Initializing AMReX (26.09-190-g541acefee8d0)... MPI initialized with 2 MPI processes MPI initialized with thread support level 0 OMP initialized with 4 OMP threads AMReX (26.09-190-g541acefee8d0) initialized Calling Setup() Calling ReadParameters() reading extern runtime parameters ... Calling VariableSetup() Calling BCSetup() Calling BaseStateGeometry::Init() Calling Init() Calling InitData() initdata model_File = model.hse.cool.coulomb model file = model.hse.cool.coulomb reading initial model 640 points found in the initial model 6 variables found in the initial model model file mapping, level: 0 dr of MAESTRO base state = 2250000.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 91 radius at r_cutoff 205875000 Maximum HSE Error = 0.006358 (after putting initial model into base state arrays, and for density < base_cutoff_density) model file mapping, level: 1 dr of MAESTRO base state = 1125000.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 182 radius at r_cutoff 205312500 Maximum HSE Error = 0.001719 (after putting initial model into base state arrays, and for density < base_cutoff_density) model file mapping, level: 2 dr of MAESTRO base state = 562500.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 365 radius at r_cutoff 205593750 Maximum HSE Error = 0.000061 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile reacting_bubble_omp_3d_pltInitData after InitData inner sponge: r_sp , r_tp : 187875000, 223875000 Time to write plotfile: 0.778830712 inner sponge: r_sp , r_tp : 187875000, 223875000 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.008510962 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble_omp_3d_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 187875000, 223875000 Time to write plotfile: 0.762754448 Call to firstdt for level 0 gives dt_lev = 0.001900185702 Multiplying dt_lev by init_shrink; dt_lev = 0.001900185702 Call to firstdt for level 1 gives dt_lev = 0.001145985589 Multiplying dt_lev by init_shrink; dt_lev = 0.001145985589 Call to firstdt for level 2 gives dt_lev = 0.0005809423507 Multiplying dt_lev by init_shrink; dt_lev = 0.0005809423507 Minimum firstdt over all levels = 0.0005809423507 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 3375.753789 MLMG: Initial residual (resid0) = 3375.753789 MLMG: Final Iter. 7 resid, resid/bnorm = 2.233905379e-07, 6.617500917e-11 MLMG: Timers: Solve = 0.250809508 Iter = 0.241585599 Bottom = 0.029526814 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.3446506058 Call to estdt for level 1 gives dt_lev = 0.2371958412 Call to estdt for level 2 gives dt_lev = 0.166684761 Minimum estdt over all levels = 0.166684761 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.166684761 Multiplying dt by init_shrink; dt = 0.166684761 Ignoring this new dt since it's larger than the previous dt = 0.0005809423507 Writing plotfile reacting_bubble_omp_3d_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 187875000, 223875000 Time to write plotfile: 0.760642761 Doing initial pressure iteration #1  Timestep 0 starts with TIME = 0 DT = 0.0005809423507 Cell Count: Level 0, 32768 cells Level 1, 24576 cells Level 2, 131072 cells inner sponge: r_sp , r_tp : 187875000, 223875000 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 3473324.294 MLMG: Initial residual (resid0) = 3473324.294 MLMG: Final Iter. 7 resid, resid/bnorm = 0.002037163358, 5.865168887e-10 MLMG: Timers: Solve = 0.180959581 Iter = 0.172953779 Bottom = 0.049955191 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3473321.253 MLMG: Initial residual (resid0) = 152.3934111 MLMG: Final Iter. 3 resid, resid/bnorm = 0.0081935371, 2.358992015e-09 MLMG: Timers: Solve = 0.082367481 Iter = 0.074963212 Bottom = 0.021055565 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.202681385e+10 MLMG: Initial residual (resid0) = 1.202681385e+10 MLMG: Final Iter. 9 resid, resid/bnorm = 0.1560554504, 1.2975627e-11 MLMG: Timers: Solve = 0.314727517 Iter = 0.306361706 Bottom = 0.033442879 Done calling nodal solver Timestep 0 ends with TIME = 0.0005809423507 DT = 0.0005809423507 Timing summary: Advection :0.851033188 seconds MAC Proj :0.30652764 seconds Nodal Proj :0.372207929 seconds Reactions :1.127783003 seconds Misc :0.229838034 seconds Base State :0.006033126 seconds Time to advance time step: 2.892611996 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 187875000, 223875000 Time to write plotfile: 0.754141921 Beginning main evolution  Timestep 1 starts with TIME = 0 DT = 0.0005809423507 Cell Count: Level 0, 32768 cells Level 1, 24576 cells Level 2, 131072 cells inner sponge: r_sp , r_tp : 187875000, 223875000 