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December 2010 News


2011 INCITE Awards -- CCSE and Collaborators Awarded 90 Million Hours

U.S Energy Secretary Steven Chu today announced the largest ever awards of the Department's supercomputing time to 57 innovative research projects. CCSE and collaborators earned two of these coveted awards.

The first award, titled "Simulation of Turbulent Lean Hydrogen Flames in High Pressure", with PI John Bell and Co-I Marc Day, was awarded 40 million hours. The second award, titled "Petascale Simulations of Type Ia Supernovae from Ignition to Observables", with PI Stan Woosley of UCSC and Co-I's John Bell and Mike Zingale of Stony Brook University, was awarded 50 million hours. The average allocation was 27 million hours.

"The Department of Energy's supercomputers provide an enormous competitive advantage for the United States," said Secretary Chu. "This is a great example of how investments in innovation can help lead the way to new industries, new jobs, and new opportunities for America to succeed in the global marketplace."

INCITE

CCSE Code Plays a Key Role in NSF-Funded HBCU-RISE AMCA Center

In 2006, when Yevgenii Rastigejev was a postdoc at Northwestern University, he used CCSE's IAMR code as the framework for a level set method he developed to study the nonlinear development of hydrodynamically unstable premixed flames.

Fast-forward a few years and Dr. Rastigejev is now Professor Rastigeyev, an assistant professor with a joint appointment in the Dept. of Mathematics and in Energy and Environmental Studies at North Carolina A&T State University. He, with his collaborator, Dr. Tang, have just been awarded a $1M HBCU-RISE grant by NSF to fund a three-year research mini-center, the Center for Advanced Multi-scale Computational Algorithms (AMCA).

A key part of the proposal involves using AMR methods for atmospheric chemical transport modeled by advection-diffusion-reaction equations. For this part, the new center will use an adaptive advection code developed by CCSE, and based on the common software framework shared by IAMR and CASTRO. In addition, CCSE will collaborate with the new center in the training of students on adaptive mesh methods for solving the advection/diffusion/reaction equations.


November 2010 News


CCSE Visualizations Prominently Featured as Live Demos in the Berkeley Lab's Booth at SC10

Four of these movies can already be seen on the CCSE's web page. These include movies made from simulations using CCSE's CASTRO and MAESTRO software, that are being shown on the 24-inch Magic Planet globe at SC10. In addition, the movies of buoyant burning bubbles in Type Ia supernovae and of turbulent jets with off-source heating will be shown as live demos. Finally, a new movie courtesy of LBL's David Camp and Hank Childs, based on simulations by Jason Nordhaus and Adam Burrows of Princeton University as well as Ann Almgren and John Bell of CCSE, is available to see here.






What Do These Postcards Have In Common?

One is called "Supercomputers Dissect the Fiery Death Throes of a Dying Star to Understand the Origin of the Elements, Pulsars and Black Holes?"

The other is titled "Supercomputers Peer Into the Heart of a Flame to Help Scientists Build More Fuel-Efficient Burners."

What do they have in common?

The answer is CCSE.

These are two of the four colorful Computing Sciences postcards being given out at Berkeley Lab's SC10 booth. Each card features Department of Energy sponsored science results that were powered by NERSC supercomputers.

The supernova postcard shows results of a simulation performed by Jason Nordhaus and Adam Burrows at Princeton University using CCSE's CASTRO code.

The combustion postcard shows a simulation by CCSE's own Marc Day, John Bell and Mike Lijewski.


Aspden to Speak at the 63rd Annual Meeting of the APS Division of Fluid Dynamics

Andy Aspden, will be speaking at the 63rd Annual Meeting of the APS Division of Fluid Dynamics held November 21-23, 2010, in Long Beach, CA, on "Three Dimensional Simulations of Burning Thermals."


