Initializing AMReX (26.09-136-g53fb957f5e13)... MPI initialized with 4 MPI processes MPI initialized with thread support level 3 AMReX (26.09-136-g53fb957f5e13) initialized WarpX (4fa5cde3d7bd) _____ __ .__ / _ \________/ |_ ____ _____ |__| ______ / /_\ \_ __ \ __\/ __ \ / \| |/ ___/ / | \ | \/| | \ ___/| Y Y \ |\___ \ \____|__ /__| |__| \___ >__|_| /__/____ > \/ \/ \/ \/ Level 0: dt = 7.703332806e-16 ; dx = 5e-07 ; dy = 5e-07 ; dz = 5e-07 --- INFO : we are in init data of macro Grids Summary: Level 0 4 grids 2097152 cells 100 % of domain smallest grid: 128 x 64 x 64 biggest grid: 128 x 64 x 64 ------------------------------------------------------------------------------- --------------------------- MAIN EM PIC PARAMETERS ---------------------------- ------------------------------------------------------------------------------- Precision: | DOUBLE Particle precision: | DOUBLE Geometry: | 3D (XYZ) Operation mode: | Electromagnetic | - macroscopic | - Lax-Wendroff algorithm ------------------------------------------------------------------------------- Current Deposition: | Esirkepov Particle Pusher: | Boris Charge Deposition: | standard Field Gathering: | energy-conserving Particle Shape Factor:| 0 ------------------------------------------------------------------------------- Maxwell Solver: | Yee ------------------------------------------------------------------------------- For full input parameters, see the file: warpx_used_inputs --- INFO : Writing plotfile diags/plt000000 STEP 1 starts ... Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [roger_pec_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.TP(nvals = 1) :: [5.4545e-10] [TOP]::my_constants.dx(nvals = 3) :: [Lx, /, nx] [TOP]::my_constants.dy(nvals = 3) :: [Ly, /, ny] [TOP]::my_constants.dz(nvals = 3) :: [Lz, /, nz] [TOP]::my_constants.eps_r_nb(nvals = 1) :: [13.] [TOP]::my_constants.flag_none(nvals = 1) :: [0] [TOP]::my_constants.flag_ss(nvals = 1) :: [2] [TOP]::my_constants.mu_r_nb(nvals = 1) :: [1.0] [TOP]::my_constants.sigma_nb(nvals = 1) :: [1.e7] [TOP]::plt(nvals = 1) :: [roger_pec_plt] **** WARNINGS ****************************************************************** * GLOBAL warning list after [ FIRST STEP ] * * --> [! ] [Species] [raised 4 times] * particles.nspecies is ignored. Just use particles.species_names please. * @ Raised by: ALL * ******************************************************************************** STEP 1 ends. TIME = 7.703332806e-16 DT = 7.703332806e-16 Evolve time = 0.874033958 s; This step = 0.874033958 s; Avg. per step = 0.874033958 s STEP 2 starts ... STEP 2 ends. TIME = 1.540666561e-15 DT = 7.703332806e-16 Evolve time = 1.488798587 s; This step = 0.614764629 s; Avg. per step = 0.7443992935 s STEP 3 starts ... STEP 3 ends. TIME = 2.310999842e-15 DT = 7.703332806e-16 Evolve time = 2.170744846 s; This step = 0.681946259 s; Avg. per step = 0.7235816153 s --- INFO : Writing plotfile diags/plt000003 Total Time : 2.552089857 TinyProfiler total time across processes [min...avg...max]: 2.561 ... 