallelCopy 264 0.07857 0.1144 0.1307 5.57% FabArray::ParallelCopy() 264 0.0777 0.1132 0.1286 5.48% sample::Coarsen() 18 0.1201 0.1207 0.1222 5.21% FabArray::FillBoundary() 234 0.08173 0.09451 0.1055 4.50% FabArray::ParallelCopy_finish() 264 0.04259 0.0806 0.09643 4.11% WarpX::EvolveB() 10 0.08525 0.08671 0.08939 3.81% FillBoundary_nowait() 264 0.07964 0.0846 0.08842 3.77% FabArray::LinComb() 114 0.04732 0.04877 0.05041 2.15% FillBoundary_finish() 264 0.02135 0.0368 0.04948 2.11% ParticleContainer::Redistribute_impl() 1 0.0001693 0.02143 0.04268 1.82% ParticleCopyPlan::build 1 3.08e-05 0.02129 0.04254 1.81% ParticleCopyPlan::buildMPIStart 1 2.753e-05 0.02129 0.04253 1.81% ParticleCopyPlan::doHandShake 1 2.038e-05 0.02128 0.04252 1.81% FlushFormatPlotfile::WriteToFile() 2 0.0356 0.03779 0.04018 1.71% WriteMultiLevelPlotfile() 2 0.03556 0.03762 0.03962 1.69% VisMF::Write(FabArray) 2 0.03477 0.03606 0.03762 1.60% FabArray::ParallelCopy_nowait() 264 0.0284 0.03184 0.03428 1.46% WarpX::EvolveBLondon() 5 0.03027 0.03109 0.03271 1.40% FabArray::FillBoundaryAndSync() 30 0.0201 0.02498 0.02962 1.26% FillBoundaryAndSync_nowait() 30 0.01689 0.0177 0.01803 0.77% WarpX::DampPML() 5 0.01314 0.01328 0.01342 0.57% FillBoundaryAndSync_finish() 30 0.003163 0.007225 0.01169 0.50% AmrMesh::MakeDistributionMap() 1 3.196e-05 0.002468 0.005692 0.24% DistributionMapping::SFCProcessorMapDoIt() 1 2.208e-05 0.002461 0.005685 0.24% Other 737 0.01077 0.01472 0.02047 0.87% -------------------------------------------------------------------------------------------- BEGIN REGION WarpX::Evolve() -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- FabArray::setVal() 252 0.5133 0.53 0.5643 24.07% amrex::Copy() 270 0.4144 0.4265 0.434 18.51% WarpX::MacroscopicEvolveE() 5 0.3793 0.3818 0.3879 16.54% PML::Exchange 126 0.1232 0.1271 0.1298 5.54% FabArray::ParallelCopy_finish() 252 0.03039 0.07304 0.09299 3.97% WarpX::EvolveB() 10 0.08525 0.08671 0.08939 3.81% FillBoundary_nowait() 252 0.07446 0.07921 0.08273 3.53% sample::Coarsen() 12 0.07268 0.07308 0.07394 3.15% FabArray::LinComb() 108 0.04429 0.04606 0.04799 2.05% FillBoundary_finish() 252 0.02087 0.03383 0.04407 1.88% WarpX::EvolveBLondon() 5 0.03027 0.03109 0.03271 1.40% FabArray::ParallelCopy_nowait() 252 0.02543 0.0287 0.03128 1.33% WarpX::OneStep_nosub() 5 0.01984 0.02006 0.02021 0.86% VisMF::Write(FabArray) 1 0.017 0.01736 0.0177 0.75% WarpX::DampPML() 5 0.01314 0.01328 0.01342 0.57% WarpX::Evolve::step 5 0.00432 0.005099 0.00556 0.24% ablastr::utils::communication::ParallelCopy 252 0.0007433 0.001136 0.002122 0.09% WriteMultiLevelPlotfile() 1 1.588e-05 0.0006739 0.0009415 0.04% FabArray::ParallelCopy() 252 0.0007254 0.0007827 0.0008092 0.03% ablastr::utils::communication::FillBoundary 252 0.0004247 0.0004871 0.0005425 0.02% MultiFab::Copy() 126 0.0004328 0.0004513 0.0004763 0.02% FabArray::FillBoundary() 222 0.0003129 0.0003275 0.0003521 0.02% Diagnostics::FilterComputePackFlush() 6 0.0001072 0.0001535 0.0002799 0.01% FlushFormatPlotfile::WriteToFile() 1 1.306e-05 7.232e-05 0.0002432 0.01% FillBoundaryAndSync_finish() 30 4.796e-05 5.491e-05 6.178e-05 0.00% FabArray::FillBoundaryAndSync() 30 4.745e-05 