Initializing AMReX (26.10-100-g1a2225294fb2)... MPI initialized with 4 MPI processes MPI initialized with thread support level 3 AMReX (26.10-100-g1a2225294fb2) initialized WarpX (820e10de7a29) _____ __ .__ / _ \________/ |_ ____ _____ |__| ______ / /_\ \_ __ \ __\/ __ \ / \| |/ ___/ / | \ | \/| | \ ___/| Y Y \ |\___ \ \____|__ /__| |__| \___ >__|_| /__/____ > \/ \/ \/ \/ Level 0: dt = 7.703332806e-16 ; dx = 5e-07 ; dy = 5e-07 ; dz = 5e-07 --- INFO : we are in init data of macro Grids Summary: Level 0 4 grids 2097152 cells 100 % of domain smallest grid: 128 x 64 x 64 biggest grid: 128 x 64 x 64 ------------------------------------------------------------------------------- --------------------------- MAIN EM PIC PARAMETERS ---------------------------- ------------------------------------------------------------------------------- Precision: | DOUBLE Particle precision: | DOUBLE Geometry: | 3D (XYZ) Operation mode: | Electromagnetic | - macroscopic | - Lax-Wendroff algorithm ------------------------------------------------------------------------------- Current Deposition: | Esirkepov Particle Pusher: | Boris Charge Deposition: | standard Field Gathering: | energy-conserving Particle Shape Factor:| 0 ------------------------------------------------------------------------------- Maxwell Solver: | Yee ------------------------------------------------------------------------------- For full input parameters, see the file: warpx_used_inputs --- INFO : Writing plotfile diags/plt000000 STEP 1 starts ... Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [roger_pec_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.TP(nvals = 1) :: [5.4545e-10] [TOP]::my_constants.dx(nvals = 3) :: [Lx, /, nx] [TOP]::my_constants.dy(nvals = 3) :: [Ly, /, ny] [TOP]::my_constants.dz(nvals = 3) :: [Lz, /, nz] [TOP]::my_constants.eps_r_nb(nvals = 1) :: [13.] [TOP]::my_constants.flag_none(nvals = 1) :: [0] [TOP]::my_constants.flag_ss(nvals = 1) :: [2] [TOP]::my_constants.mu_r_nb(nvals = 1) :: [1.0] [TOP]::my_constants.sigma_nb(nvals = 1) :: [1.e7] [TOP]::plt(nvals = 1) :: [roger_pec_plt] **** WARNINGS ****************************************************************** * GLOBAL warning list after [ FIRST STEP ] * * --> [! ] [Species] [raised 4 times] * particles.nspecies is ignored. Just use particles.species_names please. * @ Raised by: ALL * ******************************************************************************** STEP 1 ends. TIME = 7.703332806e-16 DT = 7.703332806e-16 Evolve time = 0.572609686 s; This step = 0.572609686 s; Avg. per step = 0.572609686 s STEP 2 starts ... STEP 2 ends. TIME = 1.540666561e-15 DT = 7.703332806e-16 Evolve time = 1.026319987 s; This step = 0.453710301 s; Avg. per step = 0.5131599935 s STEP 3 starts ... STEP 3 ends. TIME = 2.310999842e-15 DT = 7.703332806e-16 Evolve time = 1.54707935 s; This step = 0.520759363 s; Avg. per step = 0.5156931167 s --- INFO : Writing plotfile diags/plt000003 Total Time : 1.952790052 TinyProfiler total time across processes [min...avg...max]: 1.957 ... 1.96 ... 