Initializing AMReX (26.10-92-gec6902bd5e2b)... MPI initialized with 4 MPI processes MPI initialized with thread support level 3 AMReX (26.10-92-gec6902bd5e2b) initialized WarpX (820e10de7a29) _____ __ .__ / _ \________/ |_ ____ _____ |__| ______ / /_\ \_ __ \ __\/ __ \ / \| |/ ___/ / | \ | \/| | \ ___/| Y Y \ |\___ \ \____|__ /__| |__| \___ >__|_| /__/____ > \/ \/ \/ \/ Level 0: dt = 7.703332806e-16 ; dx = 5e-07 ; dy = 5e-07 ; dz = 5e-07 --- INFO : we are in init data of macro Grids Summary: Level 0 4 grids 2097152 cells 100 % of domain smallest grid: 128 x 64 x 64 biggest grid: 128 x 64 x 64 ------------------------------------------------------------------------------- --------------------------- MAIN EM PIC PARAMETERS ---------------------------- ------------------------------------------------------------------------------- Precision: | DOUBLE Particle precision: | DOUBLE Geometry: | 3D (XYZ) Operation mode: | Electromagnetic | - macroscopic | - Lax-Wendroff algorithm ------------------------------------------------------------------------------- Current Deposition: | Esirkepov Particle Pusher: | Boris Charge Deposition: | standard Field Gathering: | energy-conserving Particle Shape Factor:| 0 ------------------------------------------------------------------------------- Maxwell Solver: | Yee ------------------------------------------------------------------------------- For full input parameters, see the file: warpx_used_inputs --- INFO : Writing plotfile diags/plt000000 STEP 1 starts ... Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [roger_pec_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.TP(nvals = 1) :: [5.4545e-10] [TOP]::my_constants.dx(nvals = 3) :: [Lx, /, nx] [TOP]::my_constants.dy(nvals = 3) :: [Ly, /, ny] [TOP]::my_constants.dz(nvals = 3) :: [Lz, /, nz] [TOP]::my_constants.eps_r_nb(nvals = 1) :: [13.] [TOP]::my_constants.flag_none(nvals = 1) :: [0] [TOP]::my_constants.flag_ss(nvals = 1) :: [2] [TOP]::my_constants.mu_r_nb(nvals = 1) :: [1.0] [TOP]::my_constants.sigma_nb(nvals = 1) :: [1.e7] [TOP]::plt(nvals = 1) :: [roger_pec_plt] **** WARNINGS ****************************************************************** * GLOBAL warning list after [ FIRST STEP ] * * --> [! ] [Species] [raised 4 times] * particles.nspecies is ignored. Just use particles.species_names please. * @ Raised by: ALL * ******************************************************************************** STEP 1 ends. TIME = 7.703332806e-16 DT = 7.703332806e-16 Evolve time = 0.554341925 s; This step = 0.554341925 s; Avg. per step = 0.554341925 s STEP 2 starts ... STEP 2 ends. TIME = 1.540666561e-15 DT = 7.703332806e-16 Evolve time = 1.011101367 s; This step = 0.456759442 s; Avg. per step = 0.5055506835 s STEP 3 starts ... STEP 3 ends. TIME = 2.310999842e-15 DT = 7.703332806e-16 Evolve time = 1.533850638 s; This step = 0.522749271 s; Avg. per step = 0.511283546 s --- INFO : Writing plotfile diags/plt000003 Total Time : 1.921337052 TinyProfiler total time across processes [min...avg...max]: 1.924 ... 1.928 ... 