Initializing AMReX (26.09-122-ga846c6a9c672)... MPI initialized with 4 MPI processes MPI initialized with thread support level 3 AMReX (26.09-122-ga846c6a9c672) initialized WarpX (4fa5cde3d7bd) _____ __ .__ / _ \________/ |_ ____ _____ |__| ______ / /_\ \_ __ \ __\/ __ \ / \| |/ ___/ / | \ | \/| | \ ___/| Y Y \ |\___ \ \____|__ /__| |__| \___ >__|_| /__/____ > \/ \/ \/ \/ Level 0: dt = 7.703332806e-16 ; dx = 5e-07 ; dy = 5e-07 ; dz = 5e-07 --- INFO : we are in init data of macro Grids Summary: Level 0 4 grids 2097152 cells 100 % of domain smallest grid: 128 x 64 x 64 biggest grid: 128 x 64 x 64 ------------------------------------------------------------------------------- --------------------------- MAIN EM PIC PARAMETERS ---------------------------- ------------------------------------------------------------------------------- Precision: | DOUBLE Particle precision: | DOUBLE Geometry: | 3D (XYZ) Operation mode: | Electromagnetic | - macroscopic | - Lax-Wendroff algorithm ------------------------------------------------------------------------------- Current Deposition: | Esirkepov Particle Pusher: | Boris Charge Deposition: | standard Field Gathering: | energy-conserving Particle Shape Factor:| 0 ------------------------------------------------------------------------------- Maxwell Solver: | Yee ------------------------------------------------------------------------------- For full input parameters, see the file: warpx_used_inputs --- INFO : Writing plotfile diags/plt000000 STEP 1 starts ... Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [roger_pec_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.TP(nvals = 1) :: [5.4545e-10] [TOP]::my_constants.dx(nvals = 3) :: [Lx, /, nx] [TOP]::my_constants.dy(nvals = 3) :: [Ly, /, ny] [TOP]::my_constants.dz(nvals = 3) :: [Lz, /, nz] [TOP]::my_constants.eps_r_nb(nvals = 1) :: [13.] [TOP]::my_constants.flag_none(nvals = 1) :: [0] [TOP]::my_constants.flag_ss(nvals = 1) :: [2] [TOP]::my_constants.mu_r_nb(nvals = 1) :: [1.0] [TOP]::my_constants.sigma_nb(nvals = 1) :: [1.e7] [TOP]::plt(nvals = 1) :: [roger_pec_plt] **** WARNINGS ****************************************************************** * GLOBAL warning list after [ FIRST STEP ] * * --> [! ] [Species] [raised 4 times] * particles.nspecies is ignored. Just use particles.species_names please. * @ Raised by: ALL * ******************************************************************************** STEP 1 ends. TIME = 7.703332806e-16 DT = 7.703332806e-16 Evolve time = 0.927691058 s; This step = 0.927691058 s; Avg. per step = 0.927691058 s STEP 2 starts ... STEP 2 ends. TIME = 1.540666561e-15 DT = 7.703332806e-16 Evolve time = 1.543490139 s; This step = 0.615799081 s; Avg. per step = 0.7717450695 s STEP 3 starts ... STEP 3 ends. TIME = 2.310999842e-15 DT = 7.703332806e-16 Evolve time = 2.224730202 s; This step = 0.681240063 s; Avg. per step = 0.741576734 s --- INFO : Writing plotfile diags/plt000003 Total Time : 2.626251328 TinyProfiler total time across processes [min...avg...max]: 2.63 ... 2.633 ... 