1.964 -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- WarpX::OneStep_nosub() 3 0.3984 0.4106 0.4311 21.95% WarpX::MacroscopicEvolveE() 3 0.2979 0.3248 0.3537 18.01% FabArray::setVal() 177 0.3213 0.3311 0.3415 17.39% amrex::Copy() 144 0.244 0.2524 0.2639 13.44% FabArray::ParallelCopy_finish() 144 0.04807 0.09111 0.1566 7.98% FabArray::LinComb() 72 0.07684 0.09687 0.118 6.01% sample::Coarsen() 12 0.08713 0.09152 0.1031 5.25% WarpX::EvolveB() 6 0.08983 0.09666 0.1023 5.21% FabArray::ParallelCopy_nowait() 144 0.08715 0.08987 0.09122 4.65% WarpX::InitData() 1 0.02553 0.03464 0.05328 2.71% VisMF::Write(FabArray) 2 0.03378 0.03444 0.03522 1.79% FillBoundary_finish() 144 0.006153 0.01871 0.03368 1.72% PML::Exchange 72 0.02272 0.02416 0.02609 1.33% FillBoundary_nowait() 144 0.01488 0.01963 0.02441 1.24% WriteMultiLevelPlotfile() 2 0.0009036 0.01283 0.01715 0.87% WarpX::DampPML() 3 0.007226 0.01204 0.01633 0.83% DistributionMapping::LeastUsedCPUs() 1 1.637e-05 0.002745 0.005502 0.28% main() 1 0.001064 0.001694 0.002229 0.11% FlushFormatPlotfile::WriteToFile() 2 3.407e-05 0.0002226 0.0007729 0.04% ablastr::utils::communication::ParallelCopy 144 0.0003417 0.0004691 0.0006441 0.03% WarpX::Evolve::step 3 0.0001769 0.0003095 0.0004995 0.03% FabArray::ParallelCopy() 144 0.0003574 0.0004242 0.0004824 0.02% ablastr::utils::communication::FillBoundary 144 0.0002288 0.000246 0.0002803 0.01% MultiFab::Copy() 72 0.0002191 0.0002313 0.0002449 0.01% FabArray::FillBoundary() 126 0.0001357 0.0001438 0.0001477 0.01% Diagnostics::FilterComputePackFlush() 5 8.768e-05 0.0001026 0.0001091 0.01% ablastr::utils::communication::OverrideSync 18 1.674e-05 2.493e-05 3.431e-05 0.00% FAbArray::OverrideSync() 18 1.459e-05 1.869e-05 2.21e-05 0.00% OverrideSync_finish() 18 1.034e-05 1.29e-05 1.519e-05 0.00% AmrMesh::MakeDistributionMap() 1 1.722e-06 3.579e-06 9.001e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.27e-06 4.455e-06 7.509e-06 0.00% WarpX::Evolve() 1 2.875e-06 3.282e-06 4.395e-06 0.00% REG::WarpX::Evolve() 1 2.279e-06 2.884e-06 4.072e-06 0.00% Other 437 0.001309 0.002239 0.004509 0.23% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- main() 1 1.948 1.95 1.953 99.45% REG::WarpX::Evolve() 1 1.671 1.671 1.672 85.13% WarpX::Evolve() 1 1.671 1.671 1.672 85.13% WarpX::Evolve::step 3 1.547 1.548 1.548 78.84% WarpX::OneStep_nosub() 3 1.281 1.282 1.282 65.28% PML::Exchange 72 0.7884 0.8165 0.8706 44.34% WarpX::MacroscopicEvolveE() 3 0.2979 0.3248 0.3537 18.01% FabArray::setVal() 177 0.3213 0.3311 0.3415 17.39% Diagnostics::FilterComputePackFlush() 5 0.2812 0.2915 0.3084 15.71% WarpX::InitData() 1 0.2742 0.2773 0.2807 14.29% amrex::Copy() 144 0.244 0.2524 0.2639 13.44% ablastr::utils::communication::ParallelCopy 144 0.1396 0.1827 0.2457 12.51% FabArray::ParallelCopy() 144 0.1392 0.1823 0.2451 12.48% FabArray::ParallelCopy_finish() 144 0.04807 0.09111 0.1566 7.98% MultiFab::Copy() 72 0.117 0.1249 0.1336 6.80% FabArray::LinComb() 72 0.07684 0.09687 0.118 6.01% sample::Coarsen() 12 0.08713 0.09152 0.1031 5.25% WarpX::EvolveB() 6 0.08983 0.09666 0.1023 5.21% FabArray::ParallelCopy_nowait() 144 0.088 0.09072 0.0922 4.70% FlushFormatPlotfile::WriteToFile() 