Initializing AMReX (26.09-155-g14ffe112f87b)... MPI initialized with 4 MPI processes MPI initialized with thread support level 3 AMReX (26.09-155-g14ffe112f87b) initialized WarpX (4fa5cde3d7bd) _____ __ .__ / _ \________/ |_ ____ _____ |__| ______ / /_\ \_ __ \ __\/ __ \ / \| |/ ___/ / | \ | \/| | \ ___/| Y Y \ |\___ \ \____|__ /__| |__| \___ >__|_| /__/____ > \/ \/ \/ \/ Level 0: dt = 7.703332806e-16 ; dx = 5e-07 ; dy = 5e-07 ; dz = 5e-07 --- INFO : we are in init data of macro Grids Summary: Level 0 4 grids 2097152 cells 100 % of domain smallest grid: 128 x 64 x 64 biggest grid: 128 x 64 x 64 ------------------------------------------------------------------------------- --------------------------- MAIN EM PIC PARAMETERS ---------------------------- ------------------------------------------------------------------------------- Precision: | DOUBLE Particle precision: | DOUBLE Geometry: | 3D (XYZ) Operation mode: | Electromagnetic | - macroscopic | - Lax-Wendroff algorithm ------------------------------------------------------------------------------- Current Deposition: | Esirkepov Particle Pusher: | Boris Charge Deposition: | standard Field Gathering: | energy-conserving Particle Shape Factor:| 0 ------------------------------------------------------------------------------- Maxwell Solver: | Yee ------------------------------------------------------------------------------- For full input parameters, see the file: warpx_used_inputs --- INFO : Writing plotfile diags/plt000000 STEP 1 starts ... Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [roger_pec_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.TP(nvals = 1) :: [5.4545e-10] [TOP]::my_constants.dx(nvals = 3) :: [Lx, /, nx] [TOP]::my_constants.dy(nvals = 3) :: [Ly, /, ny] [TOP]::my_constants.dz(nvals = 3) :: [Lz, /, nz] [TOP]::my_constants.eps_r_nb(nvals = 1) :: [13.] [TOP]::my_constants.flag_none(nvals = 1) :: [0] [TOP]::my_constants.flag_ss(nvals = 1) :: [2] [TOP]::my_constants.mu_r_nb(nvals = 1) :: [1.0] [TOP]::my_constants.sigma_nb(nvals = 1) :: [1.e7] [TOP]::plt(nvals = 1) :: [roger_pec_plt] **** WARNINGS ****************************************************************** * GLOBAL warning list after [ FIRST STEP ] * * --> [! ] [Species] [raised 4 times] * particles.nspecies is ignored. Just use particles.species_names please. * @ Raised by: ALL * ******************************************************************************** STEP 1 ends. TIME = 7.703332806e-16 DT = 7.703332806e-16 Evolve time = 0.884587768 s; This step = 0.884587768 s; Avg. per step = 0.884587768 s STEP 2 starts ... STEP 2 ends. TIME = 1.540666561e-15 DT = 7.703332806e-16 Evolve time = 1.503427023 s; This step = 0.618839255 s; Avg. per step = 0.7517135115 s STEP 3 starts ... STEP 3 ends. TIME = 2.310999842e-15 DT = 7.703332806e-16 Evolve time = 2.187941728 s; This step = 0.684514705 s; Avg. per step = 0.7293139093 s --- INFO : Writing plotfile diags/plt000003 Total Time : 2.575951259 TinyProfiler total time across processes [min...avg...max]: 2.58 ... 