Initializing AMReX (26.09-188-g2ceecb347bea)... MPI initialized with 4 MPI processes MPI initialized with thread support level 3 AMReX (26.09-188-g2ceecb347bea) initialized WarpX (4fa5cde3d7bd) _____ __ .__ / _ \________/ |_ ____ _____ |__| ______ / /_\ \_ __ \ __\/ __ \ / \| |/ ___/ / | \ | \/| | \ ___/| Y Y \ |\___ \ \____|__ /__| |__| \___ >__|_| /__/____ > \/ \/ \/ \/ Level 0: dt = 7.703332806e-16 ; dx = 5e-07 ; dy = 5e-07 ; dz = 5e-07 --- INFO : we are in init data of macro Grids Summary: Level 0 4 grids 2097152 cells 100 % of domain smallest grid: 128 x 64 x 64 biggest grid: 128 x 64 x 64 ------------------------------------------------------------------------------- --------------------------- MAIN EM PIC PARAMETERS ---------------------------- ------------------------------------------------------------------------------- Precision: | DOUBLE Particle precision: | DOUBLE Geometry: | 3D (XYZ) Operation mode: | Electromagnetic | - macroscopic | - Lax-Wendroff algorithm ------------------------------------------------------------------------------- Current Deposition: | Esirkepov Particle Pusher: | Boris Charge Deposition: | standard Field Gathering: | energy-conserving Particle Shape Factor:| 0 ------------------------------------------------------------------------------- Maxwell Solver: | Yee ------------------------------------------------------------------------------- For full input parameters, see the file: warpx_used_inputs --- INFO : Writing plotfile diags/plt000000 STEP 1 starts ... Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [roger_pec_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.TP(nvals = 1) :: [5.4545e-10] [TOP]::my_constants.dx(nvals = 3) :: [Lx, /, nx] [TOP]::my_constants.dy(nvals = 3) :: [Ly, /, ny] [TOP]::my_constants.dz(nvals = 3) :: [Lz, /, nz] [TOP]::my_constants.eps_r_nb(nvals = 1) :: [13.] [TOP]::my_constants.flag_none(nvals = 1) :: [0] [TOP]::my_constants.flag_ss(nvals = 1) :: [2] [TOP]::my_constants.mu_r_nb(nvals = 1) :: [1.0] [TOP]::my_constants.sigma_nb(nvals = 1) :: [1.e7] [TOP]::plt(nvals = 1) :: [roger_pec_plt] **** WARNINGS ****************************************************************** * GLOBAL warning list after [ FIRST STEP ] * * --> [! ] [Species] [raised 4 times] * particles.nspecies is ignored. Just use particles.species_names please. * @ Raised by: ALL * ******************************************************************************** STEP 1 ends. TIME = 7.703332806e-16 DT = 7.703332806e-16 Evolve time = 0.856944248 s; This step = 0.856944248 s; Avg. per step = 0.856944248 s STEP 2 starts ... STEP 2 ends. TIME = 1.540666561e-15 DT = 7.703332806e-16 Evolve time = 1.462883839 s; This step = 0.605939591 s; Avg. per step = 0.7314419195 s STEP 3 starts ... STEP 3 ends. TIME = 2.310999842e-15 DT = 7.703332806e-16 Evolve time = 2.135416212 s; This step = 0.672532373 s; Avg. per step = 0.711805404 s --- INFO : Writing plotfile diags/plt000003 Total Time : 2.518226203 TinyProfiler total time across processes [min...avg...max]: 2.527 ... 