Initializing AMReX (26.09-185-g19d64c697f1a)... MPI initialized with 4 MPI processes MPI initialized with thread support level 0 AMReX (26.09-185-g19d64c697f1a) initialized Calling Setup() Calling ReadParameters() reading extern runtime parameters ... Calling VariableSetup() Calling BCSetup() Calling BaseStateGeometry::Init() Calling Init() Calling InitData() initdata model_File = model.hse.cool.coulomb model file = model.hse.cool.coulomb reading initial model 640 points found in the initial model 6 variables found in the initial model model file mapping, level: 0 dr of MAESTRO base state = 2250000.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 91 radius at r_cutoff 205875000 Maximum HSE Error = 0.006358 (after putting initial model into base state arrays, and for density < base_cutoff_density) model file mapping, level: 1 dr of MAESTRO base state = 1125000.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 182 radius at r_cutoff 205312500 Maximum HSE Error = 0.001719 (after putting initial model into base state arrays, and for density < base_cutoff_density) model file mapping, level: 2 dr of MAESTRO base state = 562500.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 365 radius at r_cutoff 205593750 Maximum HSE Error = 0.000061 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile reacting_bubble_2d_amr_pltInitData after InitData inner sponge: r_sp , r_tp : 187875000, 223875000 Time to write plotfile: 0.092306437 inner sponge: r_sp , r_tp : 187875000, 223875000 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.000697361 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble_2d_amr_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 187875000, 223875000 Time to write plotfile: 0.090217004 Call to firstdt for level 0 gives dt_lev = 0.001900186535 Multiplying dt_lev by init_shrink; dt_lev = 0.001900186535 Call to firstdt for level 1 gives dt_lev = 0.001060149082 Multiplying dt_lev by init_shrink; dt_lev = 0.001060149082 Call to firstdt for level 2 gives dt_lev = 0.0005417438695 Multiplying dt_lev by init_shrink; dt_lev = 0.0005417438695 Minimum firstdt over all levels = 0.0005417438695 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 12829.54334 MLMG: Initial residual (resid0) = 12829.54334 MLMG: Final Iter. 4 resid, resid/bnorm = 0.002447835994, 1.907968139e-07 MLMG: Timers: Solve = 0.009314268 Iter = 0.008762097 Bottom = 0.000133039 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.3355212738 Call to estdt for level 1 gives dt_lev = 0.2352464797 Call to estdt for level 2 gives dt_lev = 0.1661095905 Minimum estdt over all levels = 0.1661095905 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1661095905 Multiplying dt by init_shrink; dt = 0.1661095905 Ignoring this new dt since it's larger than the previous dt = 0.0005417438695 Writing plotfile reacting_bubble_2d_amr_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 187875000, 223875000 Time to write plotfile: 0.090014158 Doing initial pressure iteration #1  Timestep 0 starts with TIME = 0 DT = 0.0005417438695 Cell Count: Level 0, 10240 cells Level 1, 6144 cells Level 2, 18432 cells inner sponge: r_sp , r_tp : 187875000, 223875000 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 3239326.635 MLMG: Initial residual (resid0) = 3239326.635 MLMG: Final Iter. 7 resid, resid/bnorm = 0.01097363036, 3.387626996e-09 MLMG: Timers: Solve = 0.008525079 Iter = 0.007828171 Bottom = 0.0002278 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3239323.796 MLMG: Initial residual (resid0) = 725.3963012 MLMG: Final Iter. 3 resid, resid/bnorm = 0.003112709168, 9.609132534e-10 MLMG: Timers: Solve = 0.004276352 Iter = 0.00360871 Bottom = 9.0785e-05 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.199753161e+10 MLMG: Initial residual (resid0) = 1.199753161e+10 MLMG: Final Iter. 8 resid, resid/bnorm = 0.3726389781, 3.105963712e-11 MLMG: Timers: Solve = 0.017505186 Iter = 0.016949692 Bottom = 0.00022794 Done calling nodal solver Timestep 0 ends with TIME = 0.0005417438695 DT = 0.0005417438695 Timing summary: Advection :0.04819071 seconds MAC Proj :0.016584101 seconds Nodal Proj :0.022547606 seconds Reactions :0.126106455 seconds Misc :0.023125142 seconds Base State :0.000818319 seconds Time to advance time step: 0.242135301 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 187875000, 223875000 Time to write plotfile: 0.091938058 Beginning main evolution  Timestep 1 starts with TIME = 0 DT = 0.0005417438695 Cell Count: Level 0, 10240 cells Level 1, 6144 cells Level 2, 18432 cells inner sponge: r_sp , r_tp : 187875000, 223875000 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 