2.562 ... 2.562 -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- WarpX::OneStep_nosub() 3 1.028 1.055 1.075 41.96% FabArray::setVal() 177 0.3225 0.3307 0.3387 13.22% WarpX::MacroscopicEvolveE() 3 0.2893 0.3144 0.3382 13.20% amrex::Copy() 144 0.2521 0.2554 0.2619 10.22% FabArray::ParallelCopy_finish() 144 0.01101 0.06999 0.1217 4.75% FabArray::LinComb() 72 0.07656 0.09788 0.1183 4.62% WarpX::EvolveB() 6 0.07754 0.08815 0.1004 3.92% FabArray::ParallelCopy_nowait() 144 0.08872 0.09001 0.09074 3.54% sample::Coarsen() 12 0.08389 0.08445 0.08585 3.35% FillBoundary_finish() 144 0.005634 0.02903 0.04632 1.81% WarpX::InitData() 1 0.03286 0.03578 0.03887 1.52% VisMF::Write(FabArray) 2 0.03417 0.03463 0.03517 1.37% PML::Exchange 72 0.02215 0.02361 0.02579 1.01% FillBoundary_nowait() 144 0.01575 0.02026 0.02482 0.97% WarpX::DampPML() 3 0.008909 0.01456 0.02005 0.78% WriteMultiLevelPlotfile() 2 3.152e-05 0.001494 0.002469 0.10% main() 1 0.001511 0.001806 0.002009 0.08% FlushFormatPlotfile::WriteToFile() 2 3.519e-05 0.0002107 0.0007218 0.03% WarpX::Evolve::step 3 0.00022 0.0004126 0.0006483 0.03% FabArray::ParallelCopy() 144 0.0003439 0.0004265 0.0005077 0.02% ablastr::utils::communication::ParallelCopy 144 0.0003513 0.0004222 0.0004903 0.02% MultiFab::Copy() 72 0.0002164 0.0002682 0.0003839 0.01% ablastr::utils::communication::FillBoundary 144 0.0002146 0.0002476 0.0002809 0.01% FabArray::FillBoundary() 126 0.000137 0.0001452 0.0001525 0.01% Diagnostics::FilterComputePackFlush() 5 9.872e-05 0.000104 0.0001144 0.00% ablastr::utils::communication::OverrideSync 18 1.377e-05 2.35e-05 3.27e-05 0.00% FAbArray::OverrideSync() 18 1.494e-05 2.035e-05 2.479e-05 0.00% OverrideSync_finish() 18 1.016e-05 1.192e-05 1.395e-05 0.00% WarpX::Evolve() 1 2.656e-06 3.371e-06 4.435e-06 0.00% REG::WarpX::Evolve() 1 2.336e-06 2.497e-06 2.719e-06 0.00% Other 440 0.001276 0.002832 0.00444 0.17% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- main() 1 2.552 2.552 2.552 99.60% REG::WarpX::Evolve() 1 2.293 2.293 2.293 89.50% WarpX::Evolve() 1 2.293 2.293 2.293 89.50% WarpX::Evolve::step 3 2.171 2.171 2.172 84.76% WarpX::OneStep_nosub() 3 1.904 1.904 1.904 74.33% PML::Exchange 72 0.7575 0.7996 0.8366 32.65% FabArray::setVal() 177 0.3225 0.3307 0.3387 13.22% WarpX::MacroscopicEvolveE() 3 0.2893 0.3144 0.3382 13.20% Diagnostics::FilterComputePackFlush() 5 0.2609 0.2718 0.2831 11.05% amrex::Copy() 144 0.2521 0.2554 0.2619 10.22% WarpX::InitData() 1 0.2569 0.2572 0.2578 10.06% ablastr::utils::communication::ParallelCopy 144 0.1031 0.1617 0.2138 8.34% FabArray::ParallelCopy() 144 0.1028 0.1613 0.2133 8.33% MultiFab::Copy() 72 0.1239 0.1275 0.1323 5.16% FabArray::ParallelCopy_finish() 144 0.01101 0.06999 0.1217 4.75% FabArray::LinComb() 72 0.07656 0.09788 0.1183 4.62% WarpX::EvolveB() 6 0.07754 0.08815 0.1004 3.92% FabArray::ParallelCopy_nowait() 