2.529 ... 2.531 -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- WarpX::OneStep_nosub() 3 0.9968 1.021 1.04 41.11% FabArray::setVal() 177 0.3216 0.3312 0.3421 13.51% WarpX::MacroscopicEvolveE() 3 0.289 0.3145 0.3383 13.37% amrex::Copy() 144 0.2465 0.2541 0.2667 10.54% FabArray::ParallelCopy_finish() 144 0.01785 0.07358 0.1261 4.98% FabArray::LinComb() 72 0.07731 0.09912 0.1209 4.78% WarpX::EvolveB() 6 0.07724 0.08593 0.09696 3.83% FabArray::ParallelCopy_nowait() 144 0.08825 0.09168 0.09345 3.69% sample::Coarsen() 12 0.08252 0.08292 0.08328 3.29% FillBoundary_finish() 144 0.007699 0.03075 0.05165 2.04% VisMF::Write(FabArray) 2 0.03461 0.0355 0.03668 1.45% WarpX::InitData() 1 0.03075 0.0333 0.03607 1.43% PML::Exchange 72 0.02272 0.02395 0.02551 1.01% FillBoundary_nowait() 144 0.0155 0.02024 0.02511 0.99% WarpX::DampPML() 3 0.007235 0.01263 0.02022 0.80% main() 1 0.001311 0.001882 0.002364 0.09% WriteMultiLevelPlotfile() 2 0.0004563 0.001103 0.001818 0.07% FlushFormatPlotfile::WriteToFile() 2 3.381e-05 0.0002104 0.0007175 0.03% WarpX::Evolve::step 3 0.0001962 0.0003298 0.000507 0.02% FabArray::ParallelCopy() 144 0.0003564 0.0004375 0.0004889 0.02% ablastr::utils::communication::ParallelCopy 144 0.0003941 0.0004398 0.0004705 0.02% ablastr::utils::communication::FillBoundary 144 0.0002241 0.0002463 0.0002805 0.01% MultiFab::Copy() 72 0.0002021 0.0002327 0.00025 0.01% FabArray::FillBoundary() 126 0.0001312 0.0001407 0.0001472 0.01% Diagnostics::FilterComputePackFlush() 5 0.0001062 0.0001134 0.0001221 0.00% ablastr::utils::communication::OverrideSync 18 1.728e-05 2.241e-05 3.169e-05 0.00% FAbArray::OverrideSync() 18 1.649e-05 1.967e-05 2.441e-05 0.00% OverrideSync_finish() 18 9.17e-06 1.22e-05 1.518e-05 0.00% WarpX::Evolve() 1 2.464e-06 3.006e-06 4.131e-06 0.00% REG::WarpX::Evolve() 1 2.363e-06 2.938e-06 3.711e-06 0.00% Other 440 0.001321 0.002323 0.004313 0.17% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- main() 1 2.518 2.518 2.518 99.49% REG::WarpX::Evolve() 1 2.258 2.258 2.258 89.23% WarpX::Evolve() 1 2.258 2.258 2.258 89.23% WarpX::Evolve::step 3 2.135 2.136 2.137 84.43% WarpX::OneStep_nosub() 3 1.869 1.869 1.87 73.86% PML::Exchange 72 0.7612 0.8031 0.8395 33.17% FabArray::setVal() 177 0.3216 0.3312 0.3421 13.51% WarpX::MacroscopicEvolveE() 3 0.289 0.3145 0.3383 13.37% Diagnostics::FilterComputePackFlush() 5 0.2623 0.2732 0.285 11.26% amrex::Copy() 144 0.2465 0.2541 0.2667 10.54% WarpX::InitData() 1 0.2576 0.2582 0.2592 10.24% ablastr::utils::communication::ParallelCopy 144 0.1128 0.167 0.2203 8.71% FabArray::ParallelCopy() 144 0.1124 0.1666 0.2199 8.69% MultiFab::Copy() 72 0.1208 0.1267 0.1348 5.33% FabArray::ParallelCopy_finish() 144 0.01785 0.07358 0.1261 4.98% FabArray::LinComb() 72 0.07731 0.09912 0.1209 4.78% WarpX::EvolveB() 6 0.07724 0.08593 0.09696 3.83% FabArray::ParallelCopy_nowait() 