2.583 ... 2.588 -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- WarpX::OneStep_nosub() 3 1.035 1.069 1.09 42.12% FabArray::setVal() 177 0.3167 0.33 0.3425 13.24% WarpX::MacroscopicEvolveE() 3 0.2875 0.3146 0.3383 13.07% amrex::Copy() 144 0.2495 0.2559 0.2641 10.21% FabArray::ParallelCopy_finish() 144 0.0159 0.07388 0.1397 5.40% FabArray::LinComb() 72 0.07657 0.0977 0.1191 4.60% WarpX::EvolveB() 6 0.0757 0.0867 0.09402 3.63% FabArray::ParallelCopy_nowait() 144 0.08945 0.09073 0.09212 3.56% sample::Coarsen() 12 0.08456 0.08517 0.08593 3.32% FillBoundary_finish() 144 0.01288 0.03141 0.07575 2.93% WarpX::InitData() 1 0.03257 0.03588 0.03879 1.50% VisMF::Write(FabArray) 2 0.03428 0.03475 0.03564 1.38% PML::Exchange 72 0.02218 0.02389 0.02529 0.98% FillBoundary_nowait() 144 0.01526 0.02012 0.02523 0.97% WarpX::DampPML() 3 0.008412 0.01256 0.01633 0.63% main() 1 0.001112 0.001754 0.002242 0.09% WriteMultiLevelPlotfile() 2 0.0002054 0.001283 0.00184 0.07% FlushFormatPlotfile::WriteToFile() 2 3.532e-05 0.0001868 0.0006304 0.02% FabArray::ParallelCopy() 144 0.0003715 0.0004361 0.0005006 0.02% ablastr::utils::communication::ParallelCopy 144 0.0004321 0.0004551 0.0004961 0.02% WarpX::Evolve::step 3 0.0001923 0.0003075 0.0004575 0.02% ablastr::utils::communication::FillBoundary 144 0.0002295 0.0002469 0.0002653 0.01% MultiFab::Copy() 72 0.0002221 0.0002384 0.0002546 0.01% FabArray::FillBoundary() 126 0.0001331 0.000145 0.0001601 0.01% Diagnostics::FilterComputePackFlush() 5 9.089e-05 0.0001054 0.0001205 0.00% ablastr::utils::communication::OverrideSync 18 1.91e-05 2.238e-05 2.486e-05 0.00% FAbArray::OverrideSync() 18 1.685e-05 1.924e-05 2.258e-05 0.00% OverrideSync_finish() 18 1.02e-05 1.224e-05 1.496e-05 0.00% AmrMesh::MakeDistributionMap() 1 1.539e-06 4.627e-06 8.112e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.367e-06 4.526e-06 5.841e-06 0.00% WarpX::Evolve() 1 2.888e-06 3.223e-06 3.932e-06 0.00% REG::WarpX::Evolve() 1 1.73e-06 2.317e-06 2.992e-06 0.00% Other 438 0.001333 0.005359 0.009874 0.38% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- main() 1 2.57 2.573 2.576 99.55% REG::WarpX::Evolve() 1 2.311 2.311 2.311 89.31% WarpX::Evolve() 1 2.311 2.311 2.311 89.31% WarpX::Evolve::step 3 2.188 2.189 2.189 84.59% WarpX::OneStep_nosub() 3 1.919 1.92 1.92 74.19% PML::Exchange 72 0.7607 0.8027 0.8509 32.88% FabArray::setVal() 177 0.3167 0.33 0.3425 13.24% WarpX::MacroscopicEvolveE() 3 0.2875 0.3146 0.3383 13.07% Diagnostics::FilterComputePackFlush() 5 0.2609 0.2715 0.2824 10.91% amrex::Copy() 144 0.2495 0.2559 0.2641 10.21% WarpX::InitData() 1 0.257 0.2606 0.2633 10.18% ablastr::utils::communication::ParallelCopy 144 0.1096 0.1664 0.2311 8.93% FabArray::ParallelCopy() 144 0.1091 0.1659 0.2306 8.91% FabArray::ParallelCopy_finish() 144 0.0159 0.07388 0.1397 5.40% MultiFab::Copy() 72 0.1198 0.1271 0.1334 5.16% FabArray::LinComb() 72 0.07657 0.0977 0.1191 4.60% WarpX::EvolveB() 6 0.0757 