1.932 -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- WarpX::OneStep_nosub() 3 0.4052 0.4139 0.4242 21.96% WarpX::MacroscopicEvolveE() 3 0.2988 0.3272 0.3517 18.21% FabArray::setVal() 177 0.3215 0.3331 0.346 17.91% amrex::Copy() 144 0.2464 0.254 0.2624 13.59% FabArray::ParallelCopy_finish() 144 0.009863 0.06846 0.1248 6.46% FabArray::LinComb() 72 0.07931 0.09995 0.1213 6.28% WarpX::EvolveB() 6 0.09147 0.09578 0.09933 5.14% FabArray::ParallelCopy_nowait() 144 0.08818 0.09091 0.09215 4.77% sample::Coarsen() 12 0.08333 0.08422 0.08569 4.44% VisMF::Write(FabArray) 2 0.03465 0.03528 0.03613 1.87% WarpX::InitData() 1 0.02501 0.0279 0.03095 1.60% FillBoundary_finish() 144 0.005876 0.01906 0.03044 1.58% PML::Exchange 72 0.02191 0.02362 0.02639 1.37% FillBoundary_nowait() 144 0.01518 0.01986 0.02445 1.27% WarpX::DampPML() 3 0.009867 0.01168 0.01307 0.68% DistributionMapping::LeastUsedCPUs() 1 1.341e-05 0.004239 0.008613 0.45% main() 1 0.002028 0.002364 0.002908 0.15% WriteMultiLevelPlotfile() 2 0.0005249 0.001569 0.002389 0.12% FlushFormatPlotfile::WriteToFile() 2 3.502e-05 0.0002235 0.0007738 0.04% FabArray::ParallelCopy() 144 0.0003674 0.000432 0.0005412 0.03% WarpX::Evolve::step 3 0.0001933 0.0003157 0.0005203 0.03% ablastr::utils::communication::ParallelCopy 144 0.0003979 0.0004319 0.0004754 0.02% ablastr::utils::communication::FillBoundary 144 0.0002178 0.0002387 0.0002565 0.01% MultiFab::Copy() 72 0.0002216 0.0002293 0.0002384 0.01% FabArray::FillBoundary() 126 0.0001372 0.0001424 0.0001509 0.01% Diagnostics::FilterComputePackFlush() 5 9.97e-05 0.000113 0.0001266 0.01% ablastr::utils::communication::OverrideSync 18 1.548e-05 2.314e-05 2.771e-05 0.00% FAbArray::OverrideSync() 18 1.601e-05 1.863e-05 2.133e-05 0.00% OverrideSync_finish() 18 1.037e-05 1.235e-05 1.401e-05 0.00% AmrMesh::MakeDistributionMap() 1 2.09e-06 6.499e-06 1.385e-05 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.298e-06 6.64e-06 8.876e-06 0.00% WarpX::Evolve() 1 2.738e-06 3.131e-06 3.677e-06 0.00% REG::WarpX::Evolve() 1 1.824e-06 2.845e-06 3.563e-06 0.00% Other 437 0.001352 0.002197 0.003245 0.17% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- main() 1 1.914 1.917 1.921 99.46% REG::WarpX::Evolve() 1 1.656 1.657 1.657 85.80% WarpX::Evolve() 1 1.656 1.657 1.657 85.80% WarpX::Evolve::step 3 1.534 1.535 1.536 79.49% WarpX::OneStep_nosub() 3 1.268 1.268 1.268 65.65% PML::Exchange 72 0.7559 0.7982 0.8397 43.47% WarpX::MacroscopicEvolveE() 3 0.2988 0.3272 0.3517 18.21% FabArray::setVal() 177 0.3215 0.3331 0.346 17.91% Diagnostics::FilterComputePackFlush() 5 0.2623 0.2737 0.2852 14.76% amrex::Copy() 144 0.2464 0.254 0.2624 13.59% WarpX::InitData() 1 0.2538 0.2583 0.262 13.56% ablastr::utils::communication::ParallelCopy 144 0.1029 0.1611 0.2147 11.12% FabArray::ParallelCopy() 144 0.1025 0.1607 0.2143 11.09% MultiFab::Copy() 72 0.1187 0.1257 0.132 6.84% FabArray::ParallelCopy_finish() 144 0.009863 0.06846 0.1248 6.46% FabArray::LinComb() 72 0.07931 0.09995 0.1213 6.28% WarpX::EvolveB() 6 0.09147 0.09578 0.09933 5.14% FabArray::ParallelCopy_nowait() 