2.637 -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- WarpX::OneStep_nosub() 3 1.008 1.051 1.13 42.85% WarpX::MacroscopicEvolveE() 3 0.2889 0.3146 0.3436 13.03% FabArray::setVal() 177 0.3175 0.3303 0.3414 12.95% amrex::Copy() 144 0.2479 0.2549 0.2643 10.02% FabArray::ParallelCopy_finish() 144 0.0241 0.08391 0.1369 5.19% FillBoundary_finish() 144 0.01072 0.08841 0.1305 4.95% FabArray::LinComb() 72 0.07627 0.09739 0.1201 4.56% FabArray::ParallelCopy_nowait() 144 0.08764 0.08965 0.09116 3.46% sample::Coarsen() 12 0.08812 0.08847 0.08879 3.37% WarpX::EvolveB() 6 0.08107 0.08451 0.08852 3.36% VisMF::Write(FabArray) 2 0.03536 0.03769 0.04047 1.53% WarpX::InitData() 1 0.03296 0.03639 0.04045 1.53% PML::Exchange 72 0.02163 0.02325 0.02495 0.95% FillBoundary_nowait() 144 0.01537 0.01999 0.02462 0.93% WarpX::DampPML() 3 0.006973 0.01022 0.01354 0.51% DistributionMapping::LeastUsedCPUs() 1 1.654e-05 0.003095 0.006151 0.23% main() 1 0.001121 0.001771 0.002217 0.08% WriteMultiLevelPlotfile() 2 0.0008404 0.001095 0.001223 0.05% FlushFormatPlotfile::WriteToFile() 2 3.72e-05 0.0001752 0.000584 0.02% FabArray::ParallelCopy() 144 0.0003566 0.0004357 0.0005178 0.02% WarpX::Evolve::step 3 0.0002121 0.0003282 0.0005081 0.02% ablastr::utils::communication::ParallelCopy 144 0.0003618 0.00041 0.0004604 0.02% ablastr::utils::communication::FillBoundary 144 0.0002231 0.0002521 0.0002794 0.01% MultiFab::Copy() 72 0.0002248 0.0002324 0.0002449 0.01% FabArray::FillBoundary() 126 0.0001398 0.0001448 0.0001518 0.01% Diagnostics::FilterComputePackFlush() 5 0.0001002 0.0001111 0.0001239 0.00% ablastr::utils::communication::OverrideSync 18 2.035e-05 2.386e-05 3.042e-05 0.00% FAbArray::OverrideSync() 18 1.566e-05 1.999e-05 2.589e-05 0.00% OverrideSync_finish() 18 1.005e-05 1.129e-05 1.201e-05 0.00% ParticleCopyPlan::build 1 6.452e-06 9.046e-06 1.161e-05 0.00% ParticleContainer::Redistribute_impl() 1 4.386e-06 6.344e-06 1.141e-05 0.00% AmrMesh::MakeDistributionMap() 1 1.788e-06 7.012e-06 9.79e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.583e-06 4.749e-06 7.37e-06 0.00% WarpX::Evolve() 1 2.939e-06 3.484e-06 4.399e-06 0.00% REG::WarpX::Evolve() 1 1.724e-06 2.287e-06 2.604e-06 0.00% Other 435 0.001361 0.004234 0.007827 0.30% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- main() 1 2.62 2.623 2.626 99.59% REG::WarpX::Evolve() 1 2.349 2.352 2.354 89.27% WarpX::Evolve() 1 2.349 2.352 2.354 89.27% WarpX::Evolve::step 3 2.225 2.227 2.23 84.56% WarpX::OneStep_nosub() 3 1.957 1.957 1.957 74.23% PML::Exchange 72 0.767 0.8102 0.8516 32.30% WarpX::MacroscopicEvolveE() 3 0.2889 0.3146 0.3436 13.03% FabArray::setVal() 177 0.3175 0.3303 0.3414 12.95% Diagnostics::FilterComputePackFlush() 5 0.2691 0.2809 0.2946 11.17% WarpX::InitData() 1 0.2647 0.27 0.2757 10.45% amrex::Copy() 144 0.2479 0.2549 0.2643 10.02% ablastr::utils::communication::ParallelCopy 144 0.1151 0.1753 0.2269 8.61% FabArray::ParallelCopy() 144 0.1147 0.1749 0.2265 8.59% FabArray::ParallelCopy_finish() 144 0.0241 0.08391 0.1369 5.19% MultiFab::Copy() 72 0.1191 0.1259 0.1322 5.01% FillBoundary_finish() 144 0.01072 0.08841 0.1305 4.95% FabArray::LinComb() 