5.303e-05 5.865e-05 0.00% FillBoundaryAndSync_nowait() 30 3.474e-05 3.888e-05 4.4e-05 0.00% WarpX::Evolve() 1 4.426e-06 4.673e-06 5.251e-06 0.00% REG::WarpX::Evolve() 1 2.354e-06 2.801e-06 3.063e-06 0.00% Other 670 0.002291 0.002534 0.002828 0.12% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- REG::WarpX::Evolve() 1 1.978 1.98 1.981 84.51% WarpX::Evolve() 1 1.978 1.98 1.981 84.51% WarpX::Evolve::step 5 1.874 1.875 1.876 80.01% WarpX::OneStep_nosub() 5 1.297 1.3 1.303 55.57% PML::Exchange 126 1.222 1.235 1.253 53.44% FabArray::setVal() 252 0.5133 0.53 0.5643 24.07% amrex::Copy() 270 0.4144 0.4265 0.434 18.51% WarpX::MacroscopicEvolveE() 5 0.3793 0.3818 0.3879 16.54% Diagnostics::FilterComputePackFlush() 6 0.2328 0.233 0.2335 9.96% MultiFab::Copy() 126 0.2094 0.2153 0.2194 9.36% ablastr::utils::communication::ParallelCopy 252 0.06467 0.105 0.1262 5.38% FabArray::ParallelCopy() 252 0.06382 0.1039 0.1254 5.35% ablastr::utils::communication::FillBoundary 252 0.09881 0.1125 0.1248 5.32% FabArray::FillBoundary() 222 0.07714 0.08708 0.0953 4.06% FabArray::ParallelCopy_finish() 252 0.03039 0.07304 0.09299 3.97% WarpX::EvolveB() 10 0.08525 0.08671 0.08939 3.81% FillBoundary_nowait() 252 0.07549 0.08016 0.08364 3.57% sample::Coarsen() 12 0.07268 0.07308 0.07394 3.15% FabArray::LinComb() 108 0.04429 0.04606 0.04799 2.05% FillBoundary_finish() 252 0.02087 0.03383 0.04407 1.88% WarpX::EvolveBLondon() 5 0.03027 0.03109 0.03271 1.40% FabArray::ParallelCopy_nowait() 252 0.02674 0.03009 0.03262 1.39% FabArray::FillBoundaryAndSync() 30 0.0201 0.02498 0.02962 1.26% FlushFormatPlotfile::WriteToFile() 1 0.01755 0.01813 0.01884 0.80% WriteMultiLevelPlotfile() 1 0.01753 0.01806 0.0186 0.79% FillBoundaryAndSync_nowait() 30 0.01689 0.0177 0.01803 0.77% VisMF::Write(FabArray) 1 0.017 0.01736 0.0177 0.75% WarpX::DampPML() 5 0.01314 0.01328 0.01342 0.57% FillBoundaryAndSync_finish() 30 0.003163 0.007225 0.01169 0.50% Other 670 0.009154 0.01058 0.01301 0.56% -------------------------------------------------------------------------------------------- END REGION WarpX::Evolve() Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [london_Rittweger_3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.dx(nvals = 3) :: [(prob_hi-prob_lo), /, nx] [TOP]::my_constants.dy(nvals = 3) :: [(prob_hi-prob_lo), /, ny] [TOP]::my_constants.obs(nvals = 1) :: [-400.e-9] [TOP]::plt(nvals = 1) :: [london_Rittweger_3d_plt] Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 4 5 B 6 B 7 B 8192 KiB 8192 KiB 8192 KiB main() 184 3302 B 3306 B 3311 B 3584 B 3584 B 3584 B WarpX::InitData() 52 2436 B 2444 B 2454 B 2560 B 2560 B 2560 B Unprofiled 76 0 B 0 B 0 B 256 B 256 B 256 B -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------- WarpX::InitData() 280 129 MiB 129 MiB 129 MiB 135 MiB 135 MiB 135 MiB PML::Exchange 2112 4873 KiB 4946 KiB 5025 KiB 9974 KiB 9974 KiB 9974 KiB FillBoundary_nowait() 1932 15 KiB 18 KiB 21 KiB 601 KiB 606 KiB 613 KiB FabArray::ParallelCopy_nowait() 2112 936 B 1063 B 1163 B 76 KiB 76 KiB 76 KiB --------------------------------------------------------------------------------------------------------------- AMReX (26.09-11-gae079342654b) finalized