2 0.03713 0.04756 0.05154 2.62% WriteMultiLevelPlotfile() 2 0.03636 0.04734 0.05149 2.62% VisMF::Write(FabArray) 2 0.03378 0.03444 0.03522 1.79% FillBoundary_finish() 144 0.006153 0.01871 0.03368 1.72% ablastr::utils::communication::FillBoundary 144 0.02902 0.02952 0.03008 1.53% FabArray::FillBoundary() 126 0.02583 0.02679 0.02774 1.41% FillBoundary_nowait() 144 0.01532 0.02008 0.02487 1.27% ablastr::utils::communication::OverrideSync 18 0.0009621 0.009767 0.0205 1.04% FAbArray::OverrideSync() 18 0.0009454 0.009742 0.02046 1.04% OverrideSync_finish() 18 0.0002329 0.009073 0.01987 1.01% WarpX::DampPML() 3 0.007226 0.01204 0.01633 0.83% AmrMesh::MakeDistributionMap() 1 2.253e-05 0.002754 0.005519 0.28% DistributionMapping::SFCProcessorMapDoIt() 1 2.081e-05 0.002751 0.00551 0.28% DistributionMapping::LeastUsedCPUs() 1 1.637e-05 0.002745 0.005502 0.28% Other 437 0.006452 0.01044 0.0193 0.98% -------------------------------------------------------------------------------------------- BEGIN REGION WarpX::Evolve() -------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % -------------------------------------------------------------------------------------------- WarpX::OneStep_nosub() 3 0.3984 0.4106 0.4311 21.95% WarpX::MacroscopicEvolveE() 3 0.2979 0.3248 0.3537 18.01% amrex::Copy() 132 0.2255 0.2334 0.2436 12.41% FabArray::setVal() 132 0.2293 0.2324 0.2336 11.90% FabArray::ParallelCopy_finish() 132 0.0336 0.07232 0.1175 5.98% FabArray::LinComb() 66 0.07103 0.08995 0.1099 5.59% WarpX::EvolveB() 6 0.08983 0.09666 0.1023 5.21% FabArray::ParallelCopy_nowait() 132 0.08001 0.08238 0.08372 4.26% sample::Coarsen() 6 0.0384 0.03868 0.03939 2.01% FillBoundary_finish() 132 0.005602 0.01776 0.03235 1.65% PML::Exchange 66 0.02012 0.02127 0.02292 1.17% FillBoundary_nowait() 132 0.01361 0.01801 0.02247 1.14% VisMF::Write(FabArray) 1 0.01715 0.01739 0.01769 0.90% WarpX::DampPML() 3 0.007226 0.01204 0.01633 0.83% WriteMultiLevelPlotfile() 1 0.0002073 0.0007371 0.0009959 0.05% ablastr::utils::communication::ParallelCopy 132 0.000319 0.0004432 0.0006147 0.03% WarpX::Evolve::step 3 0.0001769 0.0003095 0.0004995 0.03% FabArray::ParallelCopy() 132 0.0003253 0.0003876 0.0004453 0.02% ablastr::utils::communication::FillBoundary 132 0.0002121 0.0002262 0.0002577 0.01% FlushFormatPlotfile::WriteToFile() 1 1.316e-05 7.456e-05 0.0002543 0.01% MultiFab::Copy() 66 0.0002066 0.0002186 0.0002327 0.01% FabArray::FillBoundary() 114 0.0001246 0.000133 0.0001377 0.01% Diagnostics::FilterComputePackFlush() 4 5.034e-05 5.493e-05 6.052e-05 0.00% ablastr::utils::communication::OverrideSync 18 1.674e-05 2.493e-05 3.431e-05 0.00% FAbArray::OverrideSync() 18 1.459e-05 1.869e-05 2.21e-05 0.00% OverrideSync_finish() 18 1.034e-05 1.29e-05 1.519e-05 0.00% WarpX::Evolve() 1 2.875e-06 3.282e-06 4.395e-06 0.00% REG::WarpX::Evolve() 1 2.279e-06 2.884e-06 4.072e-06 0.00% Other 368 0.0008743 0.001031 0.001281 0.07% -------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % -------------------------------------------------------------------------------------------- REG::WarpX::Evolve() 1 1.671 1.671 1.672 