144 0.08957 0.09083 0.09143 3.57% sample::Coarsen() 12 0.08389 0.08445 0.08585 3.35% FillBoundary_finish() 144 0.005634 0.02903 0.04632 1.81% ablastr::utils::communication::OverrideSync 18 0.0008711 0.02024 0.04107 1.60% FAbArray::OverrideSync() 18 0.0008573 0.02021 0.04104 1.60% OverrideSync_finish() 18 0.0001886 0.01954 0.04021 1.57% FlushFormatPlotfile::WriteToFile() 2 0.03466 0.03639 0.0378 1.48% WriteMultiLevelPlotfile() 2 0.03462 0.03618 0.03708 1.45% VisMF::Write(FabArray) 2 0.03417 0.03463 0.03517 1.37% ablastr::utils::communication::FillBoundary 144 0.02943 0.03002 0.03062 1.20% FabArray::FillBoundary() 126 0.02619 0.02733 0.02832 1.11% FillBoundary_nowait() 144 0.0162 0.02072 0.02527 0.99% WarpX::DampPML() 3 0.008909 0.01456 0.02005 0.78% Other 440 0.006251 0.01271 0.01906 0.74% -------------------------------------------------------------------------------------------- BEGIN REGION WarpX::Evolve() -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- WarpX::OneStep_nosub() 3 1.028 1.055 1.075 41.96% WarpX::MacroscopicEvolveE() 3 0.2893 0.3144 0.3382 13.20% amrex::Copy() 132 0.2324 0.2358 0.2418 9.44% FabArray::setVal() 132 0.2299 0.2327 0.2371 9.25% FabArray::LinComb() 66 0.07116 0.09055 0.1095 4.27% WarpX::EvolveB() 6 0.07754 0.08815 0.1004 3.92% FabArray::ParallelCopy_finish() 132 0.008006 0.05386 0.09353 3.65% FabArray::ParallelCopy_nowait() 132 0.08105 0.08246 0.08308 3.24% FillBoundary_finish() 132 0.005182 0.02817 0.04584 1.79% sample::Coarsen() 6 0.03602 0.03635 0.03724 1.45% PML::Exchange 66 0.01957 0.02083 0.02283 0.89% FillBoundary_nowait() 132 0.01445 0.01859 0.02278 0.89% WarpX::DampPML() 3 0.008909 0.01456 0.02005 0.78% VisMF::Write(FabArray) 1 0.01769 0.01784 0.01805 0.70% WriteMultiLevelPlotfile() 1 1.488e-05 0.0009173 0.001389 0.05% WarpX::Evolve::step 3 0.00022 0.0004126 0.0006483 0.03% FabArray::ParallelCopy() 132 0.0003196 0.0003942 0.0004661 0.02% ablastr::utils::communication::ParallelCopy 132 0.0003288 0.0003976 0.0004637 0.02% MultiFab::Copy() 66 0.0002025 0.0002555 0.0003727 0.01% ablastr::utils::communication::FillBoundary 132 0.0002 0.0002301 0.0002611 0.01% FlushFormatPlotfile::WriteToFile() 1 1.282e-05 7.25e-05 0.0002456 0.01% FabArray::FillBoundary() 114 0.0001279 0.0001351 0.0001428 0.01% Diagnostics::FilterComputePackFlush() 4 5.223e-05 5.417e-05 5.559e-05 0.00% ablastr::utils::communication::OverrideSync 18 1.377e-05 2.35e-05 3.27e-05 0.00% FAbArray::OverrideSync() 18 1.494e-05 2.035e-05 2.479e-05 0.00% OverrideSync_finish() 18 1.016e-05 1.192e-05 1.395e-05 0.00% WarpX::Evolve() 1 2.656e-06 3.371e-06 4.435e-06 0.00% REG::WarpX::Evolve() 1 2.336e-06 2.497e-06 2.719e-06 0.00% Other 368 0.0008484 0.001039 0.001342 0.05% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- REG::WarpX::Evolve() 1 2.293 2.293 2.293 89.50% WarpX::Evolve() 1 2.293 2.293 2.293 89.50% WarpX::Evolve::step 3 2.171 2.171 2.172 84.76% WarpX::OneStep_nosub() 3 1.904 1.904 1.904 74.33% PML::Exchange 