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 807172.7048 MLMG: Initial residual (resid0) = 807172.7048 MLMG: Final Iter. 6 resid, resid/bnorm = 0.005743229412, 7.11524235e-09 MLMG: Timers: Solve = 0.150267242 Iter = 0.142696073 Bottom = 0.037394514 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 807172.7226 MLMG: Initial residual (resid0) = 0.8173157721 MLMG: Final Iter. 2 resid, resid/bnorm = 0.0002825093979, 3.49998693e-10 MLMG: Timers: Solve = 0.055075943 Iter = 0.047646325 Bottom = 0.011343789 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6986896.693 MLMG: Initial residual (resid0) = 6986896.693 MLMG: Final Iter. 9 resid, resid/bnorm = 9.065831546e-05, 1.297547673e-11 MLMG: Timers: Solve = 0.317179314 Iter = 0.30882135 Bottom = 0.036813686 Done calling nodal solver Timestep 1 ends with TIME = 0.0005809423507 DT = 0.0005809423507 Timing summary: Advection :0.846875614 seconds MAC Proj :0.24807227 seconds Nodal Proj :0.374481542 seconds Reactions :1.130224126 seconds Misc :0.210167282 seconds Base State :0.005982702 seconds Time to advance time step: 2.814751094 Call to estdt for level 0 gives dt_lev = 0.4121759495 Call to estdt for level 1 gives dt_lev = 0.2828508336 Call to estdt for level 2 gives dt_lev = 0.1985511167 Minimum estdt over all levels = 0.1985511167 Call to estdt at beginning of step 2 gives dt =0.1985511167 dt_growth factor limits the new dt = 0.0006390365858  Timestep 2 starts with TIME = 0.0005809423507 DT = 0.0006390365858 Cell Count: Level 0, 32768 cells Level 1, 24576 cells Level 2, 131072 cells inner sponge: r_sp , r_tp : 187875000, 223875000 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 985752.4458 MLMG: Initial residual (resid0) = 985752.4458 MLMG: Final Iter. 6 resid, resid/bnorm = 0.005930160522, 6.015871984e-09 MLMG: Timers: Solve = 0.150628264 Iter = 0.14306008 Bottom = 0.037649813 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 985752.8287 MLMG: Initial residual (resid0) = 10430.2617 MLMG: Final Iter. 4 resid, resid/bnorm = 0.001045146645, 1.06025224e-09 MLMG: Timers: Solve = 0.106868875 Iter = 0.099589083 Bottom = 0.02657168 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 7717168.504 MLMG: Initial residual (resid0) = 7717168.504 MLMG: Final Iter. 9 resid, resid/bnorm = 9.889330249e-05, 1.281471338e-11 MLMG: Timers: Solve = 0.317562205 Iter = 0.309285062 Bottom = 0.036102161 Done calling nodal solver Timestep 2 ends with TIME = 0.001219978937 DT = 0.0006390365858 Timing summary: Advection :0.844925957 seconds MAC Proj :0.300603029 seconds Nodal Proj :0.37527651 seconds Reactions :1.131609782 seconds Misc :0.209529834 seconds Base State :0.005903729 seconds Time to advance time step: 2.862303513 Call to estdt for level 0 gives dt_lev = 0.4123222065 Call to estdt for level 1 gives dt_lev = 0.2829378818 Call to estdt for level 2 gives dt_lev = 0.1986205547 Minimum estdt over all levels = 0.1986205547 Call to estdt at beginning of step 3 gives dt =0.1986205547 dt_growth factor limits the new dt = 0.0007029402444  Timestep 3 starts with TIME = 0.001219978937 DT = 0.0007029402444 Cell Count: Level 0, 32768 cells Level 1, 24576 cells Level 2, 131072 cells inner sponge: r_sp , r_tp : 187875000, 223875000 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1182346.252 MLMG: Initial residual (resid0) = 1182346.252 MLMG: Final Iter. 6 resid, resid/bnorm = 0.007110082894, 6.013536968e-09 MLMG: Timers: Solve = 0.151925021 Iter = 0.144618109 Bottom = 0.039199857 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1182346.671 MLMG: Initial residual (resid0) = 1095.719418 MLMG: Final Iter. 4 resid, resid/bnorm = 0.001084463227, 9.172125683e-10 MLMG: Timers: Solve = 0.101249186 Iter = 0.09388926 Bottom = 0.021048204 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 8489041.404 MLMG: Initial residual (resid0) = 8489041.404 MLMG: Final Iter. 9 resid, resid/bnorm = 0.0001069712453, 1.260109831e-11 MLMG: Timers: Solve = 0.317537583 Iter = 0.309138175 Bottom = 0.035680563 Done calling nodal solver Timestep 3 ends with TIME = 0.001922919181 DT = 0.0007029402444 Timing summary: Advection :0.847514125 seconds MAC Proj :0.296039906 seconds Nodal Proj :0.37510623 seconds Reactions :1.126436094 seconds Misc :0.212594056 seconds Base State :0.005982513 seconds Time to advance time step: 2.858017493 Writing plotfile 3 inner sponge: r_sp , r_tp : 187875000, 223875000 Time to write plotfile: 0.758386015 Total Time: 17.19080469 Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble_omp_3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::amr.plot_file(nvals = 1) :: [reacting_bubble_omp_3d_plt] AMReX (26.09-190-g541acefee8d0) finalized