Initializing AMReX (26.09-180-g763b7185b24b)... MPI initialized with 2 MPI processes MPI initialized with thread support level 0 OMP initialized with 4 OMP threads AMReX (26.09-180-g763b7185b24b) initialized Calling Setup() Calling ReadParameters() reading extern runtime parameters ... Calling VariableSetup() Calling BCSetup() Calling BaseStateGeometry::Init() Calling Init() Calling InitData() initdata model_File = model.hse.cool.coulomb model file = model.hse.cool.coulomb reading initial model 640 points found in the initial model 6 variables found in the initial model model file mapping, level: 0 dr of MAESTRO base state = 2250000.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 91 radius at r_cutoff 205875000 Maximum HSE Error = 0.006358 (after putting initial model into base state arrays, and for density < base_cutoff_density) model file mapping, level: 1 dr of MAESTRO base state = 1125000.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 182 radius at r_cutoff 205312500 Maximum HSE Error = 0.001719 (after putting initial model into base state arrays, and for density < base_cutoff_density) model file mapping, level: 2 dr of MAESTRO base state = 562500.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 365 radius at r_cutoff 205593750 Maximum HSE Error = 0.000061 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile reacting_bubble_omp_2d_pltInitData after InitData inner sponge: r_sp , r_tp : 187875000, 223875000 Time to write plotfile: 0.160189623 inner sponge: r_sp , r_tp : 187875000, 223875000 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.004011112 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble_omp_2d_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 187875000, 223875000 Time to write plotfile: 0.150088787 Call to firstdt for level 0 gives dt_lev = 0.001900186535 Multiplying dt_lev by init_shrink; dt_lev = 0.001900186535 Call to firstdt for level 1 gives dt_lev = 0.001060149082 Multiplying dt_lev by init_shrink; dt_lev = 0.001060149082 Call to firstdt for level 2 gives dt_lev = 0.0005417438695 Multiplying dt_lev by init_shrink; dt_lev = 0.0005417438695 Minimum firstdt over all levels = 0.0005417438695 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 12829.54334 MLMG: Initial residual (resid0) = 12829.54334 MLMG: Final Iter. 4 resid, resid/bnorm = 0.002447778483, 1.907923312e-07 MLMG: Timers: Solve = 0.045580584 Iter = 0.041917885 Bottom = 0.007375494 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.3355212738 Call to estdt for level 1 gives dt_lev = 0.2352464797 Call to estdt for level 2 gives dt_lev = 0.1661095905 Minimum estdt over all levels = 0.1661095905 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1661095905 Multiplying dt by init_shrink; dt = 0.1661095905 Ignoring this new dt since it's larger than the previous dt = 0.0005417438695 Writing plotfile reacting_bubble_omp_2d_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 187875000, 223875000 Time to write plotfile: 0.148829023 Doing initial pressure iteration #1  Timestep 0 starts with TIME = 0 DT = 0.0005417438695 Cell Count: Level 0, 10240 cells Level 1, 6144 cells Level 2, 18432 cells inner sponge: r_sp , r_tp : 187875000, 223875000 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 3239326.635 MLMG: Initial residual (resid0) = 3239326.635 MLMG: Final Iter. 7 resid, resid/bnorm = 0.01097360777, 3.387620024e-09 MLMG: Timers: Solve = 0.099716505 Iter = 0.094846862 Bottom = 0.014968359 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3239323.796 MLMG: Initial residual (resid0) = 725.3962993 MLMG: Final Iter. 3 resid, resid/bnorm = 0.003114101437, 9.613430558e-10 MLMG: Timers: Solve = 0.044703717 Iter = 0.040232266 Bottom = 0.005287919 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.199753161e+10 MLMG: Initial residual (resid0) = 1.199753161e+10 MLMG: Final Iter. 8 resid, resid/bnorm = 0.3726551011, 3.106098099e-11 MLMG: Timers: Solve = 0.085338611 Iter = 0.081594198 Bottom = 0.012526887 Done calling nodal solver Timestep 0 ends with TIME = 0.0005417438695 DT = 0.0005417438695 Timing summary: Advection :0.208638225 seconds MAC Proj :0.169811387 seconds Nodal Proj :0.103320733 seconds Reactions :0.207296115 seconds Misc :0.041777729 seconds Base State :0.002639674 seconds Time to advance time step: 0.736463894 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 187875000, 223875000 Time to write plotfile: 0.15075443 Beginning main evolution  Timestep 1 starts with TIME = 0 DT = 0.0005417438695 Cell Count: Level 0, 10240 cells Level 1, 6144 cells Level 2, 18432 cells inner sponge: r_sp , r_tp : 187875000, 223875000 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 