Initializing AMReX (26.09-166-g29e408043123)... MPI initialized with 4 MPI processes MPI initialized with thread support level 3 AMReX (26.09-166-g29e408043123) initialized WarpX (4fa5cde3d7bd) _____ __ .__ / _ \________/ |_ ____ _____ |__| ______ / /_\ \_ __ \ __\/ __ \ / \| |/ ___/ / | \ | \/| | \ ___/| Y Y \ |\___ \ \____|__ /__| |__| \___ >__|_| /__/____ > \/ \/ \/ \/ Level 0: dt = 7.703332806e-16 ; dx = 5e-07 ; dy = 5e-07 ; dz = 5e-07 --- INFO : we are in init data of macro Grids Summary: Level 0 4 grids 2097152 cells 100 % of domain smallest grid: 128 x 64 x 64 biggest grid: 128 x 64 x 64 ------------------------------------------------------------------------------- --------------------------- MAIN EM PIC PARAMETERS ---------------------------- ------------------------------------------------------------------------------- Precision: | DOUBLE Particle precision: | DOUBLE Geometry: | 3D (XYZ) Operation mode: | Electromagnetic | - macroscopic | - Lax-Wendroff algorithm ------------------------------------------------------------------------------- Current Deposition: | Esirkepov Particle Pusher: | Boris Charge Deposition: | standard Field Gathering: | energy-conserving Particle Shape Factor:| 0 ------------------------------------------------------------------------------- Maxwell Solver: | Yee ------------------------------------------------------------------------------- For full input parameters, see the file: warpx_used_inputs --- INFO : Writing plotfile diags/plt000000 STEP 1 starts ... Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [roger_pec_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.TP(nvals = 1) :: [5.4545e-10] [TOP]::my_constants.dx(nvals = 3) :: [Lx, /, nx] [TOP]::my_constants.dy(nvals = 3) :: [Ly, /, ny] [TOP]::my_constants.dz(nvals = 3) :: [Lz, /, nz] [TOP]::my_constants.eps_r_nb(nvals = 1) :: [13.] [TOP]::my_constants.flag_none(nvals = 1) :: [0] [TOP]::my_constants.flag_ss(nvals = 1) :: [2] [TOP]::my_constants.mu_r_nb(nvals = 1) :: [1.0] [TOP]::my_constants.sigma_nb(nvals = 1) :: [1.e7] [TOP]::plt(nvals = 1) :: [roger_pec_plt] **** WARNINGS ****************************************************************** * GLOBAL warning list after [ FIRST STEP ] * * --> [! ] [Species] [raised 4 times] * particles.nspecies is ignored. Just use particles.species_names please. * @ Raised by: ALL * ******************************************************************************** STEP 1 ends. TIME = 7.703332806e-16 DT = 7.703332806e-16 Evolve time = 0.865428826 s; This step = 0.865428826 s; Avg. per step = 0.865428826 s STEP 2 starts ... STEP 2 ends. TIME = 1.540666561e-15 DT = 7.703332806e-16 Evolve time = 1.50218992 s; This step = 0.636761094 s; Avg. per step = 0.75109496 s STEP 3 starts ... STEP 3 ends. TIME = 2.310999842e-15 DT = 7.703332806e-16 Evolve time = 2.178492077 s; This step = 0.676302157 s; Avg. per step = 0.7261640257 s --- INFO : Writing plotfile diags/plt000003 Total Time : 2.628291143 TinyProfiler total time across processes [min...avg...max]: 2.636 ... 