72 0.07627 0.09739 0.1201 4.56% ablastr::utils::communication::OverrideSync 18 0.005061 0.07876 0.117 4.44% FAbArray::OverrideSync() 18 0.005039 0.07874 0.117 4.44% OverrideSync_finish() 18 0.004358 0.0781 0.1163 4.41% FabArray::ParallelCopy_nowait() 144 0.08855 0.09052 0.09195 3.49% sample::Coarsen() 12 0.08812 0.08847 0.08879 3.37% WarpX::EvolveB() 6 0.08107 0.08451 0.08852 3.36% FlushFormatPlotfile::WriteToFile() 2 0.03651 0.03902 0.04241 1.61% WriteMultiLevelPlotfile() 2 0.03647 0.03884 0.04183 1.59% VisMF::Write(FabArray) 2 0.03536 0.03769 0.04047 1.53% ablastr::utils::communication::FillBoundary 144 0.03011 0.0306 0.03118 1.18% FabArray::FillBoundary() 126 0.02681 0.02774 0.02871 1.09% FillBoundary_nowait() 144 0.0158 0.02045 0.0251 0.95% WarpX::DampPML() 3 0.006973 0.01022 0.01354 0.51% AmrMesh::MakeDistributionMap() 1 3.09e-05 0.003108 0.006167 0.23% DistributionMapping::SFCProcessorMapDoIt() 1 2.134e-05 0.003101 0.006157 0.23% DistributionMapping::LeastUsedCPUs() 1 1.654e-05 0.003095 0.006151 0.23% ParticleContainer::Redistribute_impl() 1 0.0001236 0.002772 0.005992 0.23% ParticleCopyPlan::build 1 2.969e-05 0.002673 0.005881 0.22% Other 435 0.006518 0.01312 0.02095 0.79% -------------------------------------------------------------------------------------------- BEGIN REGION WarpX::Evolve() -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- WarpX::OneStep_nosub() 3 1.008 1.051 1.13 42.85% WarpX::MacroscopicEvolveE() 3 0.2889 0.3146 0.3436 13.03% amrex::Copy() 132 0.2298 0.236 0.2446 9.27% FabArray::setVal() 132 0.2274 0.2307 0.2326 8.82% FillBoundary_finish() 132 0.01021 0.08754 0.1293 4.90% FabArray::LinComb() 66 0.07102 0.09048 0.1121 4.25% FabArray::ParallelCopy_finish() 132 0.01611 0.06443 0.107 4.06% WarpX::EvolveB() 6 0.08107 0.08451 0.08852 3.36% FabArray::ParallelCopy_nowait() 132 0.08071 0.08241 0.08368 3.17% sample::Coarsen() 6 0.039 0.03921 0.03969 1.51% FillBoundary_nowait() 132 0.01411 0.01837 0.02264 0.86% PML::Exchange 66 0.01903 0.02048 0.02236 0.85% VisMF::Write(FabArray) 1 0.01751 0.01785 0.01818 0.69% WriteMultiLevelPlotfile() 1 1.567e-05 0.00051 0.0008852 0.03% WarpX::Evolve::step 3 0.0002121 0.0003282 0.0005081 0.02% FabArray::ParallelCopy() 132 0.0003323 0.0004031 0.000483 0.02% ablastr::utils::communication::ParallelCopy 132 0.0003363 0.0003842 0.0004307 0.02% ablastr::utils::communication::FillBoundary 132 0.0002063 0.0002343 0.0002592 0.01% FlushFormatPlotfile::WriteToFile() 1 1.255e-05 7.314e-05 0.0002482 0.01% MultiFab::Copy() 66 0.0002144 0.0002202 0.0002316 0.01% FabArray::FillBoundary() 114 0.0001304 0.0001345 0.00014 0.01% Diagnostics::FilterComputePackFlush() 4 5.322e-05 5.808e-05 6.289e-05 0.00% ablastr::utils::communication::OverrideSync 18 2.035e-05 2.386e-05 3.042e-05 0.00% FAbArray::OverrideSync() 18 1.566e-05 1.999e-05 2.589e-05 0.00% OverrideSync_finish() 18 1.005e-05 1.129e-05 1.201e-05 0.00% WarpX::Evolve() 1 2.939e-06 3.484e-06 4.399e-06 0.00% REG::WarpX::Evolve() 1 1.724e-06 2.287e-06 2.604e-06 0.00% Other 371 0.007905 0.01129 0.01483 0.56% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- REG::WarpX::Evolve() 