942189.5181 MLMG: Initial residual (resid0) = 942189.5181 MLMG: Final Iter. 7 resid, resid/bnorm = 0.0007745535841, 8.220783283e-10 MLMG: Timers: Solve = 0.098956098 Iter = 0.094160327 Bottom = 0.014116108 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 942189.5508 MLMG: Initial residual (resid0) = 1.101786672 MLMG: Final Iter. 1 resid, resid/bnorm = 0.006008855853, 6.377544569e-09 MLMG: Timers: Solve = 0.019253465 Iter = 0.01488207 Bottom = 0.002357393 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6499597.233 MLMG: Initial residual (resid0) = 6499597.233 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0002018829837, 3.106084523e-11 MLMG: Timers: Solve = 0.086083924 Iter = 0.082300998 Bottom = 0.012603587 Done calling nodal solver Timestep 1 ends with TIME = 0.0005417438695 DT = 0.0005417438695 Timing summary: Advection :0.209013646 seconds MAC Proj :0.143257226 seconds Nodal Proj :0.10462851 seconds Reactions :0.205935034 seconds Misc :0.040882084 seconds Base State :0.002619922 seconds Time to advance time step: 0.70942329 Call to estdt for level 0 gives dt_lev = 0.4621907804 Call to estdt for level 1 gives dt_lev = 0.3237148623 Call to estdt for level 2 gives dt_lev = 0.2282385665 Minimum estdt over all levels = 0.2282385665 Call to estdt at beginning of step 2 gives dt =0.2282385665 dt_growth factor limits the new dt = 0.0005959182564  Timestep 2 starts with TIME = 0.0005417438695 DT = 0.0005959182564 Cell Count: Level 0, 10240 cells Level 1, 6144 cells Level 2, 18432 cells inner sponge: r_sp , r_tp : 187875000, 223875000 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1393713.481 MLMG: Initial residual (resid0) = 1393713.481 MLMG: Final Iter. 6 resid, resid/bnorm = 0.0130193217, 9.341462131e-09 MLMG: Timers: Solve = 0.086882768 Iter = 0.082024696 Bottom = 0.012875823 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1393713.988 MLMG: Initial residual (resid0) = 4319.007887 MLMG: Final Iter. 4 resid, resid/bnorm = 0.0009232836637, 6.62462795e-10 MLMG: Timers: Solve = 0.058267433 Iter = 0.053831534 Bottom = 0.007570621 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 7165134.554 MLMG: Initial residual (resid0) = 7165134.554 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0002226793367, 3.107817935e-11 MLMG: Timers: Solve = 0.08688805 Iter = 0.083103829 Bottom = 0.013105043 Done calling nodal solver Timestep 2 ends with TIME = 0.001137662126 DT = 0.0005959182564 Timing summary: Advection :0.209294758 seconds MAC Proj :0.170139612 seconds Nodal Proj :0.104772998 seconds Reactions :0.20880122 seconds Misc :0.041220812 seconds Base State :0.002615243 seconds Time to advance time step: 0.734666968 Call to estdt for level 0 gives dt_lev = 0.4623016556 Call to estdt for level 1 gives dt_lev = 0.3238059217 Call to estdt for level 2 gives dt_lev = 0.2283160204 Minimum estdt over all levels = 0.2283160204 Call to estdt at beginning of step 3 gives dt =0.2283160204 dt_growth factor limits the new dt = 0.000655510082  Timestep 3 starts with TIME = 0.001137662126 DT = 0.000655510082 Cell Count: Level 0, 10240 cells Level 1, 6144 cells Level 2, 18432 cells inner sponge: r_sp , r_tp : 187875000, 223875000 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 2106885.464 MLMG: Initial residual (resid0) = 2106885.464 MLMG: Final Iter. 6 resid, resid/bnorm = 0.01652393156, 7.842823843e-09 MLMG: Timers: Solve = 0.08701027 Iter = 0.08226935 Bottom = 0.01277893 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 2106886.022 MLMG: Initial residual (resid0) = 501.922574 MLMG: Final Iter. 3 resid, resid/bnorm = 0.007314645616, 3.471780409e-09 MLMG: Timers: Solve = 0.045253344 Iter = 0.040792793 Bottom = 0.005507207 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 7881714.908 MLMG: Initial residual (resid0) = 7881714.908 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0002477011585, 3.142731771e-11 MLMG: Timers: Solve = 0.087564716 Iter = 0.08371874 Bottom = 0.01306472 Done calling nodal solver Timestep 3 ends with TIME = 0.001793172208 DT = 0.000655510082 Timing summary: Advection :0.21049892 seconds MAC Proj :0.157439385 seconds Nodal Proj :0.105638171 seconds Reactions :0.209059274 seconds Misc :0.041908129 seconds Base State :0.002608395 seconds Time to advance time step: 0.724980661 Writing plotfile 3 inner sponge: r_sp , r_tp : 187875000, 223875000 Time to write plotfile: 0.151361531 Total Time: 4.777842391 Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble_omp_2d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::amr.plot_file(nvals = 1) :: [reacting_bubble_omp_2d_plt] AMReX (26.09-180-g763b7185b24b) finalized