2.638 ... 2.641 -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- WarpX::OneStep_nosub() 3 0.9967 1.029 1.056 40.00% FabArray::setVal() 177 0.3257 0.3342 0.3442 13.04% WarpX::MacroscopicEvolveE() 3 0.296 0.3301 0.344 13.03% amrex::Copy() 144 0.2467 0.2549 0.2647 10.03% FabArray::ParallelCopy_finish() 144 0.08725 0.1323 0.2153 8.15% FabArray::LinComb() 72 0.07621 0.09725 0.1175 4.45% WarpX::InitData() 1 0.03158 0.05435 0.1125 4.26% FabArray::ParallelCopy_nowait() 144 0.08719 0.09021 0.09415 3.57% WarpX::EvolveB() 6 0.08042 0.08479 0.09025 3.42% sample::Coarsen() 12 0.0857 0.08628 0.08695 3.29% FillBoundary_finish() 144 0.009906 0.03501 0.06223 2.36% VisMF::Write(FabArray) 2 0.03476 0.03579 0.03708 1.40% PML::Exchange 72 0.02271 0.0243 0.02564 0.97% FillBoundary_nowait() 144 0.01592 0.02047 0.02489 0.94% WarpX::DampPML() 3 0.006963 0.01027 0.01384 0.52% main() 1 0.00133 0.001912 0.00233 0.09% WriteMultiLevelPlotfile() 2 0.0009172 0.00149 0.002011 0.08% FlushFormatPlotfile::WriteToFile() 2 3.656e-05 0.0002438 0.0006951 0.03% FabArray::ParallelCopy() 144 0.0003764 0.0004392 0.0005101 0.02% ablastr::utils::communication::ParallelCopy 144 0.0004051 0.0004438 0.0004963 0.02% WarpX::Evolve::step 3 0.0002001 0.0003131 0.0004613 0.02% ablastr::utils::communication::FillBoundary 144 0.0002229 0.0002919 0.0004107 0.02% MultiFab::Copy() 72 0.0002211 0.0002297 0.0002429 0.01% FabArray::FillBoundary() 126 0.0001409 0.0001456 0.0001523 0.01% Diagnostics::FilterComputePackFlush() 5 0.000103 0.0001105 0.0001208 0.00% ablastr::utils::communication::OverrideSync 18 1.749e-05 2.385e-05 2.982e-05 0.00% FAbArray::OverrideSync() 18 1.504e-05 1.955e-05 2.269e-05 0.00% OverrideSync_finish() 18 1.006e-05 1.19e-05 1.39e-05 0.00% WarpX::Evolve() 1 2.577e-06 3.298e-06 4.773e-06 0.00% REG::WarpX::Evolve() 1 2.209e-06 2.734e-06 3.333e-06 0.00% Other 440 0.00134 0.002741 0.004025 0.15% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- main() 1 2.627 2.628 2.628 99.54% REG::WarpX::Evolve() 1 2.302 2.302 2.303 87.21% WarpX::Evolve() 1 2.302 2.302 2.303 87.21% WarpX::Evolve::step 3 2.179 2.18 2.18 82.57% WarpX::OneStep_nosub() 3 1.91 1.91 1.911 72.36% PML::Exchange 72 0.8042 0.8609 0.9251 35.03% Diagnostics::FilterComputePackFlush() 5 0.2661 0.3166 0.3494 13.23% FabArray::setVal() 177 0.3257 0.3342 0.3442 13.04% WarpX::MacroscopicEvolveE() 3 0.296 0.3301 0.344 13.03% WarpX::InitData() 1 0.3222 0.3238 0.3252 12.31% ablastr::utils::communication::ParallelCopy 144 0.1762 0.2243 0.307 11.63% FabArray::ParallelCopy() 144 0.1758 0.2238 0.3066 11.61% amrex::Copy() 144 0.2467 0.2549 0.2647 10.03% FabArray::ParallelCopy_finish() 144 0.08725 0.1323 0.2153 8.15% MultiFab::Copy() 72 0.1211 0.1267 0.133 5.04% FabArray::LinComb() 72 0.07621 0.09725 0.1175 4.45% FabArray::ParallelCopy_nowait() 