1 2.349 2.352 2.354 89.27% WarpX::Evolve() 1 2.349 2.352 2.354 89.27% WarpX::Evolve::step 3 2.225 2.227 2.23 84.56% WarpX::OneStep_nosub() 3 1.957 1.957 1.957 74.23% PML::Exchange 66 0.6923 0.7261 0.7572 28.72% WarpX::MacroscopicEvolveE() 3 0.2889 0.3146 0.3436 13.03% amrex::Copy() 132 0.2298 0.236 0.2446 9.27% FabArray::setVal() 132 0.2274 0.2307 0.2326 8.82% ablastr::utils::communication::ParallelCopy 132 0.09958 0.1483 0.1893 7.18% FabArray::ParallelCopy() 132 0.09925 0.1479 0.1889 7.16% FillBoundary_finish() 132 0.01021 0.08754 0.1293 4.90% Diagnostics::FilterComputePackFlush() 4 0.124 0.1242 0.1246 4.73% MultiFab::Copy() 66 0.1119 0.118 0.1237 4.69% ablastr::utils::communication::OverrideSync 18 0.005061 0.07876 0.117 4.44% FAbArray::OverrideSync() 18 0.005039 0.07874 0.117 4.44% OverrideSync_finish() 18 0.004358 0.0781 0.1163 4.41% FabArray::LinComb() 66 0.07102 0.09048 0.1121 4.25% FabArray::ParallelCopy_finish() 132 0.01611 0.06443 0.107 4.06% WarpX::EvolveB() 6 0.08107 0.08451 0.08852 3.36% FabArray::ParallelCopy_nowait() 132 0.0814 0.08305 0.08427 3.20% sample::Coarsen() 6 0.039 0.03921 0.03969 1.51% ablastr::utils::communication::FillBoundary 132 0.02742 0.02793 0.0285 1.08% FabArray::FillBoundary() 114 0.02414 0.02509 0.02604 0.99% FillBoundary_nowait() 132 0.01441 0.01867 0.02295 0.87% FlushFormatPlotfile::WriteToFile() 1 0.01802 0.01846 0.01908 0.72% WriteMultiLevelPlotfile() 1 0.01801 0.01839 0.01884 0.71% VisMF::Write(FabArray) 1 0.01751 0.01785 0.01818 0.69% Other 371 0.01276 0.01718 0.02173 0.82% -------------------------------------------------------------------------------------------- END REGION WarpX::Evolve() Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [roger_pec_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.TP(nvals = 1) :: [5.4545e-10] [TOP]::my_constants.dx(nvals = 3) :: [Lx, /, nx] [TOP]::my_constants.dy(nvals = 3) :: [Ly, /, ny] [TOP]::my_constants.dz(nvals = 3) :: [Lz, /, nz] [TOP]::my_constants.eps_r_nb(nvals = 1) :: [13.] [TOP]::my_constants.flag_none(nvals = 1) :: [0] [TOP]::my_constants.flag_ss(nvals = 1) :: [2] [TOP]::my_constants.mu_r_nb(nvals = 1) :: [1.0] [TOP]::my_constants.sigma_nb(nvals = 1) :: [1.e7] [TOP]::plt(nvals = 1) :: [roger_pec_plt] Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 4 5 B 7 B 10 B 8192 KiB 8192 KiB 8192 KiB main() 280 3304 B 3307 B 3311 B 3584 B 3584 B 3584 B WarpX::OneStep_nosub() 24 2213 B 2215 B 2217 B 2560 B 2560 B 2560 B WarpX::InitData() 12 735 B 737 B 740 B 768 B 768 B 768 B Unprofiled 88 0 B 0 B 0 B 256 B 256 B 256 B -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------- WarpX::InitData() 286 151 MiB 167 MiB 182 MiB 155 MiB 171 MiB 187 MiB PML::Exchange 1296 3133 KiB 3208 KiB 3272 KiB 10 MiB 10 MiB 11 MiB FillBoundary_nowait() 1074 4299 B 5543 B 7925 B 391 KiB 394 KiB 395 KiB FabArray::ParallelCopy_nowait() 1152 2980 B 3187 B 3428 B 86 KiB 104 KiB 122 KiB --------------------------------------------------------------------------------------------------------------- AMReX (26.09-122-ga846c6a9c672) finalized