0.0867 0.09402 3.63% FabArray::ParallelCopy_nowait() 144 0.09037 0.09161 0.09287 3.59% sample::Coarsen() 12 0.08456 0.08517 0.08593 3.32% FillBoundary_finish() 144 0.01288 0.03141 0.07575 2.93% ablastr::utils::communication::OverrideSync 18 0.007901 0.02182 0.06181 2.39% FAbArray::OverrideSync() 18 0.00788 0.0218 0.06179 2.39% OverrideSync_finish() 18 0.007173 0.02113 0.06117 2.36% FlushFormatPlotfile::WriteToFile() 2 0.03593 0.03628 0.03672 1.42% WriteMultiLevelPlotfile() 2 0.03589 0.03609 0.03626 1.40% VisMF::Write(FabArray) 2 0.03428 0.03475 0.03564 1.38% ablastr::utils::communication::FillBoundary 144 0.03015 0.03066 0.03116 1.20% FabArray::FillBoundary() 126 0.02681 0.02777 0.02879 1.11% FillBoundary_nowait() 144 0.01573 0.02057 0.02568 0.99% WarpX::DampPML() 3 0.008412 0.01256 0.01633 0.63% AmrMesh::MakeDistributionMap() 1 2.02e-05 0.0033 0.006118 0.24% DistributionMapping::SFCProcessorMapDoIt() 1 1.866e-05 0.003295 0.00611 0.24% Other 438 0.006623 0.01321 0.02288 0.88% -------------------------------------------------------------------------------------------- BEGIN REGION WarpX::Evolve() -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- WarpX::OneStep_nosub() 3 1.035 1.069 1.09 42.12% WarpX::MacroscopicEvolveE() 3 0.2875 0.3146 0.3383 13.07% amrex::Copy() 132 0.2303 0.2357 0.2434 9.41% FabArray::setVal() 132 0.2286 0.2317 0.2332 9.01% FabArray::ParallelCopy_finish() 132 0.01135 0.05899 0.1119 4.32% FabArray::LinComb() 66 0.0702 0.08986 0.1101 4.25% WarpX::EvolveB() 6 0.0757 0.0867 0.09402 3.63% FabArray::ParallelCopy_nowait() 132 0.08223 0.08333 0.08476 3.28% FillBoundary_finish() 132 0.01239 0.03049 0.07443 2.88% sample::Coarsen() 6 0.03629 0.03666 0.03713 1.43% FillBoundary_nowait() 132 0.01396 0.01847 0.02318 0.90% PML::Exchange 66 0.01971 0.02111 0.02256 0.87% VisMF::Write(FabArray) 1 0.01758 0.01785 0.01829 0.71% WriteMultiLevelPlotfile() 1 0.0001834 0.0005036 0.0008482 0.03% ablastr::utils::communication::ParallelCopy 132 0.0004017 0.0004284 0.0004664 0.02% FabArray::ParallelCopy() 132 0.0003473 0.0004071 0.0004654 0.02% WarpX::Evolve::step 3 0.0001923 0.0003075 0.0004575 0.02% ablastr::utils::communication::FillBoundary 132 0.0002128 0.000229 0.0002448 0.01% FlushFormatPlotfile::WriteToFile() 1 1.367e-05 7.233e-05 0.0002426 0.01% MultiFab::Copy() 66 0.0002108 0.0002252 0.0002407 0.01% FabArray::FillBoundary() 114 0.0001222 0.0001347 0.0001501 0.01% Diagnostics::FilterComputePackFlush() 4 5.231e-05 5.315e-05 5.417e-05 0.00% ablastr::utils::communication::OverrideSync 18 1.91e-05 2.238e-05 2.486e-05 0.00% FAbArray::OverrideSync() 18 1.685e-05 1.924e-05 2.258e-05 0.00% OverrideSync_finish() 18 1.02e-05 1.224e-05 1.496e-05 0.00% WarpX::Evolve() 1 2.888e-06 3.223e-06 3.932e-06 0.00% REG::WarpX::Evolve() 1 1.73e-06 2.317e-06 2.992e-06 0.00% Other 371 0.009302 0.01363 0.01765 0.68% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- REG::WarpX::Evolve() 1 2.311 2.311 2.311 89.31% WarpX::Evolve() 1 2.311 2.311 2.311 