October 2010 News


CASTRO Image Named `Image of the Week' on International Science Grid This Week (iSGTW)

From iSGTW:

When large stars die out and collapse, they explode, creating a supernova. But when scientists attempted to simulate this process, they got a "fizzle" instead of a "bang." Until now, scientists simply assumed that there is something fundamental about the physics of supernovae that we didn't understand. Now scientists may have cracked the problem by using a new approach to create computer simulations of supernovae. "The new simulations are based on the idea that the collapsing star itself is not sphere-like, but distinctly asymmetrical and affected by a host of instabilities in the volatile mix surrounding its core" explained a recent press release. "Writing in the Sept. 1 issue of the Astrophysical Journal, Jason Nordhaus and Adam Burrows of Princeton University, and the Lawrence Berkeley National Laboratory's Ann Almgren and John Bell report that the new simulations are beginning to match the massive blow-outs astronomers have witnessed when gigantic stars die." Although jokes are often told about the physicist's propensity for assuming everything is a sphere, they do this with good reason: more complex models are costly to simulate, in terms of computational resources. This research was conducted on the National Energy Research Scientific Computing Center's Cray XT4 Franklin system, using CASTRO, a program developed by Almgren and Bell, and according to the press release, it wouldn't have been possible without access to a high performance computing facility. For more information, visit the original press release.


John Bell Gives Invited Talk at Courant Institute

John Bell is giving an invited talk on Friday, October 29, at the Courant Institute of Mathematical Sciences in New York City. His talk is titled "Low Mach Number Models in Computational Astrophysics" and discusses work by Bell and others on developing and using a low Mach number model for astrophysical flows. For more information about the low Mach number model and the code based on it, see the MAESTRO page.




CCSE Research Featured in LBL Carbon Cycle 2.0 Website on Computational Research for the Environment at LBL



Two of seven stories on Computational Research for the Environment at LBL feature CCSE research. The first, titled "Carbon Goes Underground, Then What? 3-D Simulations Shed Light on Fate of Geologically Sequestered CO2", discusses research by George Pau and John Bell on carbon sequestration. The second, titled "Experiments and Simulations Join Forces to Engineer a New Type of Clean, Efficient Burner" discusses recent work by John Bell and Marc Day, in collaboration with Robert Cheng.


September 2010 News


CASTRO simulations featured in Time Magazine (Time.com)

Most stars end their lives in a whimper - our own sun will almost certainly be one of them - but the most massive stars go out with an impressive bang. When that happens, creating what's known as a Type II supernova, the associated blast of energy is so brilliant that it can briefly outshine an entire galaxy, give birth to ultra-dense neutron stars or black holes, and forge atoms so heavy that even the Big Bang wasn't powerful enough to create them. If supernovas didn't exist, neither would gold, silver, platinum or uranium. The last time a supernova went off close enough to earth to be visible without a telescope, back in 1987, it made the cover of TIME.... more




Photo courtesy of Hank Childs, LBNL







CASTRO simulations featured in press releases by Princeton University and Berkeley Lab.

For scientists, supernovae are true superstars -- massive explosions of huge, dying stars that shine light on the shape and fate of the universe. Recorded observations of supernovae stretch back thousands of years, but only in the past 50 years have researchers been able to attempt to understand what's really happening inside a supernova via computer modeling. These simulations, even crude ones, can lead to new information about the universe's size and eventual fate and help address longstanding problems in astrophysics.

Now, researchers from Princeton University and the Lawrence Berkeley National Laboratory have found a new way to make computer simulations of supernovae exploding in three dimensions. The new simulations are based on the idea that the collapsing star itself is not sphere-like, but distinctly asymmetrical and affected by a host of instabilities in the volatile mix surrounding its core.

Writing in the Sept. 1 issue of the Astrophysical Journal, Jason Nordhaus and Adam Burrows of Princeton University, and the Lawrence Berkeley National Laboratory's Ann Almgren and John Bell report that the new simulations are beginning to match the massive blow-outs astronomers have witnessed when gigantic stars die... more


August 2010 News


Aspden and Day present at the 33rd International Symposium on Combustion

Andy Aspden and Marc Day are presenting three papers at the 33rd International Symposium on Combustion being held in Beijing, China, August 1-6.

Aspden is presenting "Characterization of Low Lewis Number Flames" and "Lewis Number Effects in Distributed Flames", both co-authored with Marc Day and John Bell of CCSE.

Day is presenting "Numerical Simulation of Nitrogen Oxide Formation in Lean Premixed Turbulent Flames", co-authored with John Bell and Xinfeng Gao of CCSE, and Peter Glarborg of the Technical University of Denmark.


July 2010 News


Almgren and Day participate in Computing Sciences Outreach to Local High School Students

Marc Day and Ann Almgren gave presentations about their work on combustion and astrophysics to local high school students on Thursday, July 29, as part of an outreach program to introduce students to various career options in scientific computing and networking. The program was developed with input from computer science teachers at Berkeley High, Albany High, Kennedy High (in Richmond), and Oakland Tech.