144 0.08913 0.09254 0.09423 3.72% sample::Coarsen() 12 0.08252 0.08292 0.08328 3.29% FillBoundary_finish() 144 0.007699 0.03075 0.05165 2.04% ablastr::utils::communication::OverrideSync 18 0.00303 0.02175 0.0384 1.52% FAbArray::OverrideSync() 18 0.003011 0.02173 0.03837 1.52% FlushFormatPlotfile::WriteToFile() 2 0.03611 0.03686 0.03807 1.50% OverrideSync_finish() 18 0.002299 0.02108 0.03782 1.49% WriteMultiLevelPlotfile() 2 0.03606 0.03665 0.03735 1.48% VisMF::Write(FabArray) 2 0.03461 0.0355 0.03668 1.45% ablastr::utils::communication::FillBoundary 144 0.02955 0.03019 0.03079 1.22% FabArray::FillBoundary() 126 0.02641 0.02743 0.0285 1.13% FillBoundary_nowait() 144 0.01597 0.0207 0.02558 1.01% WarpX::DampPML() 3 0.007235 0.01263 0.02022 0.80% Other 440 0.006332 0.01055 0.01864 0.74% -------------------------------------------------------------------------------------------- BEGIN REGION WarpX::Evolve() -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- WarpX::OneStep_nosub() 3 0.9968 1.021 1.04 41.11% WarpX::MacroscopicEvolveE() 3 0.289 0.3145 0.3383 13.37% amrex::Copy() 132 0.228 0.2348 0.2453 9.69% FabArray::setVal() 132 0.2282 0.2309 0.2321 9.17% FabArray::LinComb() 66 0.07189 0.09202 0.1126 4.45% WarpX::EvolveB() 6 0.07724 0.08593 0.09696 3.83% FabArray::ParallelCopy_finish() 132 0.01061 0.05494 0.09595 3.79% FabArray::ParallelCopy_nowait() 132 0.08119 0.08412 0.08575 3.39% FillBoundary_finish() 132 0.007165 0.02989 0.05058 2.00% sample::Coarsen() 6 0.03583 0.03601 0.03645 1.44% FillBoundary_nowait() 132 0.01381 0.01836 0.02294 0.91% PML::Exchange 66 0.01974 0.02093 0.02212 0.87% WarpX::DampPML() 3 0.007235 0.01263 0.02022 0.80% VisMF::Write(FabArray) 1 0.01782 0.01821 0.01868 0.74% WriteMultiLevelPlotfile() 1 1.406e-05 0.0005872 0.0009457 0.04% WarpX::Evolve::step 3 0.0001962 0.0003298 0.000507 0.02% FabArray::ParallelCopy() 132 0.0003264 0.0004082 0.0004567 0.02% ablastr::utils::communication::ParallelCopy 132 0.0003699 0.0004126 0.0004409 0.02% ablastr::utils::communication::FillBoundary 132 0.0002063 0.0002255 0.0002596 0.01% FlushFormatPlotfile::WriteToFile() 1 1.375e-05 7.606e-05 0.0002573 0.01% MultiFab::Copy() 66 0.0001902 0.0002198 0.0002365 0.01% FabArray::FillBoundary() 114 0.0001212 0.0001297 0.0001369 0.01% Diagnostics::FilterComputePackFlush() 4 5.515e-05 5.949e-05 6.81e-05 0.00% ablastr::utils::communication::OverrideSync 18 1.728e-05 2.241e-05 3.169e-05 0.00% FAbArray::OverrideSync() 18 1.649e-05 1.967e-05 2.441e-05 0.00% OverrideSync_finish() 18 9.17e-06 1.22e-05 1.518e-05 0.00% WarpX::Evolve() 1 2.464e-06 3.006e-06 4.131e-06 0.00% REG::WarpX::Evolve() 1 2.363e-06 2.938e-06 3.711e-06 0.00% Other 368 0.0008764 0.001056 0.001307 0.05% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- REG::WarpX::Evolve() 1 2.258 2.258 2.258 89.23% WarpX::Evolve() 1 2.258 2.258 2.258 89.23% WarpX::Evolve::step 3 2.135 2.136 2.137 84.43% WarpX::OneStep_nosub() 3 1.869 1.869 1.87 73.86% PML::Exchange 