66 0.6863 0.7179 0.7449 29.07% WarpX::MacroscopicEvolveE() 3 0.2893 0.3144 0.3382 13.20% amrex::Copy() 132 0.2324 0.2358 0.2418 9.44% FabArray::setVal() 132 0.2299 0.2327 0.2371 9.25% ablastr::utils::communication::ParallelCopy 132 0.09224 0.1377 0.1782 6.96% FabArray::ParallelCopy() 132 0.09191 0.1373 0.1778 6.94% MultiFab::Copy() 66 0.115 0.1188 0.1231 4.80% Diagnostics::FilterComputePackFlush() 4 0.1215 0.1217 0.122 4.76% FabArray::LinComb() 66 0.07116 0.09055 0.1095 4.27% WarpX::EvolveB() 6 0.07754 0.08815 0.1004 3.92% FabArray::ParallelCopy_finish() 132 0.008006 0.05386 0.09353 3.65% FabArray::ParallelCopy_nowait() 132 0.08169 0.08307 0.08378 3.27% FillBoundary_finish() 132 0.005182 0.02817 0.04584 1.79% ablastr::utils::communication::OverrideSync 18 0.0008711 0.02024 0.04107 1.60% FAbArray::OverrideSync() 18 0.0008573 0.02021 0.04104 1.60% OverrideSync_finish() 18 0.0001886 0.01954 0.04021 1.57% sample::Coarsen() 6 0.03602 0.03635 0.03724 1.45% ablastr::utils::communication::FillBoundary 132 0.0267 0.02732 0.02791 1.09% FabArray::FillBoundary() 114 0.02349 0.02464 0.02566 1.00% FillBoundary_nowait() 132 0.01478 0.0189 0.02307 0.90% WarpX::DampPML() 3 0.008909 0.01456 0.02005 0.78% FlushFormatPlotfile::WriteToFile() 1 0.01779 0.01887 0.01945 0.76% WriteMultiLevelPlotfile() 1 0.01777 0.01879 0.01921 0.75% VisMF::Write(FabArray) 1 0.01769 0.01784 0.01805 0.70% Other 368 0.005348 0.006651 0.00829 0.32% -------------------------------------------------------------------------------------------- END REGION WarpX::Evolve() Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [roger_pec_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.TP(nvals = 1) :: [5.4545e-10] [TOP]::my_constants.dx(nvals = 3) :: [Lx, /, nx] [TOP]::my_constants.dy(nvals = 3) :: [Ly, /, ny] [TOP]::my_constants.dz(nvals = 3) :: [Lz, /, nz] [TOP]::my_constants.eps_r_nb(nvals = 1) :: [13.] [TOP]::my_constants.flag_none(nvals = 1) :: [0] [TOP]::my_constants.flag_ss(nvals = 1) :: [2] [TOP]::my_constants.mu_r_nb(nvals = 1) :: [1.0] [TOP]::my_constants.sigma_nb(nvals = 1) :: [1.e7] [TOP]::plt(nvals = 1) :: [roger_pec_plt] Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 4 5 B 5 B 7 B 8192 KiB 8192 KiB 8192 KiB main() 280 3306 B 3307 B 3309 B 3584 B 3584 B 3584 B WarpX::OneStep_nosub() 24 2220 B 2221 B 2222 B 2560 B 2560 B 2560 B WarpX::InitData() 12 736 B 738 B 741 B 768 B 768 B 768 B Unprofiled 88 0 B 0 B 0 B 256 B 256 B 256 B -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------- WarpX::InitData() 286 152 MiB 167 MiB 182 MiB 155 MiB 171 MiB 187 MiB PML::Exchange 1296 3181 KiB 3253 KiB 3301 KiB 10 MiB 10 MiB 11 MiB FillBoundary_nowait() 1074 3267 B 4269 B 5688 B 391 KiB 394 KiB 395 KiB FabArray::ParallelCopy_nowait() 1152 2973 B 3173 B 3392 B 86 KiB 104 KiB 122 KiB --------------------------------------------------------------------------------------------------------------- AMReX (26.09-136-g53fb957f5e13) finalized