Bell presents at the SciDAC 2010 Conference

John Bell presented two CCSE posters the SciDAC 2010 Conference held July 12-16, 2010, in Chattanooga, Tennessee. The posters were

  • MAESTRO, CASTRO, and SEDONA: Petascale Codes for Astrophysical Applications,by Ann Almgren, John Bell, Mike Lijewski, Andy Nonaka, Peter Nugent, and Rollin Thomas of CRD; Daniel Kasen of UC Santa Cruz; Charles Rendleman of D. E. Shaw Research; and Michael Zingale of Stony Brook University
  • and
  • Simulation of Nitrogen Emissions in a Low Swirl Burner,by John Bell, Marc Day, Xinfeng Gao, and Mike Lijewski of CRD

CAC Movie Wins "OASCR" at SciDAC 2010 Visualization Night

At this same meeting, CCSE collaborators won an "OASCR" at the SciDAC 2010 Visualization night for "Type Ia Supernova: Turbulent Combustion at the Grandest Scale," which was produced for the SciDAC Computational Astrophysics Consortium by the NERSC Analytics Team and VACET, with Hank Childs in the lead. Calculations using the CASTRO code were run on Franklin at NERSC and Jaguar at OLCF by Haitao Ma and Stan Woosley of UC Santa Cruz, and John Bell, Ann Almgren, and Andy Nonaka of CCSE. Here is a summary:

Deep inside a dying star in a galaxy far, far away, a carbon fusion flame ignites. Ignition may happen in the middle or displaced slightly to one side, but this simulation explores the consequences of central ignition. In a localized hot spot, represented here by a deformed sphere with an average radius of 100 km, carbon is assumed to have already fused to iron, producing hot ash (~10 billion K) with a density about 20% less than its surroundings. As the burning progresses, this hot buoyant ash rises up and interacts with cold fuel. Rayleigh-Taylor fingers give rise to shear and turbulence, which interacts with the flame, causing it to move faster. In about 2 seconds, the energy released blows the entire white dwarf star up, leaving nothing behind but a rapidly expanding cloud of radioactive nickel, iron, and other heavy elements. A Type Ia supernova is born.


Pau presents at the Gordon Research Conference

George Pau presented a talk titled "High Resolution Simulation of Flows Encountered in Geologic CO2 Sequestration" at the Gordon-Kenan Research Seminar on Flow and Transport in Permeable Media held in Lewiston, Maine on July 10-11, 2010. He also presented a poster titled "Adaptive Mesh Refinement for Two-Phase Compressible Flow in Porous Media" at the Gordon Research Conference on Flow and Transport in Permeable Media held at the same location on July 11-16, 2010.


May 2010 News



Aleksandar Donev Speaks at SIAM Meeting on Mathematical Aspects of Materials Science

Alvarez Fellow Aleksandar Donev gave an invited talk in the minisymposium on Coarse-Grained Stochastic Models in Soft Condensed Matter on Sunday, May 23. His talk was titled, ``A Hybrid Particle-Continuum Method for Hydrodynamics of Complex Fluids,'' and discussed joint work with John Bell, Alejandro Garcia, and Berni Alder. Donev was also an organizer of the two-part minisymposium series.


CCSE People and Codes Featured at SciDAC Computational Astrophysics Consortium Meeting

Nine of the talks at the SciDAC Computational Astrophysics Consortium Meeting held May 19-21, 2010, featured speakers and/or codes from CCSE. Talks were given by CCSE members, and by CCSE collaborators,
  • Louis Howell -- Radiation transport in CASTRO
  • Mike Zingale -- Ignition of Type Ia Supernovae using MAESTRO

In addition, collaborators Haitao Ma, Candace Joggerst, Ken Chen and Adam Burrows gave talks about their 3D simulations using CASTRO.

Both MAESTRO and CASTRO are codes developed in CCSE as part of the SciDAC Computational Astrophysics Consortium.