89.31% WarpX::Evolve::step 3 2.188 2.189 2.189 84.59% WarpX::OneStep_nosub() 3 1.919 1.92 1.92 74.19% PML::Exchange 66 0.6902 0.7224 0.7599 29.37% WarpX::MacroscopicEvolveE() 3 0.2875 0.3146 0.3383 13.07% amrex::Copy() 132 0.2303 0.2357 0.2434 9.41% FabArray::setVal() 132 0.2286 0.2317 0.2332 9.01% ablastr::utils::communication::ParallelCopy 132 0.09742 0.1438 0.1957 7.56% FabArray::ParallelCopy() 132 0.09702 0.1434 0.1953 7.55% MultiFab::Copy() 66 0.1112 0.1177 0.1236 4.78% Diagnostics::FilterComputePackFlush() 4 0.1217 0.1221 0.1226 4.74% FabArray::ParallelCopy_finish() 132 0.01135 0.05899 0.1119 4.32% FabArray::LinComb() 66 0.0702 0.08986 0.1101 4.25% WarpX::EvolveB() 6 0.0757 0.0867 0.09402 3.63% FabArray::ParallelCopy_nowait() 132 0.08294 0.08399 0.08532 3.30% FillBoundary_finish() 132 0.01239 0.03049 0.07443 2.88% ablastr::utils::communication::OverrideSync 18 0.007901 0.02182 0.06181 2.39% FAbArray::OverrideSync() 18 0.00788 0.0218 0.06179 2.39% OverrideSync_finish() 18 0.007173 0.02113 0.06117 2.36% sample::Coarsen() 6 0.03629 0.03666 0.03713 1.43% ablastr::utils::communication::FillBoundary 132 0.0274 0.02791 0.02843 1.10% FabArray::FillBoundary() 114 0.02405 0.02503 0.02608 1.01% FillBoundary_nowait() 132 0.0143 0.01877 0.02347 0.91% FlushFormatPlotfile::WriteToFile() 1 0.01816 0.01846 0.01884 0.73% WriteMultiLevelPlotfile() 1 0.01815 0.01838 0.01859 0.72% VisMF::Write(FabArray) 1 0.01758 0.01785 0.01829 0.71% Other 371 0.01414 0.01962 0.02501 0.97% -------------------------------------------------------------------------------------------- END REGION WarpX::Evolve() Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [roger_pec_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.TP(nvals = 1) :: [5.4545e-10] [TOP]::my_constants.dx(nvals = 3) :: [Lx, /, nx] [TOP]::my_constants.dy(nvals = 3) :: [Ly, /, ny] [TOP]::my_constants.dz(nvals = 3) :: [Lz, /, nz] [TOP]::my_constants.eps_r_nb(nvals = 1) :: [13.] [TOP]::my_constants.flag_none(nvals = 1) :: [0] [TOP]::my_constants.flag_ss(nvals = 1) :: [2] [TOP]::my_constants.mu_r_nb(nvals = 1) :: [1.0] [TOP]::my_constants.sigma_nb(nvals = 1) :: [1.e7] [TOP]::plt(nvals = 1) :: [roger_pec_plt] Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 4 6 B 7 B 9 B 8192 KiB 8192 KiB 8192 KiB main() 280 3300 B 3304 B 3310 B 3584 B 3584 B 3584 B WarpX::OneStep_nosub() 24 2216 B 2218 B 2220 B 2560 B 2560 B 2560 B WarpX::InitData() 12 734 B 736 B 739 B 768 B 768 B 768 B Unprofiled 88 0 B 0 B 0 B 256 B 256 B 256 B -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------- WarpX::InitData() 286 151 MiB 166 MiB 182 MiB 155 MiB 171 MiB 187 MiB PML::Exchange 1296 3168 KiB 3236 KiB 3330 KiB 10 MiB 10 MiB 11 MiB FillBoundary_nowait() 1074 3410 B 4260 B 4711 B 391 KiB 394 KiB 395 KiB FabArray::ParallelCopy_nowait() 1152 2983 B 3197 B 3379 B 86 KiB 104 KiB 122 KiB --------------------------------------------------------------------------------------------------------------- AMReX (26.09-155-g14ffe112f87b) finalized