942189.5179 MLMG: Initial residual (resid0) = 942189.5179 MLMG: Final Iter. 7 resid, resid/bnorm = 0.0007745461844, 8.220704748e-10 MLMG: Timers: Solve = 0.008012406 Iter = 0.007429893 Bottom = 0.000220387 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 942189.5506 MLMG: Initial residual (resid0) = 1.101719541 MLMG: Final Iter. 1 resid, resid/bnorm = 0.006009219207, 6.377930219e-09 MLMG: Timers: Solve = 0.001839666 Iter = 0.001267126 Bottom = 3.9619e-05 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6499597.232 MLMG: Initial residual (resid0) = 6499597.232 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0002018732594, 3.105934909e-11 MLMG: Timers: Solve = 0.017282122 Iter = 0.016726252 Bottom = 0.000224077 Done calling nodal solver Timestep 1 ends with TIME = 0.0005417438695 DT = 0.0005417438695 Timing summary: Advection :0.048154933 seconds MAC Proj :0.01346342 seconds Nodal Proj :0.022336627 seconds Reactions :0.125033629 seconds Misc :0.023201754 seconds Base State :0.000792326 seconds Time to advance time step: 0.238234102 Call to estdt for level 0 gives dt_lev = 0.4621907805 Call to estdt for level 1 gives dt_lev = 0.3237148621 Call to estdt for level 2 gives dt_lev = 0.2282385675 Minimum estdt over all levels = 0.2282385675 Call to estdt at beginning of step 2 gives dt =0.2282385675 dt_growth factor limits the new dt = 0.0005959182564  Timestep 2 starts with TIME = 0.0005417438695 DT = 0.0005959182564 Cell Count: Level 0, 10240 cells Level 1, 6144 cells Level 2, 18432 cells inner sponge: r_sp , r_tp : 187875000, 223875000 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1393713.485 MLMG: Initial residual (resid0) = 1393713.485 MLMG: Final Iter. 6 resid, resid/bnorm = 0.01301109498, 9.33555937e-09 MLMG: Timers: Solve = 0.007005396 Iter = 0.006415369 Bottom = 0.000177444 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1393713.993 MLMG: Initial residual (resid0) = 4319.004077 MLMG: Final Iter. 4 resid, resid/bnorm = 0.000924996005, 6.636914101e-10 MLMG: Timers: Solve = 0.004901696 Iter = 0.004336101 Bottom = 0.000118195 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 7165134.692 MLMG: Initial residual (resid0) = 7165134.692 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0002226798606, 3.107825186e-11 MLMG: Timers: Solve = 0.017415118 Iter = 0.016855031 Bottom = 0.000232618 Done calling nodal solver Timestep 2 ends with TIME = 0.001137662126 DT = 0.0005959182564 Timing summary: Advection :0.047869176 seconds MAC Proj :0.015543863 seconds Nodal Proj :0.02264015 seconds Reactions :0.125930981 seconds Misc :0.023439354 seconds Base State :0.00094937 seconds Time to advance time step: 0.235684037 Call to estdt for level 0 gives dt_lev = 0.4623016567 Call to estdt for level 1 gives dt_lev = 0.3238059212 Call to estdt for level 2 gives dt_lev = 0.2283160255 Minimum estdt over all levels = 0.2283160255 Call to estdt at beginning of step 3 gives dt =0.2283160255 dt_growth factor limits the new dt = 0.000655510082  Timestep 3 starts with TIME = 0.001137662126 DT = 0.000655510082 Cell Count: Level 0, 10240 cells Level 1, 6144 cells Level 2, 18432 cells inner sponge: r_sp , r_tp : 187875000, 223875000 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 2106885.503 MLMG: Initial residual (resid0) = 2106885.503 MLMG: Final Iter. 6 resid, resid/bnorm = 0.01652645163, 7.84401981e-09 MLMG: Timers: Solve = 0.007369649 Iter = 0.006795357 Bottom = 0.000198418 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 2106886.062 MLMG: Initial residual (resid0) = 501.8146569 MLMG: Final Iter. 3 resid, resid/bnorm = 0.007335910293, 3.481873285e-09 MLMG: Timers: Solve = 0.004248814 Iter = 0.003592923 Bottom = 0.000101536 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 7881715.48 MLMG: Initial residual (resid0) = 7881715.48 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0002477036469, 3.142763114e-11 MLMG: Timers: Solve = 0.017476515 Iter = 0.016920349 Bottom = 0.000231119 Done calling nodal solver Timestep 3 ends with TIME = 0.001793172208 DT = 0.000655510082 Timing summary: Advection :0.047800181 seconds MAC Proj :0.015265557 seconds Nodal Proj :0.022449867 seconds Reactions :0.127775253 seconds Misc :0.023674059 seconds Base State :0.000813941 seconds Time to advance time step: 0.237317636 Writing plotfile 3 inner sponge: r_sp , r_tp : 187875000, 223875000 Time to write plotfile: 0.093338411 Total Time: 2.436095597 Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble_2d_amr_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::amr.plot_file(nvals = 1) :: [reacting_bubble_2d_amr_plt] AMReX (26.09-185-g19d64c697f1a) finalized