144 0.08809 0.09108 0.09496 3.60% WarpX::EvolveB() 6 0.08042 0.08479 0.09025 3.42% sample::Coarsen() 12 0.0857 0.08628 0.08695 3.29% FillBoundary_finish() 144 0.009906 0.03501 0.06223 2.36% ablastr::utils::communication::OverrideSync 18 0.003548 0.02614 0.04952 1.88% FAbArray::OverrideSync() 18 0.00353 0.02612 0.04949 1.87% OverrideSync_finish() 18 0.003002 0.02547 0.04892 1.85% FlushFormatPlotfile::WriteToFile() 2 0.03606 0.03759 0.03895 1.47% WriteMultiLevelPlotfile() 2 0.03603 0.03734 0.03825 1.45% VisMF::Write(FabArray) 2 0.03476 0.03579 0.03708 1.40% ablastr::utils::communication::FillBoundary 144 0.02991 0.03033 0.03085 1.17% FabArray::FillBoundary() 126 0.0267 0.02759 0.02847 1.08% FillBoundary_nowait() 144 0.01634 0.02091 0.02535 0.96% WarpX::DampPML() 3 0.006963 0.01027 0.01384 0.52% Other 440 0.006351 0.01134 0.01595 0.60% -------------------------------------------------------------------------------------------- BEGIN REGION WarpX::Evolve() -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- WarpX::OneStep_nosub() 3 0.9967 1.029 1.056 40.00% WarpX::MacroscopicEvolveE() 3 0.296 0.3301 0.344 13.03% amrex::Copy() 132 0.2268 0.2359 0.2459 9.31% FabArray::setVal() 132 0.229 0.2316 0.2347 8.89% FabArray::ParallelCopy_finish() 132 0.03565 0.07399 0.1242 4.70% FabArray::LinComb() 66 0.071 0.09013 0.1086 4.11% WarpX::EvolveB() 6 0.08042 0.08479 0.09025 3.42% FabArray::ParallelCopy_nowait() 132 0.08027 0.08296 0.08656 3.28% FillBoundary_finish() 132 0.009433 0.03414 0.061 2.31% sample::Coarsen() 6 0.03699 0.03737 0.03787 1.43% FillBoundary_nowait() 132 0.01467 0.0188 0.02284 0.86% PML::Exchange 66 0.01969 0.02132 0.02259 0.86% VisMF::Write(FabArray) 1 0.0174 0.01785 0.0184 0.70% WriteMultiLevelPlotfile() 1 2.119e-05 0.0006704 0.001024 0.04% FabArray::ParallelCopy() 132 0.000353 0.0004102 0.0004788 0.02% ablastr::utils::communication::ParallelCopy 132 0.0003824 0.0004175 0.0004672 0.02% WarpX::Evolve::step 3 0.0002001 0.0003131 0.0004613 0.02% ablastr::utils::communication::FillBoundary 132 0.0002066 0.0002735 0.0003909 0.01% FlushFormatPlotfile::WriteToFile() 1 1.257e-05 0.0001105 0.0002414 0.01% MultiFab::Copy() 66 0.0002081 0.0002166 0.0002289 0.01% FabArray::FillBoundary() 114 0.0001298 0.0001348 0.0001423 0.01% Diagnostics::FilterComputePackFlush() 4 5.351e-05 5.622e-05 5.926e-05 0.00% ablastr::utils::communication::OverrideSync 18 1.749e-05 2.385e-05 2.982e-05 0.00% FAbArray::OverrideSync() 18 1.504e-05 1.955e-05 2.269e-05 0.00% OverrideSync_finish() 18 1.006e-05 1.19e-05 1.39e-05 0.00% WarpX::Evolve() 1 2.577e-06 3.298e-06 4.773e-06 0.00% REG::WarpX::Evolve() 1 2.209e-06 2.734e-06 3.333e-06 0.00% Other 371 0.007832 0.01133 0.01519 0.58% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- REG::WarpX::Evolve() 1 2.302 2.302 2.303 87.21% WarpX::Evolve() 1 2.302 2.302 2.303 87.21% WarpX::Evolve::step 3 2.179 2.18 2.18 82.57% WarpX::OneStep_nosub() 