66 0.6872 0.7194 0.7458 29.46% WarpX::MacroscopicEvolveE() 3 0.289 0.3145 0.3383 13.37% amrex::Copy() 132 0.228 0.2348 0.2453 9.69% FabArray::setVal() 132 0.2282 0.2309 0.2321 9.17% ablastr::utils::communication::ParallelCopy 132 0.09764 0.1405 0.1822 7.20% FabArray::ParallelCopy() 132 0.09727 0.1401 0.1818 7.18% MultiFab::Copy() 66 0.113 0.1184 0.1253 4.95% Diagnostics::FilterComputePackFlush() 4 0.1212 0.1216 0.1222 4.83% FabArray::LinComb() 66 0.07189 0.09202 0.1126 4.45% WarpX::EvolveB() 6 0.07724 0.08593 0.09696 3.83% FabArray::ParallelCopy_finish() 132 0.01061 0.05494 0.09595 3.79% FabArray::ParallelCopy_nowait() 132 0.08186 0.08476 0.08634 3.41% FillBoundary_finish() 132 0.007165 0.02989 0.05058 2.00% ablastr::utils::communication::OverrideSync 18 0.00303 0.02175 0.0384 1.52% FAbArray::OverrideSync() 18 0.003011 0.02173 0.03837 1.52% OverrideSync_finish() 18 0.002299 0.02108 0.03782 1.49% sample::Coarsen() 6 0.03583 0.03601 0.03645 1.44% ablastr::utils::communication::FillBoundary 132 0.02661 0.02726 0.02786 1.10% FabArray::FillBoundary() 114 0.02349 0.02452 0.02561 1.01% FillBoundary_nowait() 132 0.01412 0.01867 0.02324 0.92% WarpX::DampPML() 3 0.007235 0.01263 0.02022 0.80% FlushFormatPlotfile::WriteToFile() 1 0.01857 0.0189 0.01909 0.75% WriteMultiLevelPlotfile() 1 0.01855 0.01882 0.01907 0.75% VisMF::Write(FabArray) 1 0.01782 0.01821 0.01868 0.74% Other 368 0.005414 0.006775 0.008463 0.33% -------------------------------------------------------------------------------------------- END REGION WarpX::Evolve() Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [roger_pec_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.TP(nvals = 1) :: [5.4545e-10] [TOP]::my_constants.dx(nvals = 3) :: [Lx, /, nx] [TOP]::my_constants.dy(nvals = 3) :: [Ly, /, ny] [TOP]::my_constants.dz(nvals = 3) :: [Lz, /, nz] [TOP]::my_constants.eps_r_nb(nvals = 1) :: [13.] [TOP]::my_constants.flag_none(nvals = 1) :: [0] [TOP]::my_constants.flag_ss(nvals = 1) :: [2] [TOP]::my_constants.mu_r_nb(nvals = 1) :: [1.0] [TOP]::my_constants.sigma_nb(nvals = 1) :: [1.e7] [TOP]::plt(nvals = 1) :: [roger_pec_plt] Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 4 4 B 7 B 12 B 8192 KiB 8192 KiB 8192 KiB main() 280 3304 B 3306 B 3310 B 3584 B 3584 B 3584 B WarpX::OneStep_nosub() 24 2214 B 2215 B 2218 B 2560 B 2560 B 2560 B WarpX::InitData() 12 734 B 737 B 740 B 768 B 768 B 768 B Unprofiled 88 0 B 0 B 0 B 256 B 256 B 256 B -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------- WarpX::InitData() 286 151 MiB 167 MiB 182 MiB 155 MiB 171 MiB 187 MiB PML::Exchange 1296 3239 KiB 3310 KiB 3357 KiB 10 MiB 10 MiB 11 MiB FillBoundary_nowait() 1074 3438 B 4356 B 5568 B 391 KiB 394 KiB 395 KiB FabArray::ParallelCopy_nowait() 1152 2996 B 3313 B 3557 B 86 KiB 104 KiB 122 KiB --------------------------------------------------------------------------------------------------------------- AMReX (26.09-188-g2ceecb347bea) finalized