85.13% WarpX::Evolve() 1 1.671 1.671 1.672 85.13% WarpX::Evolve::step 3 1.547 1.548 1.548 78.84% WarpX::OneStep_nosub() 3 1.281 1.282 1.282 65.28% PML::Exchange 66 0.7075 0.7334 0.7702 39.23% WarpX::MacroscopicEvolveE() 3 0.2979 0.3248 0.3537 18.01% amrex::Copy() 132 0.2255 0.2334 0.2436 12.41% FabArray::setVal() 132 0.2293 0.2324 0.2336 11.90% ablastr::utils::communication::ParallelCopy 132 0.1171 0.1562 0.1991 10.14% FabArray::ParallelCopy() 132 0.1167 0.1557 0.1985 10.11% MultiFab::Copy() 66 0.1091 0.1167 0.1243 6.33% Diagnostics::FilterComputePackFlush() 4 0.1231 0.1234 0.1238 6.31% FabArray::ParallelCopy_finish() 132 0.0336 0.07232 0.1175 5.98% FabArray::LinComb() 66 0.07103 0.08995 0.1099 5.59% WarpX::EvolveB() 6 0.08983 0.09666 0.1023 5.21% FabArray::ParallelCopy_nowait() 132 0.08063 0.083 0.08446 4.30% sample::Coarsen() 6 0.0384 0.03868 0.03939 2.01% FillBoundary_finish() 132 0.005602 0.01776 0.03235 1.65% ablastr::utils::communication::FillBoundary 132 0.02627 0.02678 0.02735 1.39% FabArray::FillBoundary() 114 0.0231 0.02407 0.02502 1.27% FillBoundary_nowait() 132 0.01392 0.01831 0.02276 1.16% ablastr::utils::communication::OverrideSync 18 0.0009621 0.009767 0.0205 1.04% FAbArray::OverrideSync() 18 0.0009454 0.009742 0.02046 1.04% OverrideSync_finish() 18 0.0002329 0.009073 0.01987 1.01% FlushFormatPlotfile::WriteToFile() 1 0.01741 0.01823 0.01893 0.96% WriteMultiLevelPlotfile() 1 0.0174 0.01816 0.01867 0.95% VisMF::Write(FabArray) 1 0.01715 0.01739 0.01769 0.90% WarpX::DampPML() 3 0.007226 0.01204 0.01633 0.83% Other 368 0.005539 0.006705 0.007937 0.40% -------------------------------------------------------------------------------------------- END REGION WarpX::Evolve() Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [roger_pec_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::my_constants.TP(nvals = 1) :: [5.4545e-10] [TOP]::my_constants.dx(nvals = 3) :: [Lx, /, nx] [TOP]::my_constants.dy(nvals = 3) :: [Ly, /, ny] [TOP]::my_constants.dz(nvals = 3) :: [Lz, /, nz] [TOP]::my_constants.eps_r_nb(nvals = 1) :: [13.] [TOP]::my_constants.flag_none(nvals = 1) :: [0] [TOP]::my_constants.flag_ss(nvals = 1) :: [2] [TOP]::my_constants.mu_r_nb(nvals = 1) :: [1.0] [TOP]::my_constants.sigma_nb(nvals = 1) :: [1.e7] [TOP]::plt(nvals = 1) :: [roger_pec_plt] Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 4 6 B 8 B 12 B 8192 KiB 8192 KiB 8192 KiB main() 280 3298 B 3301 B 3307 B 3584 B 3584 B 3584 B WarpX::OneStep_nosub() 24 2090 B 2093 B 2095 B 2560 B 2560 B 2560 B WarpX::InitData() 156 725 B 727 B 733 B 768 B 768 B 768 B Unprofiled 88 0 B 0 B 0 B 256 B 256 B 256 B -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------- WarpX::InitData() 286 150 MiB 165 MiB 180 MiB 155 MiB 171 MiB 187 MiB PML::Exchange 1296 4166 KiB 4339 KiB 4491 KiB 10 MiB 10 MiB 11 MiB FillBoundary_nowait() 1074 4330 B 4992 B 5486 B 391 KiB 394 KiB 395 KiB FabArray::ParallelCopy_nowait() 1152 3892 B 4303 B 4716 B 86 KiB 104 KiB 122 KiB --------------------------------------------------------------------------------------------------------------- AMReX (26.10-100-g1a2225294fb2) finalized