3 1.91 1.91 1.911 72.36% PML::Exchange 66 0.7136 0.7376 0.7705 29.18% WarpX::MacroscopicEvolveE() 3 0.296 0.3301 0.344 13.03% amrex::Copy() 132 0.2268 0.2359 0.2459 9.31% FabArray::setVal() 132 0.229 0.2316 0.2347 8.89% ablastr::utils::communication::ParallelCopy 132 0.1236 0.1584 0.2084 7.89% FabArray::ParallelCopy() 132 0.1232 0.158 0.2079 7.87% MultiFab::Copy() 66 0.1121 0.1185 0.125 4.73% FabArray::ParallelCopy_finish() 132 0.03565 0.07399 0.1242 4.70% Diagnostics::FilterComputePackFlush() 4 0.1223 0.1227 0.1233 4.67% FabArray::LinComb() 66 0.071 0.09013 0.1086 4.11% WarpX::EvolveB() 6 0.08042 0.08479 0.09025 3.42% FabArray::ParallelCopy_nowait() 132 0.08095 0.08362 0.08717 3.30% FillBoundary_finish() 132 0.009433 0.03414 0.061 2.31% ablastr::utils::communication::OverrideSync 18 0.003548 0.02614 0.04952 1.88% FAbArray::OverrideSync() 18 0.00353 0.02612 0.04949 1.87% OverrideSync_finish() 18 0.003002 0.02547 0.04892 1.85% sample::Coarsen() 6 0.03699 0.03737 0.03787 1.43% ablastr::utils::communication::FillBoundary 132 0.02718 0.02762 0.02815 1.07% FabArray::FillBoundary() 114 0.024 0.0249 0.0258 0.98% FillBoundary_nowait() 132 0.01496 0.0191 0.02313 0.88% FlushFormatPlotfile::WriteToFile() 1 0.01836 0.01867 0.01891 0.72% WriteMultiLevelPlotfile() 1 0.01835 0.01856 0.01873 0.71% VisMF::Write(FabArray) 1 0.0174 0.01785 0.0184 0.70% Other 371 0.01234 0.01691 0.02195 0.83% -------------------------------------------------------------------------------------------- END REGION WarpX::Evolve() Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [roger_pec_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.TP(nvals = 1) :: [5.4545e-10] [TOP]::my_constants.dx(nvals = 3) :: [Lx, /, nx] [TOP]::my_constants.dy(nvals = 3) :: [Ly, /, ny] [TOP]::my_constants.dz(nvals = 3) :: [Lz, /, nz] [TOP]::my_constants.eps_r_nb(nvals = 1) :: [13.] [TOP]::my_constants.flag_none(nvals = 1) :: [0] [TOP]::my_constants.flag_ss(nvals = 1) :: [2] [TOP]::my_constants.mu_r_nb(nvals = 1) :: [1.0] [TOP]::my_constants.sigma_nb(nvals = 1) :: [1.e7] [TOP]::plt(nvals = 1) :: [roger_pec_plt] Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 4 6 B 6 B 6 B 8192 KiB 8192 KiB 8192 KiB main() 280 3305 B 3307 B 3310 B 3584 B 3584 B 3584 B WarpX::OneStep_nosub() 24 2162 B 2164 B 2166 B 2560 B 2560 B 2560 B WarpX::InitData() 12 735 B 736 B 740 B 768 B 768 B 768 B Unprofiled 88 0 B 0 B 0 B 256 B 256 B 256 B -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------- WarpX::InitData() 286 151 MiB 166 MiB 182 MiB 155 MiB 171 MiB 187 MiB PML::Exchange 1296 3075 KiB 3418 KiB 3560 KiB 10 MiB 10 MiB 11 MiB FillBoundary_nowait() 1074 3164 B 4359 B 5715 B 391 KiB 394 KiB 395 KiB FabArray::ParallelCopy_nowait() 1152 2640 B 3635 B 4239 B 86 KiB 104 KiB 122 KiB --------------------------------------------------------------------------------------------------------------- AMReX (26.09-166-g29e408043123) finalized