144 0.089 0.09176 0.09293 4.81% sample::Coarsen() 12 0.08333 0.08422 0.08569 4.44% FlushFormatPlotfile::WriteToFile() 2 0.03572 0.03713 0.03875 2.01% WriteMultiLevelPlotfile() 2 0.03569 0.0369 0.03798 1.97% VisMF::Write(FabArray) 2 0.03465 0.03528 0.03613 1.87% FillBoundary_finish() 144 0.005876 0.01906 0.03044 1.58% ablastr::utils::communication::FillBoundary 144 0.02904 0.02966 0.03018 1.56% FabArray::FillBoundary() 126 0.02598 0.02695 0.02787 1.44% FillBoundary_nowait() 144 0.01562 0.0203 0.0249 1.29% ablastr::utils::communication::OverrideSync 18 0.000965 0.0102 0.01754 0.91% FAbArray::OverrideSync() 18 0.0009496 0.01017 0.01751 0.91% OverrideSync_finish() 18 0.000222 0.009488 0.01692 0.88% WarpX::DampPML() 3 0.009867 0.01168 0.01307 0.68% AmrMesh::MakeDistributionMap() 1 3.694e-05 0.004253 0.008622 0.45% DistributionMapping::SFCProcessorMapDoIt() 1 2.309e-05 0.004247 0.00862 0.45% DistributionMapping::LeastUsedCPUs() 1 1.341e-05 0.004239 0.008613 0.45% Other 437 0.006479 0.01024 0.01428 0.74% -------------------------------------------------------------------------------------------- BEGIN REGION WarpX::Evolve() -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- WarpX::OneStep_nosub() 3 0.4052 0.4139 0.4242 21.96% WarpX::MacroscopicEvolveE() 3 0.2988 0.3272 0.3517 18.21% amrex::Copy() 132 0.2276 0.235 0.2425 12.55% FabArray::setVal() 132 0.2287 0.2313 0.2336 12.09% FabArray::LinComb() 66 0.07296 0.09235 0.112 5.80% WarpX::EvolveB() 6 0.09147 0.09578 0.09933 5.14% FabArray::ParallelCopy_finish() 132 0.007028 0.05105 0.09211 4.77% FabArray::ParallelCopy_nowait() 132 0.08108 0.08339 0.08445 4.37% sample::Coarsen() 6 0.03598 0.03627 0.03696 1.91% FillBoundary_finish() 132 0.005372 0.01816 0.02911 1.51% PML::Exchange 66 0.01933 0.02076 0.02307 1.19% FillBoundary_nowait() 132 0.01393 0.01821 0.02243 1.16% VisMF::Write(FabArray) 1 0.018 0.01812 0.01836 0.95% WarpX::DampPML() 3 0.009867 0.01168 0.01307 0.68% WriteMultiLevelPlotfile() 1 0.0002131 0.000718 0.000954 0.05% WarpX::Evolve::step 3 0.0001933 0.0003157 0.0005203 0.03% FabArray::ParallelCopy() 132 0.0003408 0.0004007 0.0005051 0.03% ablastr::utils::communication::ParallelCopy 132 0.0003735 0.0004062 0.0004471 0.02% FlushFormatPlotfile::WriteToFile() 1 1.335e-05 7.728e-05 0.0002674 0.01% ablastr::utils::communication::FillBoundary 132 0.0002017 0.0002208 0.0002357 0.01% MultiFab::Copy() 66 0.0002085 0.0002165 0.0002243 0.01% FabArray::FillBoundary() 114 0.0001266 0.0001314 0.0001394 0.01% Diagnostics::FilterComputePackFlush() 4 5.788e-05 6.109e-05 6.675e-05 0.00% ablastr::utils::communication::OverrideSync 18 1.548e-05 2.314e-05 2.771e-05 0.00% FAbArray::OverrideSync() 18 1.601e-05 1.863e-05 2.133e-05 0.00% OverrideSync_finish() 18 1.037e-05 1.235e-05 1.401e-05 0.00% WarpX::Evolve() 1 2.738e-06 3.131e-06 3.677e-06 0.00% REG::WarpX::Evolve() 1 1.824e-06 2.845e-06 3.563e-06 0.00% Other 368 0.0009095 0.001033 0.00128 0.07% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- REG::WarpX::Evolve() 1 1.656 1.657 1.657 85.80% WarpX::Evolve() 1 1.656 1.657 