Initializing AMReX (26.07-46-gbb6fcb8b3c7a)... MPI initialized with 4 MPI processes MPI initialized with thread support level 0 AMReX (26.07-46-gbb6fcb8b3c7a) initialized Calling Setup() Calling ReadParameters() reading extern runtime parameters ... Calling VariableSetup() Calling BCSetup() Calling BaseStateGeometry::Init() Calling Init() Calling InitData() initdata model_File = model.hse.cool.coulomb model file = model.hse.cool.coulomb reading initial model 640 points found in the initial model 6 variables found in the initial model model file mapping, level: 0 dr of MAESTRO base state = 562500.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 365 radius at r_cutoff 205593750 Maximum HSE Error = 0.000061 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile reacting_bubble_2d_pltInitData after InitData inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.56357157 inner sponge: r_sp , r_tp : 186468750, 224718750 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.002601913 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble_2d_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.555844052 Call to firstdt for level 0 gives dt_lev = 0.0004741796958 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741796958 Minimum firstdt over all levels = 0.0004741796958 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 9721.075292 MLMG: Initial residual (resid0) = 9721.075292 MLMG: Final Iter. 5 resid, resid/bnorm = 2.7856207e-05, 2.865547911e-09 MLMG: Timers: Solve = 0.067547592 Iter = 0.065015038 Bottom = 0.000147832 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1640874127 Minimum estdt over all levels = 0.1640874127 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1640874127 Multiplying dt by init_shrink; dt = 0.1640874127 Ignoring this new dt since it's larger than the previous dt = 0.0004741796958 Writing plotfile reacting_bubble_2d_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.561507996 Doing initial pressure iteration #1  Timestep 0 starts with TIME = 0 DT = 0.0004741796958 Cell Count: Level 0, 245760 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 3039467.923 MLMG: Initial residual (resid0) = 3039467.923 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0002117165313, 6.965578734e-11 MLMG: Timers: Solve = 0.041990121 Iter = 0.039172747 Bottom = 0.000302962 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3039465.377 MLMG: Initial residual (resid0) = 12702.29496 MLMG: Final Iter. 4 resid, resid/bnorm = 0.00019068922, 6.273775034e-11 MLMG: Timers: Solve = 0.022529335 Iter = 0.019669718 Bottom = 0.000141079 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.286261402e+10 MLMG: Initial residual (resid0) = 1.286261402e+10 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0006450861692, 5.015202727e-14 MLMG: Timers: Solve = 0.106409619 Iter = 0.103854772 Bottom = 0.000244518 Done calling nodal solver Timestep 0 ends with TIME = 0.0004741796958 DT = 0.0004741796958 Timing summary: Advection :0.206994156 seconds MAC Proj :0.074274121 seconds Nodal Proj :0.134367487 seconds Reactions :0.909152604 seconds Misc :0.1385533 seconds Base State :0.000710562 seconds Time to advance time step: 1.46938352 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.559756777 Beginning main evolution  Timestep 1 starts with TIME = 0 DT = 0.0004741796958 Cell Count: Level 0, 245760 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 833900.7098 MLMG: Initial residual (resid0) = 833900.7098 MLMG: Final Iter. 7 resid, resid/bnorm = 8.080657636e-05, 9.69019158e-11 MLMG: Timers: Solve = 0.037352188 Iter = 0.03432317 Bottom = 0.000265065 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 833900.67 MLMG: Initial residual (resid0) = 1.478931309 MLMG: Final Iter. 4 resid, resid/bnorm = 4.26380809e-05, 5.113088697e-11 MLMG: Timers: Solve = 0.022420743 Iter = 0.019660154 Bottom = 0.000127675 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6099195.993 MLMG: Initial residual (resid0) = 6099195.993 MLMG: Final Iter. 8 resid, resid/bnorm = 2.555025276e-07, 4.189118171e-14 MLMG: Timers: Solve = 0.106548037 Iter = 0.10393945 Bottom = 0.00024867 Done calling nodal solver Timestep 1 ends with TIME = 0.0004741796958 DT = 0.0004741796958 Timing summary: Advection :0.203895454 seconds MAC Proj :0.069194038 seconds Nodal Proj :0.134674971 seconds Reactions :0.910615671 seconds Misc :0.136259203 seconds Base State :0.000694189 seconds Time to advance time step: 1.459372114 Call to estdt for level 0 gives dt_lev = 0.2283219495 Minimum estdt over all levels = 0.2283219495 Call to estdt at beginning of step 2 gives dt =0.2283219495 dt_growth factor limits the new dt = 0.0005215976653  Timestep 2 starts with TIME = 0.0004741796958 DT = 0.0005215976653 Cell Count: Level 0, 245760 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 910937.2256 MLMG: Initial residual (resid0) = 910937.2256 MLMG: Final Iter. 7 resid, resid/bnorm = 8.816804814e-05, 9.678828097e-11 MLMG: Timers: Solve = 0.037385506 Iter = 0.034421936 Bottom = 0.000254207 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 910943.1296 MLMG: Initial residual (resid0) = 4850.38368 MLMG: Final Iter. 6 resid, resid/bnorm = 2.823447459e-05, 3.099477198e-11 MLMG: Timers: Solve = 0.031986639 Iter = 0.029260461 Bottom = 0.000194447 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6722905.404 MLMG: Initial residual (resid0) = 6722905.404 MLMG: Final Iter. 8 resid, resid/bnorm = 3.056993592e-07, 4.547131646e-14 MLMG: Timers: Solve = 0.106221392 Iter = 0.103666557 Bottom = 0.000246337 Done calling nodal solver Timestep 2 ends with TIME = 0.0009957773611 DT = 0.0005215976653 Timing summary: Advection :0.204531765 seconds MAC Proj :0.079028168 seconds Nodal Proj :0.135653687 seconds Reactions :0.91093156 seconds Misc :0.137989524 seconds Base State :0.000695515 seconds Time to advance time step: 1.468341583 Call to estdt for level 0 gives dt_lev = 0.2283888372 Minimum estdt over all levels = 0.2283888372 Call to estdt at beginning of step 3 gives dt =0.2283888372 dt_growth factor limits the new dt = 0.0005737574319  Timestep 3 starts with TIME = 0.0009957773611 DT = 0.0005737574319 Cell Count: Level 0, 245760 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1016966.589 MLMG: Initial residual (resid0) = 1016966.589 MLMG: Final Iter. 7 resid, resid/bnorm = 9.763004692e-05, 9.600123342e-11 MLMG: Timers: Solve = 0.036972748 Iter = 0.034285339 Bottom = 0.000259387 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1016973.082 MLMG: Initial residual (resid0) = 4440.00491 MLMG: Final Iter. 6 resid, resid/bnorm = 2.49162079e-05, 2.450036126e-11 MLMG: Timers: Solve = 0.032351071 Iter = 0.029690184 Bottom = 0.00019458 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 7395260.911 MLMG: Initial residual (resid0) = 7395260.911 MLMG: Final Iter. 8 resid, resid/bnorm = 3.19123501e-07, 4.3152433e-14 MLMG: Timers: Solve = 0.106762245 Iter = 0.104014371 Bottom = 0.00024692 Done calling nodal solver Timestep 3 ends with TIME = 0.001569534793 DT = 0.0005737574319 Timing summary: Advection :0.202921732 seconds MAC Proj :0.078667868 seconds Nodal Proj :0.135272179 seconds Reactions :0.89936347 seconds Misc :0.13894959 seconds Base State :0.000689273 seconds Time to advance time step: 1.455377798 Writing plotfile 3 inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.561840852 Total Time: 10.16192636 Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble_2d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::amr.plot_file(nvals = 1) :: [reacting_bubble_2d_plt] [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] AMReX (26.07-46-gbb6fcb8b3c7a) finalized