CCSE Presence at 2010 DOE Applied Mathematics Program Meeting

With a total of six contributions -- two talks and four posters -- CCSE was well represented at the 2010 DOE Applied Mathematics Program Meeting, held May 3-5, 2010, in Berkeley, CA. Talks were given by
  • Andy Nonaka -- AMR for Low Mach Number Modeling of Stratified Flows (joint with Ann Almgren, John Bell, Mike Lijewski, Mike Zingale, Chris Malone)
  • Aleksandar Donev -- On the Accuracy of Finite-Volume Schemes for Fluctuating Hydrodynamics. (joint with John Bell, Alejandro Garcia, Eric Vanden-Eijnden, Jonathan Goodman)
Posters were presented by
  • Andrew Aspden --Convective Pattern Formation During Rotation Spin-Up,
  • Marc Day -- Transition from Cellular to Distributed Burning in Lean Hydrogen-Air Flames (joint with John Bell and Andrew Aspden),
  • Alejandro Garcia -- A Hybrid Particle-Continuum Method for Hydrodynamics of Complex Fluids, (joint with Aleksandar Donev, John Bell and Berni Alder)
  • George Pau -- High Resolution Simulation and Characterization of Flows Encountered in Geologic CO2 Sequestration (joint with John Bell, Karsten Pruess, Ann Almgren and Mike Lijewski)


April 2010 News


CASTRO Poster Wins MSI Poster Award

The poster by Ke-Jung Chen, Alexander Heger, Ann Almgren and Shuxia Zhang, "Simulations of Thermonuclear Supernovae of Very Massive Stars," was one of the winners in the MSI 25th Anniversary Research Exhibition poster contest.


February 2010 News



Ann Almgren Speaks at SIAM Conference on Parallel Processing and Scientific Computing

Ann Almgren gave an invited talk in the Parallel Computing of Fluids and Interfaces minisymposium at the SIAM Conference on Parallel Processing and Scientific Compouting (PP10) meeting in Seattle on Thursday, February 25. Her talk was titled ``Parallel Adaptive Simulation of Low Mach Number Flows" and discussed joint work with John Bell, Andy Nonaka. and Mike Zingale.


Talk by Alvarez Fellow Aleksandar Donev at UC Berkeley

Alvarez Fellow Aleksandar Donev gave an invited talk in the applied mathematics seminar at UC Berkeley on Thursday, February 4. His talk was titled, ``A Hybrid Particle-Continuum Method for Hydrodynamics of Complex Fluids,'' and discussed joint work with John Bell, Alejandro Garcia, and Berni Alder.



January 2010 News



Alvarez Fellow Aleksandar Donev Speaks at UC Santa Barbara

Alvarez Fellow Aleksandar Donev gave an invited talk in the applied mathematics seminar at UC Santa Barbara on Friday, Jan. 29. His talk was titled, ``A Hybrid Particle-Continuum Method for Hydrodynamics of Complex Fluids,'' and discussed joint work with John Bell, Alejandro Garcia, and Berni Alder.


Bell and Garcia chosen to organize 2011 von Neumann Symposium

AMS has announced that the 2011 von Neumann Symposium will be "Multimodel and Multialgorithm Approaches to Multiscale Problems," organized by John Bell of CCSE and Alejandro Garcia of San Jose State University. Multiscale problems are of increasing importance in the fields of physics, biology, chemistry, fluid dynamics, environmental science, materials science, geophysics, and all branches of engineering. The symposium will bring groups together in four key areas (fluids, solids, earth sciences, and molecular dynamics), and will enable applied mathematicians and scientists to discuss current practices and future research directions in the development of hybrid methodologies for multiscale phenomena. The AMS von Neumann Symposia are made possible by the generous support of a fund established by Dr. and Mrs. Carrol V. Newsom in honor of the memory of John von Neumann. See ams.org for the official annoncement.

Four posters on MAESTRO and CASTRO at January AAS Meeting

Andy Nonaka and Ann Almgren of CCSE, and Stony Brook University collaborators Mike Zingale and Chris Malone presented four posters on MAESTRO and CASTRO at the recent American Astronomical Society (AAS) Meeting in Washington D.C., January 3--7, 2010. Almgren's poster described the recent code development of CASTRO and showed 3D results by collaborators Candace Joggerst and Jason Nordhaus. Nonaka's poster described the code development of MAESTRO, while Zingale's and Malone's poster presented results of recent MAESTRO simulations, one of rotating Type Ia supernovae and the other of X-ray bursts. The pdf of each poster can be found by clicking on the image above.

Almgren participates in AWM Workshop Panel Discussion on Career Opportunities

On Saturday, January 16, Ann Almgren is speaking as an invited participant in an AWM "Career Opporuntities: The Early Years" panel. The special panel is being held in San Francisco as part of the Joint Mathematics Meetings, January 13-16, 2010.





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