1.657 85.80% WarpX::Evolve::step 3 1.534 1.535 1.536 79.49% WarpX::OneStep_nosub() 3 1.268 1.268 1.268 65.65% PML::Exchange 66 0.6847 0.7155 0.746 38.62% WarpX::MacroscopicEvolveE() 3 0.2988 0.3272 0.3517 18.21% amrex::Copy() 132 0.2276 0.235 0.2425 12.55% FabArray::setVal() 132 0.2287 0.2313 0.2336 12.09% ablastr::utils::communication::ParallelCopy 132 0.09198 0.1359 0.1747 9.04% FabArray::ParallelCopy() 132 0.0916 0.1355 0.1742 9.02% MultiFab::Copy() 66 0.1105 0.1174 0.1231 6.37% Diagnostics::FilterComputePackFlush() 4 0.1219 0.1221 0.1224 6.34% FabArray::LinComb() 66 0.07296 0.09235 0.112 5.80% WarpX::EvolveB() 6 0.09147 0.09578 0.09933 5.14% FabArray::ParallelCopy_finish() 132 0.007028 0.05105 0.09211 4.77% FabArray::ParallelCopy_nowait() 132 0.0817 0.08402 0.08512 4.41% sample::Coarsen() 6 0.03598 0.03627 0.03696 1.91% FillBoundary_finish() 132 0.005372 0.01816 0.02911 1.51% ablastr::utils::communication::FillBoundary 132 0.0263 0.02693 0.02745 1.42% FabArray::FillBoundary() 114 0.02326 0.02424 0.02516 1.30% FillBoundary_nowait() 132 0.01424 0.01851 0.02272 1.18% FlushFormatPlotfile::WriteToFile() 1 0.01823 0.01895 0.01959 1.01% WriteMultiLevelPlotfile() 1 0.01821 0.01887 0.01933 1.00% VisMF::Write(FabArray) 1 0.018 0.01812 0.01836 0.95% ablastr::utils::communication::OverrideSync 18 0.000965 0.0102 0.01754 0.91% FAbArray::OverrideSync() 18 0.0009496 0.01017 0.01751 0.91% OverrideSync_finish() 18 0.000222 0.009488 0.01692 0.88% WarpX::DampPML() 3 0.009867 0.01168 0.01307 0.68% Other 368 0.005583 0.006695 0.008057 0.42% -------------------------------------------------------------------------------------------- END REGION WarpX::Evolve() Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [roger_pec_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.TP(nvals = 1) :: [5.4545e-10] [TOP]::my_constants.dx(nvals = 3) :: [Lx, /, nx] [TOP]::my_constants.dy(nvals = 3) :: [Ly, /, ny] [TOP]::my_constants.dz(nvals = 3) :: [Lz, /, nz] [TOP]::my_constants.eps_r_nb(nvals = 1) :: [13.] [TOP]::my_constants.flag_none(nvals = 1) :: [0] [TOP]::my_constants.flag_ss(nvals = 1) :: [2] [TOP]::my_constants.mu_r_nb(nvals = 1) :: [1.0] [TOP]::my_constants.sigma_nb(nvals = 1) :: [1.e7] [TOP]::plt(nvals = 1) :: [roger_pec_plt] Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 4 6 B 9 B 13 B 8192 KiB 8192 KiB 8192 KiB main() 280 3289 B 3297 B 3304 B 3584 B 3584 B 3584 B WarpX::OneStep_nosub() 24 2106 B 2107 B 2110 B 2560 B 2560 B 2560 B WarpX::InitData() 156 721 B 725 B 729 B 768 B 768 B 768 B Unprofiled 88 0 B 0 B 0 B 256 B 256 B 256 B -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------- WarpX::InitData() 286 150 MiB 165 MiB 180 MiB 155 MiB 171 MiB 187 MiB PML::Exchange 1296 4203 KiB 4303 KiB 4395 KiB 10 MiB 10 MiB 11 MiB FillBoundary_nowait() 1074 4320 B 5114 B 5925 B 391 KiB 394 KiB 395 KiB FabArray::ParallelCopy_nowait() 1152 3902 B 4238 B 4561 B 86 KiB 104 KiB 122 KiB --------------------------------------------------------------------------------------------------------------- AMReX (26.10-92-gec6902bd5e2b) finalized